Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      <---------ARR14(2)    <---------ARR11(3)   --------->At4g35610                                        --------->ARR14(2)    --------->ARR11(3)   <---------At4g35610                                        <---------GLK1(2)   --------->YAB1   <---------ANAC58                                   <---------ARR14(2) -------->YAB1      <---------ANAC58              ----------->GT1      <---------GLK1(2) ----->YAB1         <---------ANAC46       <---------ANAC46            --------->ARR11(3)         --- ------>AGL1   <----------DOF2          --------->TOE2(2)              --------->ARR14(2)        ----   aagaatgatattagctcctttagcgtgagcttctctgactaatctgcgtaaaatgtaaacaattccattctcagatactgaaatcggattcgaacggggg  11746400                                                      --------->AHL20(2)                                                      --------->AHL20(1)   --------->ANAC46                                                --------->YAB1             --------->ANAC58                                           --------->LBD16                <-----------------AG                                          --------->ANAC55(2)      --------->GLK1(2)                                          <---------ANAC58     <---------HSFB2a(2)                                          <---------ANAC55(2)  --------->HSFB2a(2)----------->GT1                                          <---------ANAC46  <---------ANAC58    <-------MYC3                                          <---------ANAC58  <---------ANAC58    ------->MYC3        <                                         <-----------------------TaNAC69(2)--------->ANAC58      <--- ------>GLK1(2)                    ---------->DOF2    <---------AHL20(2)<---------ARR14(2)     ------ ----->GLK1(1)     --------->AHL20(2)    <-------TEIL <---------AHL20(1)--------->ARR14(2)    <------ZmHOX2a(1)   aatctatatcagagcttgaaattgaatagttcgattccaaaggtccgtgatcacaataaattgctcgagaagcttatacgcatatggaaatttgaaggag  11746500                                                                       ----------->RAV1(1)                                                                       ------>NtERF2                                                                      --------->DEAR3(1)                                                                      ----------->HVH21                                                                     --------->ATERF1(1)                                                                     --------->RRTF1(1)                                                                     --------->RAP2.3(1)                                                                     <------NtERF2                                                                    <---------RRTF1(1)                                                                    <---------ERF1                                                                    <---------ORA47(2)                                                                    <---------RAP2.3(1)                                                                    <---------RAP2.6(1)                                                                    ------>NtERF2                                                                    <---------ATERF1(1)                                                                    <---------DEAR4(2)                                                                   <---------DEAR3(1)                                                                   <---------RAP2.3(2)                                                                   --------->DEAR3(1)                                                                   <---------ANAC46                                                                   <---------ATERF1(2)                                                                  <---------ABI4(1)                                                                  --------->ATERF1(1)                                                                  --------->RAP2.3(1)                                                                  <------NtERF2                                                                 <---------DEAR4(2)                                                                 <---------ATERF1(1)                                                                 <---------RAP2.3(1)                                                                <---------RAP2.3(2)                                                                <---------DEAR3(1)                                                               --------->At4g35610                                                             ---------->CDC5                                                           <-----------HVH21                      ---                                                          --------->At4g35610        <---------GLK1(1)                                                       ------->TEIL<---------RAP2.3(3)     <---------DEAR3(1)                   <---------ICU4                     --------->MYB52(1)            <---------ARR11(3)                  --------->ICU4                      <---------ARR14(2)     <---------MYB46(3)   ---                --------->YAB1                        --------->ARR14(2)<------NtERF2--------->GLK1(1) ------ZmHOX2a(1) <---------YAB1                  --------->CCA1(2)--------->ATERF1(2)   <-----------HVH21 ---ZmHOX2a(1) ----------->GT1                   <----------ID1<---------At4g35610  --------->ARR11(3) --->ALFIN1   <---------WOX13(1)       <------ZmHOX2a(1)--------->MYB46(3)  <---------AtMYB61<------NtERF2   gaggaagatgggagagattgataattagagagagggagggaggaagagagagagacgaaccgctcagcggcggcgacattggtggagatatcgtcggagc  11746600                      <---------ALFIN1                     --------->MYB46(3)           --------->At4g35610           --------->CCA1(2)                 <---------MYB52(1)                                    <- ------>ANAC58      -------->P             <---------ANAC58             <XXXXXXXXXXXXXXXXXXXXXMIR2936 ------>ANAC58    --------->MYB46(3)       <---------ANAC58     <----------DOF2         --------->ZAT14   aagcgaattggagagatgaaacaaccacttctcgtcttcttccttccgtttccattgtttctctctctttctctgtgttttttctcacagtgaaggaatt  11746700                            ----------->HVH21                          <---------At4g35610                          <---------ZAT2                          --------->ZAT2                          --------->At4g35610                        <--------P                     <---------TOE1(3) <------ZmHOX2a(1)   --------->DAG2  ----------->HVH21                             <----------DOF2 --------TOE2(3)     <---------TOE2(3)                              *TSS        <-----------GT1    --   taaggacgctcaaaatcgaatataaggtagctgactcatttgactgtgactagcagagagaacaaaatagaacagaacattttttcttttccaaaatcga  11746800                          --------->ANAC58                          --------->ANAC58                          --------->ANAC46                    --------->ANAC58               <------------CBF                        ------>ZmHOX2a(2)              --------->ANAC58           ---------->DOF2                                  <------ZmHOX2a(2)              --------->ANAC58        --------->ANAC58                                   <---------ARR14(2)    <---------ANAC58--------->ANAC58  --------->ANAC58                                   --------->ARR14(2)    <---------ANAC58--------->ANAC46  ----------->GT1                                    <---------ARR11(3) -------->DOF2--------->ANAC46     --------->DEAR3(1)                          <---------YAB1------>ZmHOX2a(1)   ataaaggcgttcacaaacgcaaacgcaaacgcaaacgcagacgtaaaaccccaaattgagttggaacattttagatgttttatgaatgagggatcctaat  11746900                                                                                          xxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                    <------MYB83                                                                                    ----------->GT1                                                                                    <------MYB46(1)                                                                                   --------->MYB55(2)                                                                                   <---------MYB46(3)                                                                                  <---------ANAC46                                                                                <------MYB83  <------                                                                                <---------MYB46(3)                                                                                <------MYB46(1)                                                                               <---------AtMYB61                                                                               <---------MYB46(3)  <-                                                                              <--------P---------->DOF2                                                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                --------->ANAC58            --------->ALFIN1 <<<<<<<<                  <---------GLK1(2)             --------->ANAC58            <-----------RAV1(1)   <--            <---------YAB1                      --------->ANAC46           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)   ccttgtatggtcttattttagattcttctacacttatctactatatgcacaagacataaacaagttgatacaaaataagtgttggtgggtaaaagttaca  11747000                                                                              xxxxxxxxxxxxxxxx>smallRNA(i)                                                                          --------->MYB52(1)                                                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                       --------->YAB1                                                                      <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                        <xxxxxxxxxxxxxxxxsmallRNA(i)                                                        xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                    xxxxxxxxxxxxxxxx>smallRNA(i)                                                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     --------->TOE1(2)                                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <---------LBD16                <---------------AGL15     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    <xxxxxxxxxxxxxxxxsmallRNA(i)          --------->YAB1                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  xxxxxxxxxxxxxxxxxxxx        --------->AHL20(2)<xxxxxxxxxxxxxxxxxxsmallRNA(le3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxx>smallRNA(si3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)  xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxx>smallRNA(si3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxx -TEIL <---------AHL20(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) --------MYB46(3)  xxxxxxxxxxxxxxxx>smallRNA(i) --------->MYB52(1) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <<<<<<<<<LFY<-----------GT1  <---------ICU4 --------->YAB1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -------AtMYB61<-----------------AGL3  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   ttggtggatttaaaataactaaacttggaacataatcacttagaacataataactgaagagaaaccagagacataataactgaagagaaaccagggacaa  11747100                                                                                                  <--                                                                                         <xxxxxxxxxxx                                                                                   <---------GLK1(1)                                                                                   --------->GLK1(1)                                                                                   <---------At4g35610                               --------->HSFB2a(2)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                          --------->HSFC1(2)       <---------------AtSPL8      --------->ANAC46<-----                          --------->HSFB2a(1)     --------->YAB1         --------->GLK1(1)<xxxxxxxxxx                          <---------HSFB2a(1)    <---------ATHB51        <---------GLK1(1)<xxxxxxxxxx                   --------->YAB1                <---------ATHB12      xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)          <---------------AtSPL8          xxxxxxxxxxxxxxxxxx>smallRNA(le3)    ------>ZmHOX2a(1)------          --------------->AtSPL8    --------->MYB46(3) ------->TEIL  --------->LBD16    ----------->RAV1(1)         <---------ANAC46 <---------HSFC1(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)xxxxxxxxxxxxxxxxxxxx xx>smallRNA(si3)  --------->ATHB51 <---------ATHB12   <-------TEIL <---------ANAC46xxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxx>smallRNA(i2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <---------LBD16 --------->At4g35610   tatttcaattggtttgtacaataatcgaattttctgcaaccatgccttccaataatgtacatcatgttctccgtgaaatcctcgcatctcccacaataca  11747200        <----------DOF2                                                                             -    <----------DOF2                                                                                 < <-----------GT1                                                                                   <- -------ICU4                                                                                       -- xxxxxxxxxxxxsmallRNA(l2)--------->GLK1(2)                                                      ----- ----ANAC55(2)           --------->ARR11(3)                                                     <---- xxxxxxxxxxxxsmallRNA(si3)                                                                      <---- xxxxxxxxxxxxsmallRNA(le3)                                                                      ----- --->ANAC55(2)        <---------AHL20(2)                                <-----------GT1         <---- xxx>smallRNA(s2)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                  --------->YAB1  ------>ZmHOX2a(2) xxxxxx>smallRNA(fl3) --------->AHL20(2)                           ----------->GT1      =============   taatcactttcttttcttcatcaataaaatctgtattcgactaaacaatctcttacctagaaaactagaaggtataacaatattcagtgatccaacaaga  11747300  Previous    Next  AGI:  At2g27450.1    Description:  NLP1 (NITRILASE-LIKE PROTEIN 1); hydrolase, acting on carbon-nitrogen (but not peptide) bonds. Identical to N-carbamoylputrescine amidase (CPA) [Arabidopsis Thaliana] (GB:Q8VYF5;GB:Q9ZQH4); similar to BETA-UP (BETA-UREIDOPROPIONASE), beta-ureidopropionase [Arabidopsis thaliana] (TAIR:AT5G64370.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48729.1); contains InterPro domain Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; (InterPro:IPR003010) Range:  from: 11744512    to: 11746768    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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