Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         ---------->DOF2                    ----------->GT1         --------->ANAC58                  <---------ZAT14           --------->ANAC46                  --------->ZAT14           --------->ANAC58               <---------ANAC58      <---------ICU4               <---------ANAC58     <---------YAB1  ---------->DOF2       --------->TOE1(2)     <----               <---------ANAC46     <---------AHL20(2)                  <-------TEIL     --------->AHL20(2)       <---------AHL20(2)--------->ICU4   <-----------GT1  --------->AHL20(2)            <---------AHL20(2)   tcaattgatttttttttgtgtgtagtaaagatgtgtttataatttcactcaatgtaaagaatttaacagatagtttcatacgaactaatatttaaaaata  11763400                                                      <---------------AGL15                                                      --------------->AGL15                                                     <-----------------AGL3                                                  <---------ZAT18                           <<<<<<<<CAMTA3                   <---------YAB1              <---------ANAC46                            ------->MYC3        ==============================================================MADS_MADS            <-------MYC3        --------------->AGL15             --------->CCA1(2)                               --------->ANAC58     --------->ARR11(3)                  --------->ARR11(3)                               --------->ANAC58     <---------ARR11(3)     <---------WOX13(1)--------->ALFIN1                          <---------ALFIN1   <---------AHL20(2)    <---------YAB1  <---------ARR11(3)                       <---------ICU4  --------->AHL20(2) --------->ARR11(3)----------->ARR10<---------YAB1            --------->YAB1 ---TEIL<---------------AGL15     --------->ICU4  --------->ZAT18       <---------KAN4(2) --------->ANAC46   catataaaatctaaaattagtatgattttgatggacatgatgagatatgtggtgaactattatgggcaagagggaatcatctagtcatgaccacgcgttc  11763500                                              ------------>CBF                                         --------->AHL20(2)                                         --------->AHL20(1)                                         <---------AHL20(2)                                        --------->AHL20(2)                                      <----                                        <---------AHL20(2)                                      <----                                    --------->AHL20(2)                                      ---------                                 <---------ANAC58                                      <---------AHL20(1)                                 <---------ANAC58                                      --------->AHL20(1)                                 <---------ANAC46                                     <---------AHL20(2)                  --------->At4g35610  <---------AHL20(1)                           ----------->TBP                  <---------At4g35610 --------->YAB1 <-----------RAV1(1)          <---------------AGL15        --------->GLK1(2)    <------------CBF<-----------GT1    --------->AHL20(2)--------------->AGL15   cactgaaaataatctatatgagctccactaaaattgcttaaaataatttacaattttgttgcaaaaaaaaatcgctaatgccttctatatatattaaagc  11763600                                                                    <---------WOX13(1)                                                                   <------------CBF                                                                   <---------ANAC58                                                                  --------->ATHB12                  <                                                               <------------CBF              <-------                                                              --------->ATHB12          <------------CBF -----ANAC58                                       <---------ANAC46<---------ANAC58    --------->ATHB12 -----ANAC58    <----------DOF2                    <-------GAMYB<---------WOX13(1)   <----------DOF2- ->DOF2   ----------->GT1              <---------ZAT6        <---------YAB1  --------->ANAC46<-------   ttgtgctccattttgtaacttttatatgctaatctaatatagtcttaaatgtgagttgtatttttcattgattgcatataagacatgctttattgacttg  11763700                ------>MYB46(1)                ------>MYB83              <---------MYB59          ----------->HVH21        <---------At4g35610        <------ZmHOX2a(2)        --------->At4g35610        ===========================HOX2a_HOX2a       <---------ARR14(2)       --------->GLK1(2)       <---------AGP1       --------->ARR11(3)       <-----------ARR10                         ---------->DOF2       <---------ARR11(3)                  --------->ZAT18       --------->ARR14(2)                  --------->ZAT14      <------ZmHOX2a(1)                    <---------ZAT14     --------->HSFC1(2)            <---------ANAC58     --------->HSFB2a(1)           <---------ANAC46     <---------HSFC1(2)            <---------ANAC58                   ---------->DOF2 ---------HSFB2a(2)              <---------AHL20(2)                <-----------HVH21 --ANAC58==========================HOX2a_HOX2a--------->ANAC58<---------ANAC58                      - -------->HSFB2a(2)         <------ZmHOX2a(1) --------->ANAC58<---------ANAC58   --------->GLK1(2) <- --ANAC58------>ZmHOX2a(2) ----------->GT1 <---------ZAT18<------ZmHOX2a(1)--------->ALFIN1    ------   ttcgcgaaggatctgacctaatcgaagtcaggaaattacttggagagcactcaaagaacaggatgcttatgtcaaaggtggagaatcaagagtgatgaat  11763800                                <---------ARR14(2)                   <---------MYB52(1)                                --------->ARR14(2)                  <-------GAMYB                          --------->ZAT2    --------->TOE2(3)      <---------ANAC46          <---------YAB1  <---------ZAT2    --------->TOE1(3)   <---------ARR14(2)      <---------GLK1(2)   <---------At4g35610                   --------->GLK1(2)    ----------->ARR10     --------->At4g35610            <-----------RAV1(2) -------->ATHB12   --------->YAB1        <---------CCA1(2)      --------->ARR14(2) --------YAB1     <-------TEIL  <---------GLK1(2)     <---------ETT(1) ->TEIL--------->GLK1(2)<--------P     --------->YAB1 ----------->HVH21                      --------   tttgattagattctgatgcattcatggtagctcggatactctcataccttaaacttccgacaggcgattccgttaagacgagcgttttgtcgaagagatg  