Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->AHL20(2)               <---------ANAC55(2)                                    <---------------AGL15             --------->MYB59                                    --------------->AGL15    <------ZmHOX2a(1)                                   =================================HOX2a_HOX2a    <---------AHL20(2)             ------>ZmHOX2a(2)        <---------YAB1    --------->AHL20(2)           <---------ARR11(3)       --------->YAB1             --------->AHL20(2) --ARR14(2)                      XXXXXXXXXXXXXXXXXXXX>MIR869.2    <---------TOE2(3)  --------->YAB1 ->ARR11(3)             <---------ATHB12              --------->AHL20(2)        ----------->GT1 ->ARR14(2)  ----------->GT1     --------->ARR11(3)   <---------AHL20(2)  ---------->DOF2 ->AGP1 <---------AHL20(2) <---------GLK1(1)         --------->AHL20(2)--------->ANAC55(2)    <------ZmHOX2a(1)   agctatatatataatgggtttaaacaatgaattctgatcttaaaatagttatcgatttaattaggattaagttaagtaaagaaggaataatatggaggag  11741500                                 --------->AtLEC2                                 --------->ANAC58                                 --------->ANAC46                                 --------->ANAC58                                ------->MYC2                                ------->PIF5                                <-------PIF4                                ------->PIF4                                <-------MYC3                                <-------MYC2                                                      ---                                ------->MYC3                                              --------->ATHB12                     --------->ANAC58                                                   --------->ARR11(3)               <------ZmHOX2a(1)<-------PIF5                                    --------->At4g35610         --------->ANAC58     ------->TEIL                                      <---------At4g35610         --------->ANAC58   <---------ZAT18                             <---------TOE2(3)<---------YAB1    <----------ID1<------NtERF2 <-------MYC4                            <---------TOE1(3)<------ZmHOX2a(2)    --------->ZAT18  --------->ANAC58              ---------->ID1       --------->DAG2  <---------ARR11(3)   aagaaggggacaagcgaggaggcaagctaatgcacatgcaagagaacagttttgtctcttctaaatctcaccataaggttacagcagagagatcattgaa  11741600                                                       --------->ALFIN1                                                       <---------ANAC58                                                   <---------ANAC58                                                   <---------ANAC46                                                   <---------ANAC58                                                  <-------TEIL                                                <-------MYC2                                                ------->MYC2                                                <-------MYC3                          --------->AtMYB61                                      --------->AHL20(2)                       <---------SPL7                       <---------GLK1(2)        ------->MYC3  <---------At4g35610    <---------------                     <---------AHL20(2)    <-----------GT1    --------->At4g35610--------->SPL7                    --------->AHL20(2)<---------AHL20(2)  <-----------HVH21 <---------------------WRI1 ------>ZAT6     <----------DOF2    --------->TOE2(3)  <---------ANAC58    --------->TOE2(2)    -----   acactaaaactaatactctcttttaaattctcttgtttcattaattaacacgttcgtgtgtgtcagttccaacttaacctcggtacgaccaaagatggcc  11741700                                       <------ZmHOX2a(1)                                     <---------TOE2(3)                            ---------->DOF2   <---------ANAC58       <---------AHL20(2)            <---------YAB1           --------->AHL20(2)   <---------ANAC58       --------->AHL20(2)       --------->YAB1            --------->ICU4     ----- --AGL1                   --------->YAB1          --------->ICU4    <---------YAB1   <-----------GT1 ------>RAV1(1)        --------->WOX13(1)       ---------->DOF2  --------->ICU4  <---------AHL20(2) -   acatttcttgtttagaaaaccacatcaattaaaagtgtttaggaaattggcaaagatgaccattgaaatgatttttgccacgattaatttccatttttta  11741800                                   <---------AHL20(2)                               <---------AHL20(2)                               --------->AHL20(2)                         --------->TOE2(3)                        ----------->GT1                    --------->AHL20(1)                                     <---------AHL20(2)                    <---------AHL20(2)                                    <---------AHL20(2)                    <---------AHL20(1)                                    --------->AHL20(2)       <------MYB83--------->AHL20(2)                              --------->HSFB2a(2)       <------MYB46(1)<------------CBF                        <------------CBF   *TSS<-----------GT1 ---->MYB52(2)     <---------AHL20(2)  <---------AHL20(2)    --------->ATHB12  ----------->GT1 <----- ----------->CBF   --------->YAB1 <---------AHL20(2)----------->GT1<---------HSFB2a(2)        -------   gttgcaatttggtttatgaaattatattgttaattttttatttttttgatcaaactgtaaacttcattgctagaaattaaatggtttttacatcagagaa  