Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->HSFC1(2)                  --------->ZAT18         --------->ARR11(3)          <---------ANAC58         --------->ICU4          <---------ANAC58    <----------DOF2          <---------ANAC46----------->HVH21 <---------HSFC1(2)  <-----------RAV1(1)   --------->O2      <---------ARR11(3)          <---------ANAC58 ---->ANAC58      <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       --------->GLK1(2)    <---------TOE2(3) ---->ANAC46   <---------ANAC58    <---------YAB1    --------->DAG2   <---------ANAC46            <-- ---->ANAC58   <---------ANAC58  --------->YAB1     ---------->DOF2   <---------ANAC58    --------->ICU4   gccattgttgttgtgtggattgcaccatgtgactttgatgatgagatgtttcgataaagtgattctgtagatgcttgtaatggaggtttgtattgatggt  11841000                                                  --------->ICU4                                                  <---------YAB1                          <------MYB83          --------->YAB1                         <---------------AtSPL8--------->ICU4     --------->YAB1              <-------TEIL<------MYB46(1)     <XXXXXXXXXXXXXXXXXXXXMIR414     <-----------HVH21      ----------->GT1    <---------------AtSPL3<---------YAB1--------->ARR11(3)   <---------ANAC46 -------YAB1 --------->CCA1(2)              --------->ICU4   <---------ARR11(3)   <---------ANAC55(2)   atgagagatggtgagatacaaacattgttggtactgtattttgaacatgatgatgatgaagatgatattgataagggatgtgtcacgtttattgagttct  11841100                                                                        --------->ANAC58               ------>MYB83                                             --------->ANAC58               ------>MYB46(1)                                        ---------->DOF2  <XXXXXXXXXXXXX               <---------CCA1(2)                                <---------ANAC58       --------------             --------->AtMYB61                                  <---------ANAC58 <---------GLK1(2)            --------->ANAC58                               --------->ARR11(3)    <---------ARR11(3)            --------->ANAC58                               <---------ARR11(3)    --------->ARR11(3)     <---------ICU4                  <---------AHL20(2)    <---------GLK1(2)   ----------->ARR10     --------->YAB1              <------ZmHOX2a(1)       ----------->ARR10 --------->CCA1(2)   cactgaaacatgacaccaaatctctcattttcttaggaaaaaattgtaacagaaaaaatgagattttcttgggaaagaaatgagattttcccaagatggg  11841200            <---------MYB46(3)                                               <-----------RAV1(1)          <---------ANAC58                                              <------ZmHOX2a(2)          <---------ANAC58                                         ---------->DOF2      <---------ANAC58                                          --------->YAB1      <---------ANAC58                             <---------ARR14(2)  <---------ARR11(3)       >>>>> XXXXXXMIR866-3P        ---------->DOF2     <----------DOF2   --------->GLK1(2)              >>>>>>>> --->AG   <---------ANAC46            <----------DOF2  <----------DOF2 --------->ARR11(3) >>>>>>>>>TBF1   ttttgtttgcttgcttgttgagacaacaaagtgtgtttctcttttactttgagaatactttgagaatcaaaaagatcaaatgttgttgagaagaagaaga  11841300                                        --------->CCA1(2)                               <------MYB83           <----------DOF2                <---------ARR14(2)     <---------ARR11(3)                --------->GLK1(2)      --------->ARR11(1)    <-----------GT1          --------->TOE2(3)       ----------->GT1         <------MYB46(1)   <---------ANAC58                   <-----------GT1 >>>>TBF1       --------->ARR14(2) ---------->DOF2<----------DOF2            <----------DOF2 >TBF1 <---------ZAT6         <---------TOE1(2)  <---------ANAC58      <---------GLK1(2)   agaatgagagagttaacaaatctgggtttttgtaggttaaagatttgagttgctttctttttatttcttctctgattctctttttttttcttaatgagag  11841400                                   --------->ZAT18               <------NtERF2                                   <---------ZAT18              --------->At4g35610                       <---------ARR11(3)                 ---------->DOF2                  <---------                       --------->ARR11(3)               ----------->HVH21                <---------YAB1                     <---------TOE1(3)               <---------AtMYB61                 <----------DOF2                     <---------TOE2(3)        *TSS--------->ALFIN1                   <---------At4g35610   agagggagagagagaaatggattaaggtctctgtgtgtgtgctaagaagagagtggaggtgaaaggagccgaatttaagtagttttgagctttcattgtc  11841500                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                         <---------AHL20(1)                                                                                         --------->AHL20(1)                                                                                         --------->AHL20(2)                                         <------------CBF                                <---------AHL20(2)                                       <---------AHL20(2)                             --------->YAB1                                       <---------YAB1                              --------->TOE2(3)                              <---------AHL20(2)                                   <----------DOF2                             <---------AHL20(2)                              <---------------AtSPL3 <---------ZAT18         <---------AHL20(2)                                  --------------->AtSPL8<- ---CBF       <---------TOE2(3)   <---------AHL20(2)                         <---------------AtSPL8<-   taggggacacaaatttgatgttgatattttttttatttttttttattgtatagttgtatgctaactaattttaaaagtttttgtactttaatattttatt  11841600       --------->AHL20(1)       <---------AHL20(1)       --------->AHL20(2)       <---------AHL20(2)    --------->YAB1  <---------YAB1 >AHL20(2)                        <---------ZAT6          <---------WOX13(1) -AHL20(2)                      <------MYB46(1)        <---------YAB1 -AHL20(1)                   >>>>>>>>>CBP60g       <---------DAG2           <---------YAB1      <---- --------YAB1  ---------->DOF2  <------MYB83       <----------DOF2<---------YAB1        ---------->DOF2 --------AHL20(2)            >>>>>>>>>SARD1  <---------ICU4   --------->TOE2(3) <-------TEIL    -----   ttttattaataaatttctaaagggaattgaaatttggtgttactcaaatatgactttttgattaacttaaaattgtttatgatacatttgtaaagtttct  11841700                                                                    <---------YAB1                                                                 <---------AHL20(1)                                                                 --------->AHL20(1)                                                            <------ZmHOX2a(1)                                                    <---------------AGL15                                       --------->YAB1     <---------TOE2(3)          <---------TOE2(3)           <---------YAB1--------------->AGL15          <---------TOE1(3)     ===================================HOX2a_HOX2a     --------->GLK1(2)  --------->AHL20(2)         <-----------------AGL1 -----HSFB2a(2)       --------->AHL20(2)           <-----------------AG              ----------->GT1 ---->HSFB2a(2)  <---------YAB1 <------ZmHOX2a(2)  <-----------------AGL2           <---------WOX13(1)   ataagagaatttaaggtttatgatttttatatagatcaaaatgataaacatatactaatttaggaaaaatattagtgtatatatagattgaaaaaatgtc  11841800                                         --------->ANAC58                                         --------->ANAC58                                       ---------->DOF2                                      <---------WRKY38(1)                                      <---------WRKY45                                      <---------WRKY12                                <---------ICU4                                -------->HAHB4                                --------->YAB1                                    --------->ICU4                               --------->ICU4                                     <---------YAB1                             --------->YAB1                                     <---------ICU4                            <---------AHL20(2)                                  --------->YAB1                           <---------AHL20(2)                                  --------->ICU4                           --------->AHL20(2)                                  <---------YAB1                           <---------AHL20(1)                             <---------ICU4                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          ----------->GT1                           --------->AHL20(1)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)            --------->YAB1                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)         <---------AHL20(2)                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)          --------->AHL20(2)                      xxxxxxxxxxxxxxxxxxx>smallRNA(se3)              --------->AHL20(1)                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)               <---------AHL20(1)                --------->GLK1(1)    --------->WRKY18(1)<---------YAB1<---------YAB1                <---------GLK1(1) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<---------AHL20(2)              <------ZmHOX2a(1)<---------YAB1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        --------->GLK1(2)         --------->CCA1(2)--------->YAB1 --------->ANAC46         --------->AHL20(2)  <---------ZAT6   tgaatttacagatagaggaattcttctaatataatgatggtcaaagcaactctcagttaatatagacataatataatcgttataattagtgagaatttgt  11841900  Previous    Next  AGI:  At2g27770.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G36470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16683.1); contains InterPro domain Protein of unknown function DUF868, plant (InterPro:IPR008586) Range:  from: 11839886    to: 11841446    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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