11763900                                                              <------NtERF2                                                             --------->LBD16                                                            <---------DEAR3(1)                                                            <---------ANAC46                                                           <------NtERF2                                                           <---------------------WRI1                                                           --------->ATERF1(1)                                                           <---------LBD16                                                          <---------ERF1                                                          <---------RAP2.3(1)                                                          <---------RRTF1(1)                                                          ------>NtERF2                                                         <---------bZIP60(1)                                                         <---------O2                                                         <---------ANAC46                                                         <---------RAP2.6(2)                                                         <---------RAP2.3(2)                                                         <---------DEAR3(1)                                                         <---------ATERF1(2)                                                         --------->ATERF1(2)                                                         <---------RAP2.3(3)                                                         <---------RRTF1(2)                                                      ----------->TGA1                                                      ----------->HVH21                                                    <---------ANAC58                    <-------MYC4                                                    --------->TGA1a                     ------->MYC3                                      --------->TGA2(2)  <---------RRTF1(3)             ------->MYC2                                     <-----------TGA1<-----------HVH21                  <-------MYC2                                    <---------O2    --------->ANAC55(2)                 <-------MYC3                                    --------->bZIP60(2) --------->RAP2.6(3)           ------->TEIL                                    --------->O2    <---------O2                   --------->AtLEC2                                    --------->ANAC46<---------TGA1a             <-------TEIL                                    --------->ANAC58--------->O2          <---------ANAC46        <--                                    --------->ANAC58<---------ANAC58      <---------ANAC58     <----- ->CCA1(2)  --------->MYB52(1)     <-----------STF1 <---------ANAC55(2)   <---------ANAC58     ------   ggaatttctctggctaatggtttcaagtttggacttagacgtcatcaacttgtctcgtgacggcggagaagccttggcgaggttcatgcacatgtttcta  11764000                   <---------ICU4                  <---------YAB1                --------->YAB1             --------->YAB1                                      ------->TEIL        --------->ALFIN1                                    <---------ICU4       --------->LBD16                                     --------->ICU4      <---------ANAC46                                 <-----------------AGL2                       - -------ZAT6<------ZmHOX2a(2)             --------->DAG2 --------->YAB1                           --- ----HSFB2a(2)  <---------ICU4           ---------->DOF2<---------YAB1             --------------->AGL15 --->HSFB2a(2) <---------YAB1---------->DOF2        --------->KAN4(2) <----------DOF2       ---------   gagttgaaccgtggatcatcatcatgcctgtaaaagttcaagataaagtatgctcattctcataatggacttctttcgattttgtccaagaagagaaagc  11764100                                                                 --------->GLK1(1)                ---                                                               <------NtERF2                      <--                                                              --------->LBD16                    <---                                                          --------->ANAC46                     ------                                                          <---------DEAR3(1)                  <------                                                         <---------LBD16                      <------                                          <---------GLK1(1)  <---------DEAR3(1)               -------                                         <---------ARR14(2)  <---------ANAC46 --------->ARR11(3) <---                                    <---------ANAC58   <---------ZAT14        <---------ARR11(3)<----                                    <---------ANAC46   <---------WRKY38(1) <---------HSFB2a(2)------- -------->RAP2.6(3)     ---------->DOF2  --------->ARR14(2) <---------LBD16--------->HSFB2a(2)------- -------->TGA1    --------->At5g28300 --------->ALFIN1 --------->ZAT18  <---------ARR11(3)   <------- ->DOF2          ----------->GT1    <---------ANAC58   <---------WRKY12 --------->ARR11(3)   <-------   atgacgactccatggacgactgtaacaaaagagtcatggagtggatagccgaagtagtccacggcggagttcaacatctagatgttgatgccaaaacgtg  11764200 ------>LBD16 -------ANAC46 ------ANAC58 --->ALFIN1 -MYC2 -MYC3 >MYC3 ------ANAC58 -----LBD16                     --------->ZAT18                                                    <- >MYC2               --------->CCA1(2)                                  <---------YAB1         <----- -->TOE1(2)         <---------ARR11(3)                      <---------ANAC58                --------- --ANAC58           --------->ARR14(2)         <---------DAG2 --------->AtLEC2        --------->ANAC58 --ANAC58         --------->LBD16           <-----------GT1 <---------ANAC58          --------->ANAC58   cgggataattcaatctcatccagatatatataagagcacaatgtgttcaccttctgtagattccatgcctaagtatgtttatgtgagcaagacagtggtg  11764300  Previous    Next  AGI:  At2g27505.1    Description:  similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G44950.1); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 11763824    to: 11764907    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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