Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->YAB1                --------->ANAC58                --------->ANAC58    ----------->RAV1(1)               --------->DAG2      <----------ID1              ---------->DOF2  --------->ANAC58           <----------DOF2        ------->GAMYB<---------ATHB12 --------->MYB46(3) <---------ANAC58       --------->MYB46(3)      --------->ANAC58          <---------ANAC58               --------->ANAC58     ----------->RAV1(1)---------->DOF2       ---------->DOF2                           --------->ANAC58 --DOF2<---------MYB52(2) <----------ID1   --------->TOE2(3)  <---------YAB1 ----------->GT1        -   gtgactgcaacaaacaaaaagcaatgaaaagacaagaacaacaaatgttaaagcttagtgcttgatgatagaacaagaacagtgaaacacaaacaataca  11786500                                                                       <-----------GT1        --------->TOE2(3)                                          <----------DOF2                  -      <---------ARR11(3)         <-------TEIL                <---------------AtSPL8                 -      --------->ARR11(3)        --------->CCA1(2)            --------------->AtSPL8                 - ---------->GT1    <----------DOF2    --------->ZAT14        --------------->AtSPL3              ----   atttgttaaatcttagtgcttctttatacaagagatacagagaactctctccctaagaaaatttaagtacttttaactgatttcataaaaccagtaagaa  11786600                                                       <------MYB46(1)                                                   <---------MYB46(3)                                            --------->MYB52(1)                                          ----------->HVH21                            --------->ATHB12        ------->TEIL                     --------->TOE1(3)                            <---------YAB1      --------->YAB1                     --------->TOE2(3)                      --------->GLK1(2)     <---------ATHB12                   <---------ANAC46  ---------->DOF2       --------->ARR14(2) <---------ATHB12            <---------GLK1(2)   <---------GLK1(2)              <---------ARR14(2) -------->ANAC46      --------->ANAC58  ----------->RAV1(2)                    <---------GLK1(1)    < -------->ANAC58      --------->ANAC58  --------->At4g35610   <---------------------WRI1            < -------->ANAC58      --------->AtLEC2  <---------ANAC55(2)--------->DAG2      --------->GLK1(1)   <- ----->MYB46(3)  <----------ID1      <---------MYB52(1)<------MYB83  <----------DOF2  <---------ATHB12   ccactcaatgaaacttagaaggccaagcacagaattgcagttacctgaacggattgttggtaaaggagaaactttgaaggcaaatccgatgattcgtttc  11786700                                                                     <-------GAMYB                                                                  <-------GAMYB                                                                 --------->MYB55(2)                                                                 ------>NtERF2                                                                 <---------MYB46(3)                                                                <---------ANAC46                                                               <------NtERF2                                                               <---------LBD16                                                              <---------DEAR4(2)                                                              <---------ATERF1(1)                                                             <---------RAP2.3(3)                                                             --------->ATERF1(2)                                                             <---------ATERF1(2)                                                             <---------DEAR3(1)                                                            --------->ATERF1(1)                                                           --------->At4g35610                                                           --------->ZAT2                                                          ------->GAMYB                                                         <---------MYB55(2)                                                         --------->MYB46(3)                                                        --------->At4g35610                                                        <---------At4g35610                                                       ----------->RAV1(1)                                                     <------NtERF2<------NtERF2                                                    --------->ANAC58--------->ALFIN1         --------                                                    --------->ANAC58<---------MYB46(3)   <---------At4g35610           <<<<<<<<<TBF1                       <---------LBD16<---------RAP2.3(1)        --------->At4g35610        <<<<<<<<<TBF1                        <---------DEAR3(1)<---------MYB52(1) --------->ARR11(3)< --------HAHB4     <-----------HVH21         --------->ETT(2)--------->DEAR3(1)  <---------GLK1(1)  - ---------ICU4<<<<<<<<<TBF1                  ----------->HVH21------>NtERF2------>ZmHOX2a(2)<-------- --------ATHB12    <-----------TGA1          --------->DEAR3(1)--------->ATERF1(1)<---------ARR11(3)<   catcattttcttcttcttcttcgtcagagttttcttcatcttcttcgtcgacggaggcaacagccggcgggtgttgatcgtagaaatcttcagcatcatt  11786800                            <------MYB46(1)                            <------MYB83                   <---------ANAC46                   <---------bZIP60(1)                   --------->TGA1a                   <---------bZIP60(2)                   --------->O2                 <---------ATERF1(1)                ----------->HVH21           <-----------RAV1(1)     <-----------GT1       --------->MYB59  --------->KAN4(2)<---------TGA1a <---------KAN4(1) <---------O2 --------->KAN4(1) --------->DEAR3(1) ->ATHB12<----------DOF2   <---------TOE2(3)                                                      <-- ---------KAN4(2)------>NtERF2                                                     --------->LBD16--- -------->ARR14(2)<------NtERF2   <-----------GT1        <------NtERF2  <---------GLK1(2)    <------- -YAB1   ====================bZIP_DOF                 ---------->ID1    --------->ARR14(2)   -------- ---------ARR14(2)--------->ATERF1(1)      --------->ARR14(2)           <---------ARR14(2)   <-------   cgaatattcacctttgtggcgacgtcgattaggttttttctctcgtttccccatttgtcgtcgttctcagtccaaattctcaatccagagaatagagcag  11786900                                                                                 --------->ANAC58                                                      XXXXXXXXXXXXXXXXXXXX>MIR319A/B   --------->ZAT14                                    XXXXXXXXXXXXXXXXXXXX>MIR159A   <---------ZAT14           --------->WRKY45         XXXXXXXXXXXXXXXXXXXX>MIR319C         <---------   <---------ZAT18           --------->WRKY38(1)     XXXXXXXXXXXXXXXXXXXX>MIR159B<---------O2 -------ZAT14               --------->DOF5.7(2)      XXXXXXXXXXXXXXXXXXXX>MIR159C<---------TGA1a ------>ZAT14               *TSS <----------DOF2  =========================================bZIP_DOF --At4g35610           --------->DAG2     <---------ANAC46       <---------ZAT18 --------->O2 ->ZAT14              ---------->DOF2   <---------ZAT14   <---------ZAT14        --------->TGA1a --ZAT14    <------ZmHOX2a(1)--------->WRKY12     <----------DOF2--------->ZAT18 --------->ANAC58   agcagagcagtcgaggaagaagagaaaagcgttgactttgtgtttagtgtgtctttagactgaagagtgccctaaactatgccacgtaggccctattgct  11787000                                                      --------->YAB1                                                <------MYB83     <---------ANAC46          <XXXXXXXXXXXXXXXXXXXXMIR841B  --------->ALFIN1   --------->ZAT14            <---------MYB52(1)----------->GT1 <---------ANAC46          <---------TOE2(3)   <---------ZAT14 <-----------HVH21   <---------MYB46(3)--------->YAB1<xxxxxxxxxxxxxxxxxxxsmallRNA(si3) ---CBF<---------ZAT6     --------->MYB52(1)    <------MYB46(1) ----------->GT1      <-----------GT1   ctcggtttagtgttttttttgggtcaaataccggtttttagtggttcggatggtatttatcatgtggggttttttttttttttttttttactatggttta  11787100                                                                                                  ===                                                                                                  ---                                                                                                 ====                                                                                                 <---                                                                                                -----                                                                                                <----                                                                                                <----                   --------->TOE2(3)            --------->At4g35610                             -----                   --------------->AGL15        <---------At4g35610                             -----                  <---------ANAC55(2)    <---------ANAC46                               --------->TOE2(3)             --------->YAB1              <---------ANAC58       ----------->GT1       --------->ARR11(3)             <---------ICU4              <---------ANAC58       --------->ANAC55(2)   <---------ARR11(3)            --------->ICU4       <---------AtMYB61        --------->ANAC58            --------->GLK1(2)      ----------->GT1       <---------ZAT6<-------GAMYB   --------->ANAC58     <----------DOF2  <----   gaaaaacttggttaattatcacctaaaatagtgttttggtgtttcgttggagatgactagacgcataggtaacaaatagtactttgaaaatctcaataga  11787200         ------>ZmHOX2a(2)        <---------GLK1(1)        --------->GLK1(1)       --------->ARR11(3)       <---------ARR11(3)      --------->YAB1     <---------ATHB12     --------->ICU4 ===================HOX2a_HOX2a                           --------->CCA1(2) --->ZmHOX2a(2)                                          <---------ARR14(2) ===================HOX2a_HOX2a                          --------->ARR11(1) ---ZmHOX2a(2)                                           --------->ARR14(2) ---->AGP1                                               --------->ARR11(3) -----ARR11(3)                                    <---------ANAC58            <---------YAB1 -----AGP1   ------>ZmHOX2a(1)                <---------ANAC58              --------->YAB1 ---->ARR11(3)               <---------YAB1   <---------ANAC58     <---------ANAC58    <---------ARR11(3) ---->ARR14(2)     --------->YAB1         ------->TEIL   <---------ARR11(3)<---------ATHB12  <------- -----ARR14(2)    <---------YAB1<---------WOX13(1)<---------ANAC58 <---------ANAC58    --------->ARR11(3)   tcttgcaatgatctcctcttattataagtttatgatggataatgtatttcttacttgaagatatgtgtttcttgccaataactattgattatcttgtgtt  11787300               <---------YAB1             <-----------GT1         <---------ARR11(3)         --------->ARR11(3)         --------->AHL20(1)                             <---------GLK1(2)         --------->AHL20(2)                         ------->TEIL         <---------AHL20(2)                --------->ZAT6                             <----------DOF2      --------->YAB1                       --------->ANAC46                    <----------DOF2      --------->AHL20(2)                 <---------ALFIN1                  <-----------GT1 --ANAC46<---------AHL20(1)   <---------MYB59    <---------ATHB12   ----------->GT1   --------->TOE2(3)   taagacaataatatattaccatttttgtattgcctaatcgcttccacactaatgaacatattctttgaacttgaaaatttccttttttctttaatgcatt  11787400  Previous    Next  AGI:  At2g27590.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO48766.1); contains domain SSF53335 (SSF53335) Range:  from: 11784631    to: 11786928    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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