AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved TF binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
----------->HVH21 <-------PIF5 <-------MYC3 <-------MYC2 ------->MYC2 ------->MYC3 ------->PIF5 --------->ANAC58 --------->ANAC55(2) --------->TGA1a --------->bZIP60(2) <---------TGA1a --------->O2 <---------ANAC55(2) <---------MYB52(1) <---------O2 <-----------------AGL2 --------->ANAC58 <-----------------AGL1 --------->ANAC46 --------->ATHB12 ----------------->AGL1 ---------ALFIN1 <---------ICU4 <---------AtLEC2 - ------------>DYT1 <---------YAB1 <---------ALFIN1 <-----------------AG ------- -------------->PIF3(1) --------->YAB1 <---------AHL20(2)--------->ZAT14 <------- ---HVH21 ----------->GT1 <---------YAB1 --------->AHL20(2) <---------ZAT14 --------->YAB1
agccacgtgacaacgcttggaaaaaaacaattttgatcattggggaattttatcgaacaccttctgtgcattgcccgtttgggatttttcaagaataaat	11799300
--------->AHL20(2) ----------->GT1 --------->ATHB12 ------->GAMYB <---------YAB1 ----------->RAV1(1) --------->ICU4 -------->MYB46(3) <---------LBD16 -->WOX13(1) --------->ATHB12 --AHL20(2) <---------ANAC46 <---------MYB59 <---------YAB1 <---------AHL20(2)
caacaacagagaattcaacatttgtgtgaataatcgaattttgggtaagacctaaatgtagaatggtcttcatgtttggggatgattaaaatttcgagtt	11799400
--------->ARR14(2) <---------ARR14(2) ------->TEIL ------->PIF5 <-------MYC2 ------->MYC2 ------->MYC3 <-------PIF5 ------->MYC4 ------->PIF4 <-------MYC3 <-------PIF4 <-------MYC4 --------->O2 <---------TGA1a <---------O2 ========================== --------->ANAC55(2) <---------ANAC55(2) --------->TGA1a <--------- ------------>OsbHLH66 <------------OsbHLH66 <---------AHL20(2) --------->CCA1(2) <---------WOX13(1) ==========
tggaatttttttgcagtaagaggcgatacaagagaagaagagactcgacgaatcaagtagcaagagagaagattgacacgtgcctattctctcctttctg	11799500
--------->ALFIN1 =========================================bZIP_DOF <---------ANAC58 <-------TEIL <---------ANAC46 <------NtERF2 <---------ANAC55(2) ------>NtERF2 <---------ANAC55(1) <---------MYB46(3) <---------O2 <---------ANAC46 --------->O2 <---------LBD16 --------->TGA1a ------>ZmHOX2a(2) <---------ATERF1(1) --------->ANAC55(2) ===================================HOX2a_HOX2a <---------ANAC58 <---------DEAR3(1) --------->ALFIN1 <---------TGA1a <------ZmHOX2a(2) <---------ANAC58 <-----------------------TaNAC69(2) ====================================HOX2a_HOX2a =bZIP_DOF <---------ARR14(2) <------ZmHOX2a(1) -DOF2 ----------->GT1 <---------GLK1(1)<---------YAB1 <------ZmHOX2a(1) <---- ============bZIP_DOF ---------->DOF2 --------->ARR14(2) <-----------GT1 <---------ANAC58
aagttacgtgtggaaaaatgagtcttgagatagcttcaagcgctacaagagatcggcgggttcattcttatttacctagaggaggaccagcgtggctcct	11799600
*TSS <---------ZAT14 --------->ZAT14 --------->ZAT18 <---------YAB1 <------MYB46(1) --------->ICU4 <------MYB83 <---------TOE2(3) <---------AtMYB61 --------->YAB1 <--------P <---------ICU4 <-----------RAV1(1) --------->ICU4 --------->ALFIN1 --------->ANAC58 --------->YAB1 <---------ZAT6 <--- --------->ANAC58 --------->ARR11(3) <-----------GT1 <---------ANAC58 <---- --------->ANAC46 <---------ARR11(3) <---------WOX13(1) <---------ANAC58 ------ ------DOF2 --------->YAB1 <---------YAB1 <---------ANAC46 <-----
ttcacgaattgaagaagagaagcgaagataataatgtttagttatgtttgatttacatccttgttttgttttggagtgttggtgctctgtttttgggctg	11799700
<----- --------->ATHB12 ------ <---------ICU4 ------->TEIL --------->YAB1 --------->ANAC58 <--------HAHB4 --------->ANAC55(1) <---------YAB1 <---------ANAC55(2) <---------ICU4 --------->ANAC58 <---------YAB1 --------->ANAC55(2) --------->ICU4 --------->YAB1 <---------TOE1(2) --------->YAB1 <---------ANAC46 <---------TOE2(2) <------------CBF <---------YAB1 <---------ANAC58 ------->TEIL <---------YAB1 --------->ARR11(3) <---------ANAC58 --------->ANAC58 ------MYB52(1) <---------ARR11(3)<---------ANAC58 --------->ANAC58 ---GAMYB <---------YAB1 <---------ANAC58 --------->ANAC46 ----->GT1 ------------>CBF <---------GLK1(1) ------>ZmHOX2a(1) ----MYB46(3) <-----------GT1 --------->TOE2(3) <---------ICU4 ----------------------->TaNAC69(2)
ttatttctattgtagagactcagtttttatcaatatcattatcattagatttcttacttgtgactcatgactcatacttggtctcctacgcacgtattta	11799800
----------->RAV1(1) ------->TEIL --------->ANAC46 <---------At4g35610 --------->ANAC58 ------->GAMYB <---------ZAT2 --------->ANAC46 --------->DREB2C(2) <---------ZAT18 --------->ANAC58 --------->MYB46(3) <---------MYB46(3) <---------MYB52(2) --------->DEAR3(2) <-----------RAV1(1) --------->ANAC58 --------->MYB52(1) <---------ZAT14 ----AHL20(2)<---------ANAC58 --------->ANAC46 --------->YAB1 --------->At4g35610 ------- --->AHL20(2)<---------ANAC58 --------->ANAC58 <-------TEIL --------->WOX13(1) --------->ATHB12
aatgtgttgttgtgagcttgtgatcagtagcaagccacgaaccagtagcattcataaccgacataaatcaactggacagagtttagtaaatgatagagat	11799900
<------MYB46(1) --------- <------MYB83 <-------- --------->MYB59 <---------YAB1 <---------ARR11(3) --------->AHL20(2) --------->WOX13(1) <---------MYB46(3) --------->MYB46(3) <---------AHL20(2) --------->TOE2(3) <---------MYB52(1) --------->MYB52(1) --------->YAB1 ----------->GT1 <---------TOE2(3) ----------->RAV1(1) --------->HSFB2a(2) -->CCA1(2) --------->YAB1 <-----------GT1 <----------ID1 --------->At4g35610 <---------ATHB12
gagccaaatgttaatcaaaactatcttataacgtttggtcatataagagccaaaatcaacagatgagttttgtacatccagacaaatcatataattaaaa	11800000
--------->ATHB12 --------->ANAC58 <----------DOF2 <---------YAB1 --------->ANAC58 >AHL20(2) --------------------->WRI1 >>>>>>>GRF7 ------>ZmHOX2a(2) -AHL20(2) ---------->ID1 --------->ATHB12 <-----------HVH21 ---------
aaaaacttcttttgaactgaaacatgtcgctattgtatacatcgatgatgggttttcattctgaaacacttgtcaggccattgatcggacaacttcgtaa	11800100
<---- -------->ATHB1 <---------ALFIN1 <--------HAHB4 <---------HSFB2a(1) ------->GAMYB <---------ALFIN1 ------ --------->HSFB2a(1) --------->MYB46(3) <---------bZIP60(1) --------- ------->TEIL --------->GLK1(2) --------->bZIP60(1) --------->ICU4 <---------ARR14(2) <-----------ARR10 ------>ZmHOX2a(1) <---------ATHB12 --------->GLK1(2) <---------GLK1(2) <---------ARR11(3) --------->WOX13(1) <---------GLK1(2) <----------DOF2 <-----------GT1 ------>MYB46(1) <---------ALFIN1 <------ -->GT1 <------NtERF2 --------->ANAC46 ------>MYB83 --------->ANAC46 <--------
aacagaatctctggccgaacctttctttctccacagaatctaaccacactcttccagttaccaacatcctatggcatcaccacacatatatcaatcatta	11800200

