Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          <---------YAB1                                                                      <--------HAHB4                                                                      -------->ATHB1                                                                      <---------ICU4                                                                      -------->HAHB4                                                                      <---------AHL20(2)                                                                      --------->ATHB51                                                                      --------->YAB1                                                                     --------->ICU4                                                                     <---------YAB1                                              ----------->GT1        <---------ATHB51                                             --------->DAG2        --------->YAB1                                           ---------->DOF2        --------->AHL20(2)                                          <---------AHL20(2)      <---------AHL20(2)    --------->TOE2(3)                <---------AHL20(1)         <----------DOF2 --------->ARR14(2) --------->AHL20(2)                  --------->AHL20(2)         --------->TOE2(3) ---TEIL                             <---------ARR11(3)      --------->ARR11(3) <---------ARR14(2) -TOE2(3)      <---------AHL20(2)    --------->AHL20(1)      <---------ARR11(3)<---------CCA1(2) -YAB1         --------->AHL20(2)   ----------->TBP         <---------CCA1(2)--------->YAB1   <------   catttacataaatgattttaaatggaatgaaatctactatatattaaaaggtaaatttttgtaaatctttaattattattcatatccaatgccattaatg  11823400                                                                                                  <--                                                    --------->AHL20(2)                            <--                                                   --------->AHL20(2)                            ----                    <---------ARR11(3)    <------ZmHOX2a(1)                                      <---     <---------AHL20(2)                   ----------->GT1                         <---------STY1(2)    --------->AHL20(2)  <-----------GT1  <----------ID1                           --------->STY1(2) < --------->AHL20(2) <---------GLK1(2)    ----------->GT1                     --------->GLK1(2)   <--- ---TOE2(3)         --------->ARR11(3)---------->DOF2  ---------->DOF2   --------->ANAC46    --------   tttttatataatacattttaaagatttttctaacttacttaaaaggataaaaaataaaaaagattacacatatagacacaatctagctactgcaaaaaag  11823500                                           --------->AHL20(2)                                          --------->AHL20(2)                                          <---------AHL20(2)                                          --------->AHL20(1)                                          <---------AHL20(1)                                       <---------AHL20(2)                                      --------->AHL20(2)       ---------->DOF2             --------->AHL20(2) -------RVE1(1)                    --------->YAB1                 --------->YAB1 -------CCA1(1)                   --------->ICU4                 <---------ZAT6 ----->ARR11(3)                   <---------YAB1        <---------DAG2 ------GLK1(2)                  <---------ICU4          <---------------AGL15 ---------AHL20(2)    <---------DAG2  <---------AHL20(2)--------------->AGL15 ------ARR11(3)       <----------DOF2<---------YAB1     <----------DOF2      <---------AHL20(2) ----- -->DOF2   --------->YAB1   <-----------GT1<---------AHL20(2)<---------YAB1  --------->AHL20(2) -----   atttttttaaaaagcataaatctactttatttactaattataaatttaatttgtttcacttttattagtgataacaagattaattgttttgtttacacaa  11823600                                   --------->YAB1                                  <---------YAB1                                <---------ICU4           <---------YAB1      <---------YAB1                           <---------YAB1 ---->ANAC58                   --------->ICU4   ---------->DOF2         <---------AHL20(2) ---->ANAC58--------->ATHB12------->TEIL  ----------->GT1 ---------->DOF2               ----------->GT1   acaatattgttttatgatttcacttatatgaacattattatcaagagttataaagtttgcaaaagaaataggtttttattgactgaagaattgagaaatt  11823700                                                ------->GAMYB--------->ARR14(2)                                               --------->ANAC58                                               --------->ANAC58                                               --------->DEAR3(1)                  <---------TOE2(3)          <---------ATERF1(1)                  <---------YAB1            <---------WRKY12 <---------ARR14(2)                --------->AHL20(2)          <---------WRKY38(1)     --------->YAB1                <---------AHL20(2)        ------>NtERF2     --------->GLK1(1)               ---------               --------->AHL20(2)       --------->LBD16     <---------GLK1(1)     --------->LBD16        <----------DOF2              ------->TEIL     --------->AHL20(2)        <---------LBD16   ttctcatcacctttaaaattaatattgggcctagcgatgaaccgggccaacgcccattaaacatatccgataatagtttaaacccggagagactcaaagt  11823800                                                                         --------->TOE1(3)          -                                                                    xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                   --------->ANAC46                --                                                                --------->At4g35610               <--                                                                --------->ZAT18                  ----                                                                <---------ZAT14                  <---                                                                --------->ZAT14                  ----                                                            <---------SPL7                 ------>ZmHOX2a(1)                  <---------AHL20(2)             *TSS       ------>NtERF2--------->TOE2(3) ==========      --------->TOE2(3)             ------>ZmHOX2a(1)       <---------ATERF1(1)            ==========      --------->TOE1(3)            --------->TOE1(3)       --------->DEAR3(1)             --------->TOE2(2) ->DOF2   <------------CBF         --------->TOE2(3)    --------->DEAR3(1)                --------->TOE1(2)   agagaaaaccctaattgtatataaactaaaaatacttccttaattcttcacttcttcatcgccgtctgcacaaaaccctaatctcacaatctcctacgag  11823900              --------->At5g28300            --------->ANAC46            --------->ANAC58          <---------ALFIN1         <---------REM1(2)                                                                       ---- -------->WOX13(1)                                                                              ----- ---->ZmHOX2a(2)   --------->ANAC46                                                             <---- ----ZmHOX2a(2)    --------->ANAC58                                                             ----- ----->AGP1 --------->ANAC58                                               --------->ANAC55(2)  <---- ------ARR11(3)    --------->ANAC58                                      <---------AHL20(2)    <----- ----->ARR11(3) <---------WRKY38(1)                               <-----------GT1   <---------ZAT14 ====HOX2a_HOX2a<---------WRKY12                               <---------GLK1(2)    <---------ZAT18 =====HOX2a_HOX2a<---------DOF5.7(2)                       <------ZmHOX2a(2)        --------->ZAT14   atctatcagtctccacggtaaacgacactaatccatttcaatttctccatcgtcttctccgatcaaattctccatttacttatctgttcactatttttcc  11824000                                                         --------->MYB46(3)                                                        ------>MYB83                                                        -------->P                                                        ------>MYB46(1)           <-------GAMYB                               --------->MYB55(1)          --------->MYB111(2)                         --------->AtMYB61          --------->MYB55(2)                          --------->MYB46(3)          <-----------RAV1(1)                         --------->DEAR3(1)      <---------TOE2(3)                               <---------MYB111(2)      <---------TOE1(3)   <---------ANAC58            <---------MYB46(2)   <---------REM1(1)      <---------ANAC58            <---------MYB55(2) ----->LBD16     --------->LBD16                      <---------MYB111(1)                    -------- ---->HSFB2a(2)  ------>NtERF2                       --------->MYB46(3)           <---------TOE1(2) -----HSFC1(1)  --------->RAP2.6(2)         ---------->DOF2                   <---------YAB1<-------TEIL ---->HSFC1(1)  <---------ANAC46       <---------At4g35610         --------->GLK1(1)   <-----------RAV1(2) -----HSFB2a(2)<---------LBD16         --------->At4g35610       <---------RAP2.6(3)  <------ZmHOX2a(2) ----LBD16<---------MYB46(3)   <----------DOF2     --------->REM1(1)         <---------ARR14(2)   agaagatgaaggttgttgccgcatacttgctcgctgttttgagcggaaaagcttcaccaaccagtgccgatatcaagactatccttggatcaggttcgtt  11824100                                        <---------MYB52(1)                                     <-------TEIL                          <---------YAB1                                    --------->ARR14(1)                    <----------DOF2      --------->ANAC58             <---------GLK1(2)                   <---------ARR11(3)      --------->ANAC58           ----------->ARR10                     --------->ARR11(3)        <---    ------->TEIL             --------->ATHB12              <---------ARR14(2)                    <--- ->MYB52(2)<---------ATHB12 <---------YAB1                 --------->ARR14(2)              --------->ARR11(3)   ttgatgaatcgcaatcgatttcattacaatatgattagattcgttgtttgagtcgctggagaattcgatttgaaatctttattagatagttgagaacttg  11824200                                                                                    ----------->GT1                                                                                    <---------ZAT6                                                                           <---------ANAC46                                                                           <---------ANAC58                                 <---------TOE2(3)                         <---------ANAC58  --------->At4g35610            <---------YAB1                            <---------ANAC55(2)   ----  <---------At4g35610            <---------TOE1(3)                        <-------TEIL          <---- ------ANAC58          <---------TOE2(3)------>ZmHOX2a(1)     --------->YAB1    --------->ICU4  ----- ------ANAC58    ------->TEIL <---------YAB1                 <---------YAB1--------->ANAC55(2)  <----   cttaagctgaaatgatatgtatattagggatttttatggttcctatcgacttaaacggtgtttatgatagtcgagatgcgtaagtattgttaagagtaat  11824300  Previous    Next  AGI:  At2g27710.1    Description:  60S acidic ribosomal protein P2 (RPP2B). Identical to 60S acidic ribosomal protein P2-2 (RPP2B) [Arabidopsis Thaliana] (GB:Q9SLF7;GB:Q8LB03); similar to 60S acidic ribosomal protein P2 (RPP2A) [Arabidopsis thaliana] (TAIR:AT2G27720.1); similar to 60s acidic ribosomal protein-like protein [Solanum tuberosum] (GB:ABA40434.1); contains InterPro domain Ribosomal protein 60S; (InterPro:IPR001813) Range:  from: 11823849    to: 11824944    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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