Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                                  ---                                                                                              -------                                          --------->TOE2(3)                            --------->TOE2(3)                                          --------->YAB1                             --------->ARR11(3)                                         <<<<<<<<<ARR1                               <---------ARR11(3)    >>>>>>>>>>>>>>>>>LFY                 <<<<<<<<<ARR2                              <---------RVE1(1)    <<<<<<<<<<<<<<<<<LFY                <-----------ARR10                           --------->CCA1(1)  --------->YAB1                   --------->ANAC46                                 --------->GLK1(1) --------->ICU4               <---------------AtSPL3                                <---------GLK1(1) <---------ATHB12             --------------->AtSPL8                                --------->RVE1(1) -AGP1              <---------YAB1--------->SPL7                                    <---------CCA1(1) >AGP1--------->ATHB12  <-------TEIL    --------->GLK1(2)         <<<<<<<ZML2      --------->ARR11(3) -ARR11(3)       --------->AHL20(1)--------->ANAC58     --------->YAB1             <---------ARR11(3) >ARR11(3)       <---------ARR11(3)--------->ANAC58 <------ZmHOX2a(1)   --------->YAB1 --------->YAB1   gcaataatccattggacaatatatgatacatctatgtacgacaatcttagcataggaatcaaaaactagaacaatagcaataagagatatcttaatgaaa  11772800                                                                                          <----------                                                                                          -----------           --------->TOE2(3)                                                        --------->At4g35610     <---------------AtSPL3                                                         <---------At4g35610     --------------->AtSPL8         <---------MYB52(1)                     --------->ZAT6<---------YAB1 <----------DOF2                ------>ZmHOX2a(1)               <---------HSFB2a(2)<---------TOE2(3) -------ARR11(3)           ------>ZmHOX2a(1)                    --------->HSFB2a(2)<---------TOE1(3) ------>ARR11(3)       --------->ARR14(2)                   <---------ANAC58      <-----------GT1 --->DOF2------->TEIL  <---------ARR14(2)  ----------->GT1  <---------ANAC58 <---------YAB1   gacctttcaagtacctcattttgagtttcctctcctccgatgggcgagtgatatttgcaatggcttctctaagagtatcactattaagcttactataaaa  11772900                                                            ------>ZmHOX2a(2)                                                           <------ZmHOX2a(2)                                                          >>>>>>>>>GATA-4                                                          >>>>>>>>>GATA-2                                                          >>>>>>>>>GATA-1                                                          <---------ARR11(3)         <---------CCA1(2)                                >>>>>>>>>GATA-3 --------->MYB46(3)       <-------TEIL  --------->ZAT6    --------->ARR11(3)                        < -----AGL15              --------->CCA1(2)                --------->AGP1              <---------TOE2(3) ---->AGL15           --------->MYB59 --------->YAB1     --------->GLK1(1)          ---------->DOF2 -   cgaacaaacccatttctcaattgttagatacattgagcaataagactatatcaatagagagatctatatgaaaattggtagaagagtaaaggaagaattt  11773000                                                     --------->YAB1               <---------GLK1(2)         ---------->DOF2             <---------YAB1            --------->ANAC46     --------->ANAC58    --------->ALFIN1    ------->TEIL                       --------->ANAC58     --------->ANAC58  <---------ANAC46 ---------------AtSPL3                 --------->ANAC58  <----------ID1    --------->ICU4    ------->TEIL -------------->AtSPL8   <-----------ARR10  --------->YAB1  --------->ANAC46  <---------bZIP60(2)   ttcaagtacctcatcttgattcttgagtttcttctctattcacgaaagataacaacaataagacgaaacgagaagtgatgatgtggagacagacgaatgt  11773100                                                             --------->ATHB51                                                            <---------YAB1                                               <---------CCA1(1)                                               <---------RVE1(1)                                              --------->ARR14(2)                                              --------->ARR14(3)                                              <---------ARR14(3)          ---------->DOF2                                              --------->ARR11(3)     --------->CCA1(2)                                   <---------ATHB12       <---------AHL20(2)  --------->ARR11(3)                                  ------>MYB83<---------ARR11(3)    <---------ARR11(3)                --------->YAB1    ------>MYB46(1)--------->GLK1(2)  --------->ARR11(3)               --------->ICU4    --------->WOX13(1)      --------->AHL20(2) --------->ICU4              <---------KAN4(2) --------->MYB46(3)       --------->ICU4<---------ANAC55(2)        --------->YAB1        ------->TEIL    <---------ARR14(2)  <---------TOE2(3)                 <  ----------->GT1           <-------TEIL    ----------->ARR10--------->ATHB12 <---------ARR11(3)  <--   gatatagaaataatagaatgatcaagaagatgcaccaatcaatgtgaagatattctatatttattattgagatatgtaaagatttgtagccatcttcgtt  11773200                                    ------>NtERF2                                   <---------DEAR3(1)                                   <---------ANAC46                                   <---------RAP2.6(2)                                  <---------LBD16                                 ------->GAMYB                                <------------AtMYB77                               <---------ZAT2                               ----------->RAV1(2)                      --------->ARR11(3)                               --------->ZAT2            --------->ANAC58                              ------>MYB83               --------->ANAC46             <---------DAG2                              ------>MYB46(1)  --------->AHL20(2)       --------->GLK1(2)           <          <-----------GT1     --------->MYB52(1)         --------->ANAC58             <----------DOF2 ------ZmHOX2a(1)           <---------MYB59  <----------DOF2            <---------ARR11(3) --------->ATHB12 -------TOE2(3)      *TSS<-----------GT1  <---------ARR11(3)           <---------GLK1(2)  <---------YAB1   taggaaaccatttcactatgtaagtaataacccaactgcggctagctctttaaatctccaagccttgattccaaaatctcgattctaactttatcatttg  11773300                                                ----------------->AGL3                                                =====================================================                                             <----------DOF2                --------------->AGL15       <---------ANAC58                <---------------AGL15       <---------ANAC58                ==================================================MADS_MADS              ------------>CBF          ------>ZmHOX2a(2)             <-----------GT1           <------ZmHOX2a(2)          <---------ICU4              <---------ARR14(2)         --------->ICU4               --------->ARR11(3)        <---------AHL20(1)            <---------ARR14(3)        <---------AHL20(2)            --------->ARR14(3)       --------->YAB1                 --------->ARR14(2)        ---------->DOF2 <---------ARR11(1)   --------->DAG2  <---------ARR11(3)       ---------->DOF2                     <- <---------ARR11(3)  ---------->DOF2  <---------AGP1 <---------AHL20(2)              <---------AHL20(2) --------->ARR14(2)--------->AHL20(2)<---------CCA1(2)       --------->LBD16        --------->AHL20(2) ---------CCA1(2)  --------->YAB1   ----------->ARR10--------->AHL20(2)---------->DOF2          <----   ccatatctataatatttacaataaaaagtatcacaccgtagatcttgctttccatttaaattccccaaaggcccaaagtactactataaaatttagttta  11773400                             <---------AHL20(2)               --------->ARR11(3)               <---------ARR11(3)              --------->RVE1(1)                                                                  ----              --------->GLK1(1)                                                             ---------              --------->CCA1(1)                                                             <--------              <---------CCA1(1)                                                             <--------              <---------GLK1(1)                                                             ---------             --------->ARR11(3)                               --------->AHL20(2)         --------->YAB1    <----------DOF2      --------->AHL20(2)                   <---------AHL20(2)        <---------AHL20(2)    <---------------AGL15<---------AHL20(2)                   --------->AHL20(1)        <---------YAB1 ===================MADS_MADS<-----------GT1        <----------DOF2    <---------ETT(2)--------->AHL20(2) ---------DOF2<---------RVE1(1)                 <---------CCA1(2)      --------->ETT(2)<---------AHL20(1) -------GT1  <---------ARR11(3)              <-----------GT1 --------->AHL20(2)        --------->AHL20(1)   tcttttcttttcaaagatatcttacatttatttacattgaatagttttttctatcttttcaaattttattatgtagacatatgtcaaaatataataaatt  11773500                                                                       <---------GLK1(1)                                                                       --------->GLK1(1)            - ------->GT1                                                          <---------ARR11(3)            < >AHL20(2)                                                            --------->ARR11(3)      ------- -AHL20(1)    --------->ARR11(3)                              <-----------GT1             <----------DOF2 -AHL20(2)    <---------ARR11(3)                              <---------AHL20(2)    --------->WRKY18(1) >AHL20(1)    --------->GLK1(2)                           <---------YAB1      --------->ARR14(2) <---   agttaatacatgtcaaaatcttataaattcttatcacatagtatatcactcttgaatgttatatttacataagatttccatttacgctcaagctttgttg  11773600                                 <----------DOF2                                      <---------TOE2(3) <---------ICU4           <---------YAB1                                        <---------AHL20(1) -------->ICU4          --------->YAB1                                          --------->AHL20(2) ---------YAB1         <---------YAB1                                           <---------AHL20(2) --->ID1            <---------AHL20(2)                                   <-----------GT1 ------YAB1         --------->AHL20(2)                       <---------YAB1     --------->AHL20(1)   tcattattccaaacttcttagttttattataaatactttctcattttcaaaattgtttttgttatttttgttatattacaaatttattaagaaataatct  11773700  Previous    Next  AGI:  At2g27535.1    Description:  ribosomal protein L10A family protein. contains InterPro domain Ribosomal protein L1; (InterPro:IPR002143) Range:  from: 11772400    to: 11773221    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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