AGI:	At2g27630.1
Description:	ubiquitin carboxyl-terminal hydrolase-related. similar to ubiquitin carboxyl-terminal hydrolase-related [Arabidopsis thaliana] (TAIR:AT2G27650.1); similar to ubiquitin carboxyl-terminal hydrolase-related [Arabidopsis thaliana] (TAIR:AT5G51530.1); similar to ubiquitin carboxyl-terminal hydrolase-related [Arabidopsis thaliana] (TAIR:AT5G61940.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62486.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087); contains InterPro domain Protein of unknown function DUF627 (InterPro:IPR006866); contains InterPro domain Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2;
Range:	from: 11794475	to: 11799681	Orientation: Reverse
Links:	TAIR MIPS

AGI:	At2g27650.1
Description:	ubiquitin carboxyl-terminal hydrolase-related. similar to ubiquitin carboxyl-terminal hydrolase-related [Arabidopsis thaliana] (TAIR:AT5G51530.1); similar to ubiquitin carboxyl-terminal hydrolase-related [Arabidopsis thaliana] (TAIR:AT1G52450.1); similar to ubiquitin carboxyl-terminal hydrolase-related [Arabidopsis thaliana] (TAIR:AT2G27630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62486.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087); contains InterPro domain Protein of unknown function DUF627 (InterPro:IPR006866); contains InterPro domain Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2;
Range:	from: 11799902	to: 11804789	Orientation: Reverse
Links:	TAIR MIPS

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