Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      <---------MYB52(1)                                                                                  --------->ANAC58                                                                                  --------->ANAC58             <---------YAB1                  <-----------GT1                      --------->ANAC46         <---------MYB59             ------->TEIL         <---------ICU4     ----------->HVH21     --       -------->P                 <---------YAB1     <-----------GT1 --------->AHL20(2)         -----   acgttttgctacctgattattcatctaaaaccagtgatgaatgtgttatacaatttttcatgtttacacattttaaaaactgacccgctatgtttttcat  11768700                          <---------ANAC58                           --------->AHL20(2)                          <---------ANAC58                     ----------->GT1                     <---------DAG2                           ----------->GT1                     <----------DOF2                          <---------ZAT6                      <--                  <-----------GT1                         <---------ANAC58                   --------                  <---------AHL20(2)                      <---------ANAC55(1)               ---------       --------->WOX13(1) <---------AtLEC2                <---------YAB1                   ---------- -------->DOF2 <---------ICU4           --------->ANAC58  <---------ANAC58            ----------->GT1 ---->AtLEC2  --------->AHL20(2)        --------->ANAC58<-----------GT1          --------->AHL20(2)   tcaaagtatccatcaaatatttacttttgcatgttttttgacaagtaagtttgctatattacgagtgttaaaaatataacaaaaaaaatagtaaaaagtt  11768800                                                                              >>>>>>>>>>WRKY63                                                    <---------AHL20(2)  <---------YAB1                                            <-----------GT1          <---------AHL20(2)                                       <---------AHL20(2)           <---------WOX13(1)         <----- -------YAB1                           --------->AHL20(2)          <------------CBF      --------->AHL20(2) --->GT1                              <---------AHL20(2)       --------->At4g35610       --------->ATHB51 >DAG2          <----------DOF2       <---------AHL20(1)       <---------At4g35610      <---------MYB52(1) >DOF2 ---------->DOF2 --------->YAB1 --------->AHL20(2)  <----------DOF2     <-----------GT1<-------   attaatcttgaaagttagctttgtatgatgaccctgctaatttttttatcaagtttaattctttcagctaattgattatttgactattccattatttact  11768900                                                                                     ----------->GT1                                              <---------YAB1                        ----------->GT1                                           --------->ICU4                          --------->DAG2                                           <---------YAB1                         ---------->DOF2                                         --------->YAB1                         <------ZmHOX2a(1)                                         <---------ICU4                    ------>MYB83                                         -------->ATHB1                    ------>MYB46(1)                     ----------->GT1    <---------ATHB51                 --------->TOE2(3)  <-------GAMYB  --------->MYB59        <---------AHL20(2)               <---------MYB59        <---- ----YAB1       --------->ZAT14         --------->ICU4                  ----------------->AGL1  ----- ----GT1       <---------MYB52(1)       --------->AHL20(2)--------->AHL20(2)   <----------ID1<-------   attcggttgatatttcagttaagtcgataattttggacacaaattattattagggactaaataaaaactagaaaacctaataggaaaaggaaatactttt  11769000                                <-----------GT1                                                    --                               --------->AHL20(2)              <-----------TBP                     --                         --------->YAB1                       <---------------AGL15             <----                         --------->TOE2(3)                 ---------->ID1        <---------ANAC55(2) ----------->GT1        ----------->GT1     <---------AHL20(2)------>ZmHOX2a(1) <-------------------- -----AHL20(2)         <---------TOE2(3)    --------->AHL20(2)--------------->AGL15  ---------->DOF2 ---->AHL20(2)     --------->TOE2(3)    <----------DOF2<----------DOF2   ----------->GT1     -------- ---DOF2 --------->TOE2(3)     <---------AHL20(2)<-----------GT1       ---------->DOF2    <----------DOF2   aaatgggaaaacataaataaaacttaatgttaattaatctttctttttaattaacctctttgtccttatataagaaagtgaaaacgtgaaagcttttata  11769100                                                                <------MYB83                                                               --------->MYB111(1)               <---                                     --------->YAB1            --------->MYB59                  -----                         ----------->GT1                    <---------ARR14(2)                -------     --------->ARR11(3)  --------->ANAC58         ------>ZmHOX2a(2)                         ---------     <---------ARR11(3)  <---------ANAC55(2)    <---------ARR11(3)                         --------->ANAC46 ------->TOE1(3)         --------->ANAC58       --------->ARR11(3)  <---------At4g35610    --------->LBD16 ------->TOE2(3)      <------ZmHOX2a(2)         <---------ARR14(2)  --------->At4g35610    --------->ANAC58 -------GT1          --------->ARR11(3)        <---------CCA1(2)<------MYB46(1)            --------->ANAC58 ---TaNAC69(2) <----------DOF2  ------------>CBF--------->ARR14(2)<--------P              <---------LBD16 ->YAB1    --------->GLK1(1)   <<<<<<<<<<<<<<<<<LFY         --------->ARR14(2)            --------->HSFB2a(2)   