Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               <<<<<<<<<ARR2                                                                             <<<<<<<<<ARR1                                                                 --------->At4g35610                                                                 <---------At4g35610                                                                 <---------ZAT2            <---------TOE1(2)                                                                 --------->ZAT2        ------>ZmHOX2a(1)                                                            --------->WOX13(1)--------->YAB1                                                          <---------YAB1     <---------ATHB12     ---         ---------->DOF2              <---------ICU4      <---------ATHB12 --------->WOX13(1)  <-----   ttagttacacttaaagcttcaatagcttctactaataccaaaattgctctgaattagcctatcattcagctcagaaacaatcatatgtcctcacatgttc  11686500                                                                                    <---------ZAT18                                                                                    --------->LBD16                                                                         <----------ID1                                                                     <---------AHL20(2)                                                               <---------ANAC55(2) --------->ANAC55(2)      --------->ZAT6                                     <---------TOE2(3)         <---------ANAC55(2) ------>AtLEC2           ---------->DOF2        --------->TOE2(3)   --------->AHL20(2) --TEIL       <-----------GT1                  --------->YAB1  --------->ANAC55(2)<---------LBD16   <   atccaaaaacactattttacttacacttaaagcttccatagcgatagaatcatcaattttagattacgaattaaaacgagaaattgcgcaatcgaattga  11686600                                                                                <------NtERF2                                                                                --------->RAP2.3(1)                                                                               <---------DEAR4(2)                                                                               <---------ERF1                                                                               <---------ORA47(2)                                                                               <---------RAP2.3(1)                                                                               <---------ATERF1(1)                                                                              <---------RAP2.3(3)                                                                              <---------RAP2.3(2)                                                                              <---------ANAC46                                                                              <---------RRTF1(3)                                                                              --------->DEAR3(1)                                                                              <---------DEAR3(1)                                                                             <------NtERF2                                                                             --------->ATERF1(1)                                                              <------ZmHOX2a(1)------>NtERF2                                                            --------->ALFIN1 <---------ABI4(1)                                                           <------ZmHOX2a(1)<---------DEAR4(2)                                                         --------->ALFIN1   <---------RAP2.3(1)                                                        <------ZmHOX2a(1)   <---------ATERF1(1)                                                    <------NtERF2           <---------ORA47(2)                ------>MYB46(1)                  --------->At4g35610       <---------RAP2.3(2)     ------>MYB83                              <---------DEAR3(1)          <---------DEAR3(1)     ------>MYB46(1)             <---------ANAC58<---------At4g35610       <---------RAP2.3(3) -----------GT1 ------>MYB83     <---------ANAC58<---------LBD16 <------ZmHOX2a(1)            <------   ttttaccttccatagaccaacttcaaggccatatttcttggtaacttcttcggcggaaggaggaggaggagaagaagacggcggcgaaatgttcttatca  11686700                  --------->RAP2.6(3)                  --------->SPL7                ----------->HVH21                <---------SPL7               --------->ANAC58               --------->ANAC58              <---------LBD16                                                    <---------TOE1(3)      ------>NtERF2<---------DEAR3(1)           --------->ZAT2             <---------ARR14(2)      --------->LBD16                           <---------ZAT2             --------->ARR14(2)     --------->DEAR3(1)      <---------At4g35610<---------At4g35610   --------->GLK1(2)             -     <---------ALFIN1        --------->At4g35610--------->At4g35610  <---------ARR14(2)             -   <---------ATERF1(1)      ------->TEIL     <------ZmHOX2a(1)      <---------HSFC1(2)  <-----------RAV1(1)   ------>ZmHOX2a(1)  <---------ARR14(2)  <---------HSFB2a(2)       <---------HSFB2a(1)<---------ANAC46 ---YAB1<---------DAG2--------->ARR14(2)  --------->HSFB2a(2)  --------->ALFIN1  <---------TOE2(3)  -   atgtcctccgccttctcacggacggctctgcatctgaatttcttcgaggaagctgaaactgaagagtggaagaatcggatttgaaggtttctggtgttca  11686800                                                                           *TSS      --------->TOE2(3)                                                                           --------->ARR14(2)                                                                           --------->GLK1(2)                                                                           <---------ARR14(2)                                                                           <-----------ARR10                                                               --------->MYB52(1) <-----------GT1   <                                                        --------->AtMYB61  <---------ARR11(1)   <----                            --------->YAB1            ------>NtERF2        --------->ARR11(3)  <-----                          --------->ANAC58           --------->RAP2.6(2)   <---------ARR11(3) <------               <------ZmHOX2a(1)      --------------------->WRI1          <---------ARR14(1)<--------            <------ZmHOX2a(1)  <---------ICU4       --------->MYB46(3)    <---------CCA1(2)<---------AHL20(2) -------->ANAC58          --------->ANAC58         --------->At4g35610--------->ANAC58     <---------AHL20(1) -------->ANAC58      <---------HSFB2a(2)          <---------At4g35610--------->ANAC58   <---------YAB1 -------->ANAC46      --------->HSFB2a(2)         --------->ANAC46  ---------->DOF2  <---------DAG2<-   acaaggaagacgaaggaggaatttgcagaagcatcatcgccattgtttttttcagccaccaaaaaaaacagaaagcaaatcttttcaccttattattttt  11686900                         <---------AHL20(2)                    <---------YAB1                  -------->ATHB1                  --------->ATHB51                  --------->YAB1                  <---------AHL20(2)                  --------->AHL20(2)             ------------>CBF            --------->ANAC46 <------------CBF <---------ICU4                                --------->ARR14(2) ---------AHL20(2)<--------HAHB4                                <---------ARR14(2) -----AHL20(2)   <---------ATHB51                   ---------->ID1 ----YAB1   --------->ANAC58                      <---------MYB46(3)--------->LBD16 ---AHL20(2)--------->ANAC58 <---------AHL20(2)   <-----------RAV1(1)        <----------DOF2 -YAB1 ----------->HVH21<---------AHL20(2)    --------------->AGL15--------->HSFB2a(2)        ------- --------AHL20(2)--------->ICU4               <---------------AGL15<---------HSFB2a(2)        <------   atttattgtatgacacacaattattttttatttttttctgaaggtataccatttgttgtattagaggttccagagtaatcttttacatatataaaacttt  11687000                                             <---------AHL20(2)                               --------->ARR11(3)                               --------->AHL20(1)                               <---------ARR11(3)                               <---------AHL20(1)                                         <---------ANAC46                             <---------AHL20(1)                                           <---------ANAC58                             --------->AHL20(1)                      =============================RAV  ----------->GT1            --------->ARR11(3)              <----------ID1      <---------GLK1(2) -->TOE2(3)                  <---------ARR11(3) <---------YAB1       ----------->RAV1(1)  <---------ANAC58 ----DOF2                 >>>>>>>>>>GT-3b   --------->AHL20(2)    --------->ANAC46    <-----------RAV1(2)   aatatagtataaaaaatccataagtaagaaaaatatttttagactattttataaatataaaaaactacaaacaacatttgtttgattctcaggcgtttat  11687100                                                 <-----------GT1                                            --------->AHL20(2)                                            <---------AHL20(2)                                           --------->AHL20(1)                                           <---------AHL20(1)                                           --------->AHL20(2)                                        --------->AHL20(2)                  <---------YAB1                                        <---------AHL20(2)                <-----------GT1                                        --------->AHL20(1)                --------->YAB1                      >>>>>>>>>RAP2.2  <---------AHL20(2)             --------->AHL20(1)                    <---------ARR11(3) --------->AHL20(2)             <---------AHL20(2)                    --------->ARR11(3)<---------AHL20(1)              <---------AHL20(1)                   <---------CCA1(2) --------->YAB1                   --------->AHL20(2)         <---            <----------DOF2--------->YAB1  <---------AHL20(2)     <---------AHL20(2)        <--------   attttgaactgaaacttttgtatatctaaacatagtctaaaataatttattttacttatggattttgtataatttattacaattgtatataactaagaat  11687200                                                                                               ------                                                                                               ------                                                                                               ------                       --------->MYB52(1)                                                      <-----                      ------->GAMYB  <---------TOE1(3)                                         ------  <----------DOF2    --------->MYB46(3)            <---------YAB1                              ------ ------ARR11(3)      <---------MYB52(2)<------ZmHOX2a(1)                                      <------ -TOE2(3)         <----------ID1     <---------TOE2(3)        <-----------GT1                <-------   atcactttgcaatctctaatacaacaaacagcaaaacttaaggaaatggtggtattattcacatttactatatgtgaaatttgttgtctctattttcacg  11687300      <---------CCA1(2)    --------->YAB1                                                      --------->AHL20(2) --->ANAC58                                              <---------GLK1(2) --->ANAC55(2)                                         --------->AHL20(1) --->ANAC55(1)                                         --------->ARR11(3) ----ANAC55(2)                        <---------TOE2(3)<---------ARR11(3)                           < --->ANAC58           <-----------HVH21    <-----------GT1     <----------DOF2          --------->ANAC46 --->ANAC46          <----------DOF2---------->DOF2    <---------AHL20(1)         <---------ANAC46  < ---LBD16       ---------->DOF2    <---------YAB1  --------->LBD16     --------->YAB1  <---------ZAT18 ----GT1  <----------DOF2      <---------GLK1(2)  --------->ANAC46  --------->TOE2(3)  --------->ZAT18   gaactatcatctctttcccaaagctttcacccagattataaaggtttactatccgaaaatattctcttttccataaaaattttggtttgtacacaagttt  11687400  Previous    Next  AGI:  At2g27290.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO48682.1); contains InterPro domain Protein of unknown function DUF1279 (InterPro:IPR009688) Range:  from: 11685478    to: 11686875    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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