11741900                                              <------MYB83                                              <------MYB46(1)                                             --------->MYB59                                   <----------CDC5                                       ----------->RAV1(1)                                  <---------At4g35610                                    ============                                  --------->At4g35610                                   --------->ANAC58                                --------->MYB46(3)                                      --------->ANAC46                              <---------ARR14(2)    --------->ANAC46--------->GLK1(2)   --------->ANAC58                         ---------->DOF2   --------->CCA1(2)  ----------->RAV1(1)     <---------DOF5.7(2) ------------------TaNAC69(2) --------->ARR14(2)    <----------ID1 <---------GLK1(2) --------->ZAT18 -->ZAT14         <----------DOF2 --------->LBD16<---------WRKY12------->GAMYB--------->CCA1(2)  <---   gtccaaagaaaacagagcctctttggctaaagcatccgctgagagatttggtaaacgaaaaatacaacagaatttgaaagatagaagtgaacgacacaaa  11742000                                                                               ---------->DOF2                                                                          <---------ANAC46    -------                                 --------->AHL20(2)                       <---------ANAC58    -------                    --------->MYB52(1)                                    <---------ANAC55(1) -------         --------->ICU4        <---------------AGL15                      <---------ANAC55(2) <------    --------->bZIP60(1)        --------------->AGL15                      ----------------->AGL1<----    <---------bZIP60(1)        <----------DOF2                            <---------ANAC58   <-------TEIL    --------->TGA2(1)    <---------GLK1(2)       ---------->DOF2     <---------ICU4      <-----------    <---------TGA2(1) --------->YAB1           <---------AHL20(2)    --------->ATHB12    --------->MYB59 ========RAV     <---------At4g35610          --------->AHL20(2)   <----------DOF2       <----------- --------RAV1(2) --------->At4g35610   --------->ANAC46         <---------ARR11(3)--------->ANAC46 <-   caggtgatgtcatgaagacatctaacagaatttctttatataggccaatttaaaagtgtttggcaatttctttattgcgtataaaggcaactaggtacgt  11742100       <---------LBD16                     <---------ZAT18 -->ANAC55(2)                             ----------->HVH21 -->ANAC58         ---------->DOF2  --------->ANAC58 -->ANAC58         ===========================bZIP_DOF ---ANAC55(2)    <----------DOF2    --------->ANAC58                                              --- -----MYB52(1)   =============================bZIP_DOF                                       -------- ----AtSPL8<---------TOE1(2)        --------->TGA1a                                         <-------- ----AtSPL3<---------DEAR3(1)    --------->WRKY18(1)                   --------->ICU4       --------- --------ANAC46<-------TEIL     <-----------HVH21               <---------YAB1    ----------->RAV1(1)   tactcgtatttcggaggtgcttaaagtaaactagggtcaagtcagtgaccttgatacttcgtttttatgagaaatgttgatgtccaacattgtaatgata  11742200                          ------>ZmHOX2a(2)                         <------ZmHOX2a(2)                        --------->AGP1                        <---------ARR11(3)                        --------->ARR11(3)     ===========================HOX2a_HOX2a     ------>ZmHOX2a(1)  <---------AGP1     ============================HOX2a_HOX2a                                                  <------ ------->DOF2       ---------->DOF2                                                        <---------YAB1 ->YAB1         --------->At4g35610                                                        --------->ICU4 -YAB1          <---------At4g35610  <-------TEIL                                        --------->YAB1 >ICU4     --------->YAB1--------->CCA1(2)                         <---------MYB52(1)   <------ZmHOX2a(2)   taaagtcctacaatcttcagcataaagatctatgtaaggctcgtgttctatagtatgaacacctagacagtttgtttcgaagaaaattggatcatgatca  11742300                                                   --------->ARR14(2)                        ------>NtERF2                                                   <---------ARR14(2)                       <--------                            <-----------GT1       <------ZmHOX2a(1)                         ---------                  --------->ZAT18         <---------GLK1(1)                               <---------At4g35610                  <---------ZAT14        <---------ZAT18                                  --------->At4g35610              --------->ATHB12           <---------SPL7                                 <------ZmHOX2a(1) ---YAB1 <---------ATHB12 <---------AHL20(2)   --------->LBD16                      <---------O2<----   aagaattgcaaatgaatgagtagactatataaactagtcatagggtacccgaggattcgaattctatatcaacaagctcatcactcacgaggagcggact  11742400  Previous    Next  AGI:  At2g27440.1    Description:  pseudogene of rac GTPase activating protein Range:  from: 11741881    to: 11744413    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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