accctaatatctgatttcttttagatcaagtaaaaacaatggtgagattggatcttccatgggatttggtagatgaaatactctctcgacttcccgcaac  11769200                                                         --------->GLK1(1)                                                         <---------GLK1(1)                                                     --------->ANAC55(2)                                                     <---------ANAC55(2)                                                     --------->HSFB2a(2)                                                     <---------HSFB2a(2)                           <-                                                    <---------LBD16                                <-                                                    ------>ZmHOX2a(2)                           -----                                                   --------->ARR14(1)                           -----                                                   --------->CCA1(2)                           <-----                                                   <------ZmHOX2a(2)                           ------                                                  <---------ARR14(2)                           ------                                                  --------->ARR14(2)                     --------->ANAC58                      --------->ANAC58            --------->ARR11(3)            --------->DAG2 ------                      --------->ANAC46            --------->AGP1               ---------->DOF2 <----- ------ARR11(3)       --------->ANAC58            <---------ARR11(3)--------->ANAC58     --------->ANAC58 ---->REM1(1)         --------->AtLEC2            --------->ARR11(1)--------->ANAC58   ---------->DOF2 ---->RAV1(1)<---------YAB1                   ---------->DOF2     ---------->DOF2    --------->At4g35610 >LBD16<---------ETT(2)                <----------DOF2--------->LBD16     --------->AHL20(2) --------   atctctaggtcgactacgatttacatgcaaacgatggaatgctttattcaaagatccggaattcatcacaaagcaatttcataaagcagcaaagcaagat  11769300 -----MYB83 -----MYB46(1) ---->ARR14(1) ---->CCA1(2) ----ARR14(2) --->ARR11(3)                                   ---------->DOF2 --->ARR11(1)                                --------->TOE2(3) --->ARR14(2)                              ------>MYB83              --------->AHL20(2)            <- ----ARR11(3)    --------->ICU4            ------>MYB46(1)     ----------->RAV1(1)     --------->ATHB12 --->ARR10  ----------->GT1               --------->WOX13(1)  --------->MYB46(3)      <---------YAB1   ttggttctcatgttgagtaattttggggtttactcgatgagtaccaatctcaaagaaattcccaacaacattgaaatagcgcaagtttttcattgcaacg  11769400                                                         --------->REM1(2)                                                         --------->ZAT14                                                       --------->LBD16                                                      <---------ANAC55(2)                                                      <---------ANAC46                                                      <---------ANAC55(1)                                                      <---------ANAC58         ------>ZmHOX2a(2)               --------->ANAC58                       <---------ANAC58       <---------ARR14(2)               --------->ANAC58                    <---------ARR14(2)      <---------MYB46(3)               --------->ANAC46             <-------GAMYB<---------ZAT14  --------->ALFIN1              <---------LBD16      <---------ZAT14 --------->GLK1(2)    --------->ZAT2           <---  <---------YAB1       ----------->GT1     <---------MYB46(3)  <-----------HVH21        <---------ARR11(3) ---------DOF2--------->LBD16      --------->ZAT14 --------->ARR14(2) <-----------RAV1(2)  --------->ICU4   gcttattgttatgttccacggaagagggtaacaagactaaactcgtggttgtgaatccgtgtactggtcagaccaggtggatcgaaccaagaactgatta  11769500                                                                   --------->ARR14(3)                                      --------->At4g35610  --------->At4g35610                           <---------HSFB2a(2)             <---------At4g35610  <---------ANAC46                           --------->ANAC55(2)        --------->ANAC46          <---------ANAC58           --------->ARR11(3)        ------->GAMYB    --------->ANAC58          <---------ANAC58         <---------YAB1    <---------ANAC55(2)        --------->ANAC58          <---------ANAC55(2)       <---------ICU4      --------->ANAC58        --------->TOE1(2)            <---------ANAC55(1)       --------->YAB1      <---------ANAC46        --------->TOE2(2)            --------->ANAC55(2)      --------->ICU4       --------->ANAC58        <---------SPL7  <---------ARR11(3)    --------->YAB1        <---------LBD16        <---------------AtSPL3    <------ZmHOX2a(1)   <---------YAB1        --------->MYB52(1) --------->ANAC58       --------->GLK1(2)<---------AtMYB61  --------->AHL20(2)    <---------ARR14(2)  --------->ANAC58       --------->ARR11(3) --------->YAB1   <----------DOF2 ----------->RAV1(1) ----------->HVH21  <---------TOE2(3) ------YAB1<---------ARR11(3)     --------->MYB52(1) --------->SPL7<---------ARR14(3)<---------MYB46(3)   caattataatcatgatatcgctctaggttacggaaacaacagcaccaagaaatcgtacgacagctacaaaatcttgaggattacgtatggttgcaaactc  11769600  Previous    Next  AGI:  At2g27520.1    Description:  F-box family protein. Identical to F-box/LRR-repeat/Kelch-repeat protein At2g27520 [Arabidopsis Thaliana] (GB:Q9ZNQ3;GB:Q58G06); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G17490.1); similar to class S F-box protein [Nicotiana alata] (GB:ABR18787.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 11769139    to: 11770182    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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