Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             ------->TEIL                                                                                        <---------ANAC58                                                                                        <---------ANAC46                                                                                        <---------ANAC55(2)                                                                                     <---------MYB52(1)                                                                                ------------>AtMYB77                                                                                <-----------HVH21   <                                                                                <---------PCF2      -                                                                               <------MYB46(1)      <                                                                               <------MYB83<---------ARR14(2)                                                                              <---------MYB46(3)   <-                                            ----------->GT1           <---------GLK1(2) <---------ANAC55(1)                                            <---------MYB46(3)        --------->ARR11(3)<---------ANAC58                                      <---------ANAC46                <---------ARR11(3)--------->ANAC55(2)                 <-----------GT1      <---------ANAC58          <---------AHL20(2)  <-------GAMYB <--             <----------DOF2          <---------ANAC58         --------->AHL20(2)  --------->MYB52(2)     <---------ZAT6            --------->YAB1             <---------ANAC58    --------->MYB55(2)----- ---DOF2  <---------YAB1       --------->TOE2(3)          <---------ANAC58<---------AtMYB61--------->ARR14(2)   gtaactagagttattcttttttctcactatctatcttattccttgtttgttaaatctattgcgaatttaaaagattttggtgggtcagttacgtatatgg  11863400                                                                       -------->ATHB1                                                                       <--------HAHB4                                                                       --------->ATHB12                                                                       --------->ATHB51                                                                       <---------ICU4                                                                       --------->AHL20(2)                                                                       <---------AHL20(2)  --------->TOE2(3)      <---------TOE1(3)                                               <---------ATHB12     <---------MYB59      <---------TOE2(3)            <-------GAMYB                      <---------ATHB51<------MYB46(1) ------MYB46(1)                   <------MYB46(1)              --------->RVE1(1)      <------MYB83 ---------->GT1                   <------MYB83                 --------->CCA1(1)     --------->MYB111(1) ------MYB83                      ----------->GT1          <---------AHL20(2)        --------------->AtSPL8 --------AtMYB61                  <---------MYB46(3)       --------->AHL20(2)        <---------------AtSPL8 -------WOX13(1)       <----------DOF2                   <---------AHL20(2)          --------->MYB46(2) ---->ATHB12    <----------DOF2 <--------P         ----------->GT1    --------->ICU4 --------->MYB59   attggtttaaagtttagactttagacttttgagagttggttataacatacaaatggtatataaaaatatccaattatttggaagagtttggtacctaaaa  11863500                                                                              --------->AHL20(1)                                                                              --------->AHL20(2)                                                                              <---------AHL20(1)                                                                              <---------AHL20(2)                                                                         --------->AHL20(2)                                                                   --------->TOE2(3)                                                                 --------->AHL20(1)                                                                 --------->ARR11(3)                                                                 <---------ARR11(3)                                                                --------->RVE1(1)      --------->YAB1                                                          --------->TOE2(3)  --------->AHL20(2)                                                        ------->TEIL     <---------AHL20(2)                             <-----------GT1        --------------->AtSPL8   <---------AHL20(2)                    ------->TEIL<---------DAG2      <---------------AtSPL8--------->AHL20(2)         ---------->DOF2   ------>ZmHOX2a(2)  <----------DOF2   --------->CCA1(1)    XXXXXXXXXXXXXXXX   tactataaaacaaaagtagatggatgtgatctaacctttcccttgctacttttatatgtaccataaatatcttaaataaataaattggatgataaacaaa  11863600                                                             --------->DAG2                                                     --------->AHL20(2)                                                     <---------AHL20(2)                                                    --------->AHL20(2)                             --                                                   <---------YAB1                                 ---                                                <---------YAB1                                    <--                                                --------->ICU4                                    ---                                             <---------TOE2(3)                                ------- XXXX>MIR851-3P                         <<<<<<<<<<MYB80     ---------->DOF2              <---------WOX13(1)   tacaatttgagttgcataaatttagggattaatatggattttggtttgagattattaaaaaaaaaagtgagactattcaagaaaaatttggattgaaaaa  11863700                                                         --------->At4g35610                                                         <------MYB83                                                         <------MYB46(1)                                                        --------->MYB46(2)                                                        --------->MYB111(1)                                                        --------->MYB59                                                     <------MYB83                                                     <------MYB46(1)                                                    --------->MYB59                                                    --------->MYB55(2)                                                    --------->MYB46(2)                                                    --------->MYB111(2)                                                    <---------MYB46(3)                     --------->ANAC58                                                    --------->MYB111(1)                    --------->ANAC58               <---------ANAC58        --------->ANAC58 --------->MYB111(2)         --------->KAN4(1)               <---------ANAC58        --------->ANAC58<--------P                   <---------KAN4(1)    <---------bZIP60(1)                <---------ANAC55(2)                         <---------YAB1    --------->bZIP60(1)                --------->ANAC55(2)                         <------ZmHOX2a(2) ----------->HVH21                <---------ICU4   <--------P   --------->MYB52(1) ================== ------->CCA1(2)               <---------ALFIN1  <---------MYB46(3)                ================== ------>ARR11(1)            --------->PCF2       --------->MYB55(2) <-----------HVH21--------->KAN4(2) -------ARR11(3)   <---------CCA1(2)   --------->ANAC46<---------MYB55(1)         <---------ARR11(3) ------>ARR11(3) <---------CCA1(2)--------->AtMYB61<---------MYB55(1)             --------->ARR11(3)- --->DOF2<---------MYB52(1)<-----------TCP11(1) <---------AtMYB61   --------->At5g28300    --------->ANAC46   gatatgacatcgtttgggcttatctctcttggcccaccattacgcaaatggtggtaggtaggtgaagaacggtgagaggcacaagatcattccacgctct  11863800                                                                              --------->AHL20(2)             --------->YAB1                                                   <---------AHL20(2)          ------>ZmHOX2a(1)                                        --------->TOE1(3) ================HOX2a_HOX2a                                       --------->TOE2(3)               -- ======HOX2a_HOX2a   <---------ALFIN1                --------->HSFB2a(2)   --------->AHL20(2)      -- ----->ZmHOX2a(1) --------->MYB46(3)         *TSS    <---------HSFB2a(2)  --------->AHL20(2) XXXXXXXX   tcctctcttctcctataacaacaacactcttcacttactcttaaacaaaacatttccataaccaaaaaacctcaaaataaaaaaatgagaactctcttac  11863900                                            <-----------HVH21                                            <-----------TGA1                                           --------->ANAC55(1)                              <---------ANAC46                             <------NtERF2 ============================================bZIP_DOF                            ------>NtERF2  --------->ANAC55(2)                            <---------DEAR4(2)                      --------->CCA1(2)                            <---------ERF1 --------->TGA1a          <---------At4g35610                            <---------RAP2.3(1)                     <------ZmHOX2a(2)                            <---------ATERF1(1)                     --------->At4g35610                           <---------DEAR3(1)                      <---------ARR14(2)                           <---------RAP2.3(2)                     --------->AGP1                           --------->DEAR3(1)                      <---------AGP1                           <---------ANAC46--------->ANAC58        --------->ARR11(3)                           <---------RAP2.3(3)           <---------LBD16                           <---------RRTF1(3)            <------NtERF2----------->HVH21                 --------->At5g28300       --------->O2 ------>NtERF2------>ZmHOX2a(2)                 --------->DOF5.7(2)       <---------ANAC55(2)     --------->ARR14(2)                ----------->GT1            <---------TGA1a<---------ATERF1(2)                =====================================MYC_MYB       <---------ARR11(3)          --------->LBD16 <---------ABI4(1)--------->bZIP60(2)    --------->GLK1(1)          ------>NtERF2  ------->GAMYB     <---------O2 <---------RRTF1(1)                      -----        <---------LBD16  ============================MYC_MYB      <---------GLK1(1)          <-------    <---------ALFIN1  --------->MYB52(1)   --------->ANAC46 <---------MYB52(1)             --------->HSFB2a(2) ---->MYB83  --------->MYB52(1)            --------->ANAC58<---------DEAR3(2)        --------->AHL20(2) ---->MYB46(1)  ------->GAMYB--------->ATERF1(1)        <---------RAP2.3(1) <----------DOF2<---------HSFB2a(2) XXXXXXXXXXXX>MIR4239--------->MYB46(3)   <-----------STF1--------->ATERF1(2)       <---------MYB52(1)   cttcccatactccggcaacggtaacaacggcggcgagaagaagacacgtcatacattgcgccggtaagagatctgactctttctccattaattccagtag  11864000                                                                                                    <                                                                                                   --                                                                  <---------ARR11(3)           ------                                                                 <---------CCA1(2)             ------                   ------>NtERF2                                ============================HOX2a_HOX2a                  --------->ANAC46                              ------>ZmHOX2a(1)              ------                <---------ATERF1(1)                            --------->TOE2(3)              ------>ZmHOX2a(1)        ---------->DOF2        --------->ANAC46                --------->TOE1(3)        <---------YAB1   <---------WOX13(1)          --------->ANAC58             <---------ARR14(2)        --------->YAB1-  <---------MYB52(1)           --------->ANAC58             --------->ARR14(2)       <------ZmHOX2a(2) ---->At4g35610 ------>ZmHOX2a(1)                       --------->YAB1               ================HOX2a_HOX2a --MYB52(1)   ----------->RAV1(2) ---------->DOF2     --------->GLK1(2)          <---------ATHB12<---   ctccgattggcaaagctcctgcgccattctctcaagcaaagttaactcacaagaacaatctgaatccttatcttccaattccaatggatcatcatcctac  11864100                <-----------HVH21           <---------WRKY12        <---------GLK1(2)          --------->DOF5.7(2)     <------NtERF2         ------>NtERF2           --------->LBD16         <-----------HVH21      --------->DEAR3(1)        --------->ATERF1(2)    --------->ATERF1(1)        --------->RAP2.3(2)    <---------LBD16        <---------ATERF1(2)    --------->RAP2.3(1)        --------->DEAR3(1)    ------>NtERF2        --------->RAP2.3(3)   <---------RRTF1(1)        --------->RRTF1(2)    <---------ATERF1(1)        --------->RRTF1(3)    <---------RAP2.6(1)        --------->RAP2.6(2)  <---------RAP2.3(2)       --------->RRTF1(1)    <---------DEAR3(1)       --------->ERF1        --------->DEAR3(1)                            <---------ATHB12      --------->LBD16       --------->RAP2.3(1)                           ------>MYB83      ------>NtERF2         <---------ABI4(2)                             ------>MYB46(1)    <---------LBD16        <---------ATERF1(1)                          --------->AtMYB61  <---------ARR14(2)       <---------RAP2.3(1)                         --------->MYB46(3)  --------->ARR14(2)       ------->GAMYB                              --------->ANAC58 -------MYC3<---------DOF5.7(2)<------NtERF2                          --------->ANAC58 ------->O2<---------WRKY38(1)<---------ERF1                         ------->GAMYB >MYB83--------->RAP2.3(1)<---------DEAR3(1)                        --------->MYB46(3) >MYB46(1)<------NtERF2 --------->MYB52(1) <---------ARR14(2)       <---------MYB111(2) -->P--------->ANAC46  --------->MYB46(3)  --------->ARR14(2)       <---------MYB55(2) ------>MYC3--------->MYB52(1)<---------RAP2.3(1)           --------->AtLEC2                       -- ------ALFIN1  ------->GAMYB--------->ATERF1(1)  ------->TEIL    --------->MYB46(3)            <-----   cacgtttccgccgtcaacggtcacaacaacggcgccggagtctcagatttgaatctagttccattcaacaacaaccaatcgattcaatcgaagaagcctt  11864200                                                                                         <---------At4g35610                                                                                         --------->At4g35610                                                                                         ------>NtERF2                                                                                        --------->DEAR3(1)                                                                                       --------->RAP2.3(1)                                                                                       <------NtERF2                                                                                       --------->ATERF1(1)                                                                                       --------->DEAR4(2)                                                                                      <---------DEAR4(2)                                                                                      <---------RAP2.3(1)                                                                                      ------>NtERF2                                                                                      <---------ATERF1(1)                     --------->ARR14(2)                                              --------->ANAC46                    --------->At4g35610                                              --------->RAP2.3(2)                    <---------At4g35610                                             --------->DEAR3(2)                    <---------ZAT2                                                  --------->ATERF1(1)           ------>ZmHOX2a(2)                      <---------At4g35610               --------->RAP2.3(1)         <---------ARR14(2)                    --------->REM1(2)       --------->ZAT2--------->RAP2.6(2)         <---------AGP1                  --------->TOE2(2)             --------->At4g35610         --------->AGP1             <---------MYB59<---------ANAC58    <---------At4g35610         --------->ARR14(2)         ------>ZmHOX2a(2)               --------->LBD16 --------->ERF1         <---------ARR11(3)       <---------AGP1<---------CCA1(2)  --------->LBD16<---------ARR14(2)         --------->ARR11(3)       <-----------ARR10<---------ANAC58--------->ANAC46<---------ATERF1(1)         <-----------ARR10   <---------AtLEC2--------->LBD16      <---------HSFB2a(2)<---------DEAR3(1)        <---------CCA1(2)--------->At4g35610<---------ANAC46      <---------LBD16 --------->ARR14(2) ------->ANAC55(2)  --------->ZAT2------->TEIL--------->ALFIN1    --------->HSFB2a(2)--------->DEAR3(1) -----DOF2<------ZmHOX2a(2) <-------TEIL--------->MYB46(3)   --------->ALFIN1   --------->LBD16------   taagtatttcagatctatctccagctccgatgcatggatctaacctccgtgtagcttatcaaggtgttcccggagcttactccgaagccgccgctggtaa  11864300  Previous    Next  AGI:  At2g27810.1    Description:  xanthine/uracil permease family protein. Identical to Nucleobase-ascorbate transporter 12 (NAT12) [Arabidopsis Thaliana] (GB:Q3E7D0;GB:Q8LPL9;GB:Q9ZUY2); similar to transmembrane transporter [Arabidopsis thaliana] (TAIR:AT4G38050.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ82508.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16687.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ63559.1); contains InterPro domain Xanthine/uracil/vitamin C permease; (InterPro:IPR006043) Range:  from: 11859157    to: 11863368    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g27820.1    Description:  PD1 (PREPHENATE DEHYDRATASE 1); arogenate dehydratase/ prephenate dehydratase. similar to ADT6 (AROGENATE DEHYDRATASE 6), arogenate dehydratase/ prephenate dehydratase [Arabidopsis thaliana] (TAIR:AT1G08250.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68383.1); similar to unknown [Populus trichocarpa] (GB:ABK95815.1); contains InterPro domain Prephenate dehydratase; (InterPro:IPR001086) Range:  from: 11863845    to: 11865365    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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