Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     --------->HSFB2a(2)   <---------HSFB2a(2)  ------>ZmHOX2a(2)                     <---------ANAC58 <------ZmHOX2a(2)                --------->At4g35610--------->RAP2.6(2) ---------ARR11(3)                <---------At4g35610----------->RAV1(1) -------->ARR14(2)          <---------ANAC46      --------->ANAC58 ---------ARR14(2)       --------->GLK1(2)        --------->ANAC58               <---------HSFB2a(2)- -------->ARR14(3)      <---------ARR11(3)        --------->ANAC46            <---------ARR14(2)    - ---------ARR14(3)      --------->ARR11(3)      ---------->DOF2             <---------MYB46(3)     -- ---------AGP1          <---------GLK1(2)    --------->LBD16             --------->YAB1            -- -------->ARR11(3)     <---------RVE1(1)<---------ANAC58        <---------At4g35610                --   aagatctcgaaaacatttggaacagagattttgtgtagctgtgcttccgaagaagccacaattgttagcacataatcgtggttcttgaagtctgtgttct  11784200                                                                                             <-------                                                                                         <---------ANAC58                                                                                         <---------ANAC46                                                                                         <---------ANAC58                                                                                      <---------MYB52(1)                                                                                    <-----------RAV1(1)                                        --------->GLK1(2)                          ------>ZmHOX2a(2)                                        --------->ARR11(3)                       <---------ARR14(2)     --------->MYB52(1)                 <---------ARR11(3)                       <---------ARR11(3) -------->LBD16               --------->LBD16                                    --------->ARR11(3) ----->NtERF2                 ------>NtERF2                                      --------->ARR14(2) ------->ANAC58              <---------DEAR3(1)     --------->MYB52(1)           <---------AGP1 ------->ANAC58             <---------LBD16         <-----------GT1 --------->YAB1<------ZmHOX2a(2) ------->ANAC46 <------ZmHOX2a(2)      --------->RVE1(1)  <------ZmHOX2a(2)      --------->AGP1   tccgccataacagaatggatcaaaacaaactccggcgaaaaaaatctacaaaattaaccgatcgatggaatcaaaaatcaatagatctgttgcttaaatc  11784300                                                                                     ------>ZmHOX2a(2)                                                                                    <------ZmHOX2a(2)                                                                                   <---------ARR14(2)                                                  --------->ANAC46                 --------->ARR11(3)                                                  --------->ANAC58                 --------->ARR14(2)                                             <----------ID1                        --------->AGP1                                    <---------DEAR3(1)                             <---------AGP1                                    ------>ZmHOX2a(2)        ----------->GT1       <---------ARR11(3)                             --------->MYB52(1)   --------->ANAC58          --------->AHL20(2)    ---                   ----------->GT1--------->ARR14(2)      ----------->RAV1(2)--------->ATHB12<------- --CCA1(2)       ---------->DOF2  <---------ARR14(2) <---------ICU4   --------->MYB52(1)     --------   tcatcaaaactatagaacagaaagaaaaaactaatggatcggcgaaaacaacaagtcattacctggtgaaaaaaacgatttattagatctgttcgaatcg  11784400                                 --------->YAB1                             <---------YAB1                            --------->AHL20(2)                   --------->GLK1(2)  <---------MYB46(3)        <---------AHL20(2)                                                   ---- -------->HVH21    --------->ARR14(2)         <---------ATHB12      ---------->DOF2         --------- --ARR14(2)        <---------ARR14(2)       --------->GLK1(1)   ---------->DOF2        ---------->DOF2 ->ARR14(2)       <---------GLK1(2)    ----------->GT1      ---------->DOF2      --------->CCA1(2)   gtgatggttctaagaagagagaatctgtatttttataagaagagagaaatcaatggaatatggaaagaaagaaaggaatcgagagatgagaaaggaaaga  11784500                                        <---------ATHB12                  ----------->GT1  --------->ANAC46              <-----------GT1              --------->ARR14(2)   --------->ANAC58        <---------YAB1             <------ZmHOX2a(1)     --------->ANAC58      ----------->GT1         <---------YAB1          ------>NtERF2       --------->AHL20(2)                --------->SPL7       <---------ICU4           --------->DEAR3(1)   --------->AHL20(1)               <---------MYB52(1)      --------->ICU4       --------->MYB52(1)        <---------AHL20(2)              <---------RAP2.6(3) ----->CCA1(2)<---------ARR14(2)<---------DEAR3(1)  --------->AHL20(2)       <-----------RAV1(1) ->DOF2--------->YAB1    <---------MYB52(2)         <---------AHL20(2)<----------DOF2<---------SPL7   gatgaagaattatgaggaaatgggaaaactaacgacgacgcaatcgatacaaaattaaattgttattttactcttttttttgttggccgtaagatggaaa  11784600                                                                 --------->REM1(1)                                                                 --------->ZAT6                                                                ------>MYB83                                                                -------->P                                                                ------>MYB46(1)                                                              <---------MYB111(1)                                                              --------->AtMYB61                                                     --------->HSFB2a(2)                         <---                                         <---------ANAC58   ------->TEIL                   <---------WOX13(1)                              <----------DOF2        <---------HSFC1(1)                   <---------ANAC58                             <---------ANAC58        <---------HSFB2a(2)                  <---------ANAC58                   ----------->GT1       <---------ANAC58--------->ANAC58      ------------>CBF <----        <---------LBD16      <---------ANAC58     --------->GLK1(2)           <-----------GT1   -----      *TSS         <---------ZAT6        <---------ANAC46--------->ANAC58   --------->AHL20(2) <-----   ttggacaatttgtggaaaatggtgttatttggcttttgggctagcgttgaagattccagaagcacctacactattcattttaacaattttgtgcttgata  11784700                                                                                              ------>ZmHOX2a(2)                         <---------YAB1                                                      --------                         --------->AHL20(1)                                                  <------ZmHOX2a(2)                         <---------AHL20(2)                                                 <--------       <---------YAB1   --------->YAB1                                                      ---------     --------->YAB1     --------->AHL20(2)                                                  ---------     <---------ICU4   --------->AHL20(1)                        --------->AHL20(2)          <--------    --------->ICU4    --------->AHL20(2)------->TEIL            <---------AHL20(2)          ---------    <---------ATHB12 --------->YAB1--------->YAB1       <-----------HVH21                   <-------- ---------CBF      --------->AHL20(2)<---------YAB1  <---------ANAC58                       <-------- -----ICU4  --------->ANAC58       <---------ICU4    <---------ANAC55(2)               ---------->DOF2 ---->ATHB12<----------ID1        --------->ICU4     <---------ANAC46              <----------ID1 ----YAB1   --------->ANAC58      <---------ATHB12   <---------ANAC58      ----------->GT1 <------ZmHOX2a(1)   attgaaatcatgagacgacaaaaaaataatattgaaatcatgaaactaaaccagtgcgtgtcagaaataaatactagatgtaaaatcgacaaaggatctg  11784800                                                                 --------->ANAC58 ---------->DOF2                                        ----------->RAV1(1) ->At4g35610                                         --------->RAP2.6(2) -ARR11(3)                                           --------->ANAC46 >ARR11(3)                                           --------->ANAC58 >ARR14(2)                          --------->YAB1<---------WRKY18(1)                               < -ARR14(2)                   --------->CCA1(2)   --------->WRKY12--------->ANAC58                   < >GLK1(2)               ---------->DOF2          ----------->HVH21                           -------- -AGP1               XXXXXXXXXXXXXXXXXXXX>MIR157A-C  --------->ANAC58       --------->YAB1   <------- ---ARR10      <----------DOF2  ---------->DOF2--------->At4g35610 <---------ICU4        ---------->DOF2   agttaaagggctagtgtcttttgatcaaaagatagaaagcataactagaggctgaccgcaacaatgtaagcattccaagaatcacactgttgaaagctct  11784900                                                                  <---------MYB52(1)                                                             <---------SPL7                                ------>MYB46(1)              <-----------HVH21                              <---------MYB46(2)            <---------ANAC58                              <---------MYB111(1)           <---------ANAC58                              --------->MYB46(3)           --------->HSFB2a(1)                              --------->AtMYB61            <---------HSFC1(2)                              <---------MYB52(2)           <---------HSFB2a(1)     --------------->AtSPL8   <---------MYB111(2)          --------->HSFC1(2)     --------------->AtSPL3   <---------MYB55(2)        <---------At4g35610                   <------ ---------ANAC58             --------->ANAC58         <---------HSFB2a(2)                     ------- ---------ANAC58             --------->ANAC58  --------->ANAC58  --------->LBD16   --------->ARR14(2) ->ARR11(3)    <---------GLK1(1)------>MYB83   --------->ANAC46<---------LBD16     <---------ARR14(2) --ARR11(3)    --------->bZIP60(1)             --------->ANAC58--------->SPL7  ----------------->AGL2   tgacttgttcgtacttgatatcacgtccagcaccaaacccatctgttctacgcatttcagaagcgtccggcatttctctgagccagaaatggactgagct  11785000                                                                          <-----------GT1                                                                      <------ZmHOX2a(1)                                                                    --------->LBD16                                                                   <---------HSFB2a(2)                                                                   <-----------RAV1(2)                                                                   <---------LBD16                                                                   --------->HSFB2a(2)                                                                 ==========================HOX2a_HOX2a                                    <---------ATHB12             <------ZmHOX2a(2)           <-------                               --------->LBD16                   --------->CCA1(2)           --------                               ------>NtERF2                    --------->ARR14(2)           --------          ------>ZmHOX2a(1)   <---------ETT(1)                  --------->ARR11(3)          <--------    --------->At4g35610       --------->ANAC46<---------ALFIN1  --------->AGP1              ---------    <---------At4g35610      <---------LBD16 ------>MYB46(1)    <---------ARR14(2)          <--------    --------->ZAT2      <---------CCA1(2)    ------>MYB83      --------->At4g35610   <---------ARR11(3)    <---------ZAT2    <----------DOF2--------->YAB1         --------->At4g35610     <------ZmHOX2a(1) ---At4g35610         ------>ZmHOX2a(1)    <---------MYB111(1) --------->GLK1(1)  <---------TOE1(2) -->At4g35610        --------->TOE2(3)     --------->AtMYB61<---------At4g35610  <---------LBD16   aaacccagcttcctccatacaatcctttatctccggcaatgaccacctacacatatatgaacagcagatccaggagttacttctcaggaacttaatgatt  11785100  Previous    Next  AGI:  At2g27580.1    Description:  zinc finger (AN1-like) family protein. Identical to Zinc finger A20 and AN1 domain-containing stress-associated protein 3 (SAP3) [Arabidopsis Thaliana] (GB:Q9ZNU9); similar to zinc finger (AN1-like) family protein [Arabidopsis thaliana] (TAIR:AT3G52800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15931.1); contains InterPro domain Zinc finger, A20-type; (InterPro:IPR002653); contains InterPro domain Zinc finger, AN1-type; (InterPro:IPR000058) Range:  from: 11783488    to: 11784606    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g27590.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO48766.1); contains domain SSF53335 (SSF53335) Range:  from: 11784631    to: 11786928    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version