Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      --------->GLK1(1)                    --------->CCA1(2)                   --------->ARR11(3)       <------MYB83--------->ARR14(2)       <------MYB46(1)--------->ANAC58       <---------ANAC55(2)       --------->ANAC55(2)      --------->MYB59 --------->ANAC58      --------->MYB111(1)----------->RAV1(1)      --------->MYB46(2)<----------ID1 ----ZmHOX2a(1)    <---------ARR14(2) -----TOE1(3)      <---------ARR11(3)           <----------DOF2    ---------->DOF2              ----- -----TOE2(3)      --------->ARR11(1) --------->DAG2     <---------YAB1                       <------ --ARR10         ----------->ARR10   ---------->DOF2<---------AtLEC2      --------->ALFIN1    -------   ggaaatgttaggtatcaagaagatatgcaacaaaaacaaaaaagtataagctttgcattgctattgtcgaaaagaggtgggattgaatgtttgtatgatc  11678900                                              <---------TOE2(3)                <---------YAB1         --------->SPL7          <---------YAB1             <---------SPL7         <---------ANAC58            --------->TOE2(2)         <---------ANAC58            --------->TOE1(2) ->ZmHOX2a(2)  <---------AHL20(2)   <---------ANAC55(2)                <---------GLK1(2) ---ARR11(3)   <---------AHL20(1)  --------------->AtSPL8         ----------->RAV1(1) -->ARR11(3) <---------YAB1        <---------------AtSPL3      <-----------GT1   <------ZmHOX2a(1)   ttcatgttgatgcttattatttttgttcaccttcaactacgtacgaataagataagtttacaaatataccacagaattttagaggaatgagaaacatcaa  11679000                                  ----------->GT1     ------->TEIL                             --------->AHL20(2)     <---------WRKY18(1)                          ----                             --------->AHL20(1)   <----------DOF2                               <----                   <---------WOX13(1)       --------->HSFB2a(2)                                 -----           <---------ICU4    <---------AHL20(2)  <---------ANAC58                           ---------          <---------AHL20(2)--------->AHL20(2)   <---------ANAC58                    ----------->HVH21   gtttatagctaaataatgtcgattgatgaaattaattagttattttctagggcttgaacgtgacttctctcgactaatatcgctaatatgaccgtgaaga  11679100                                                                                                 ---- <---------AHL20(2)       <---------MYB46(3)                                              <---------TOE2(3) ----->CCA1(2)       <---------YAB1                ---------->DOF2                       <-----------GT1 -----ARR11(3)   --------->TOE1(3)            <----------ID1                          --------->TOE1(3) ---->ARR11(3)   --------->TOE2(3)         ---------->DOF2     <------ZmHOX2a(1)      --------->TOE2(3) >REM1(2)       ----------->GT1       <---------TOE2(3)      <---------TOE2(3)        <----------DOF2   tataaaaatgtttctatatcgttaatattggttattgtttaagaaaaaagaacaaaagaatataaggatgttttctatttctctattactttaacatttt  11679200                                                                                                 <---                                                                                            ---------                                                                                      --------->HSFB2a(2)                                                                                      <---------HSFB2a(2)                                                                                     ----------------                                                                                  --------->GLK1(1)                                                                                  <---------GLK1(1)                                                                                 --------->ARR11(3)                                                                                 <---------ARR11(3)        --------->ANAC46                      <----------DOF2                    --------->ARR14(2)   <-----------GT1   <-------TEIL          <---------ALFIN1<-----------GT1       <---------ARR14(2) ----->YAB1     --------->AHL20(2)  <----------DOF2      <----------DOF2 <---------ANAC46   ---------   catattttccacataaaaaaaaatacatttccagtttccttttcaacacttttgtttctctttaccattcttgtttcttagaagatttccaaaaccataa  11679300                                    <---------ICU4                                 --------->YAB1          --------->ANAC58                           <---------TOE2(2)             --------->ANAC46 --------->ARR14(2)        <---------TOE1(2)             --------->ANAC58 --------GT1               ------>MYB46(1)             --------->AtMYB61 ---------->DOF2 >TOE2(3)                --------->TOE1(2)       *TSS  ----------->RAV1(1)                     ------ ->AG------>ZmHOX2a(1)   --------->TOE2(2)   --------->YAB1         <-------TEIL---------->DOF2------ >TOE1(3)  <----------DOF2 ------>MYB83     <---------YAB1  ---------->DOF2  --------->TOE1(3) ------   aactatcctccctcttttctctataaacctacgtttcatagttactatgatcaaaaaccacacaaagaagtccattaaagcttaaagagaagaaaccacg  11679400                                                                                         >>>>>>>>>TBF1                                                                ------->GAMYB      ------>MYB83                                                              ------>MYB46(1)      ------>MYB46(1)        ---------->DOF2                   --------->ICU4      ------>MYB83        --------->MYB52(1)      >>>>>>>>>RAP2.2                   --------->MYB52(1)   --------->MYB52(1)  --------->TOE1(2)  -   --------->WOX13(1)                --------->ANAC58       --------->TOE1(2)   --------->MYB46(3)  - --->ANAC58                          --------->ANAC58      --------->DEAR3(2)   --------->DEAR3(2)<-- --->ANAC46                     <------ZmHOX2a(1)          --------->MYB46(3) ----------------------- --->ANAC58                    <----------ID1     >>>>>>>>>TBF1--------->MYB46(3)--------->TOE2(2)---   catagcaatctaaagtctaaacgatgcagaagaaggacgaagcaacgatgaagaagaatggaccaacgacgaagagggaagaaccaacgaagaagaagac  11679500                         <------NtERF2                        ------>NtERF2                        <-----------HVH21                       <---------bZIP60(1)                       <---------ANAC46                      --------->ATERF1(1)                      --------->RAP2.3(1)                      <------NtERF2                      --------->RRTF1(1)                     <---------RRTF1(1)                     <---------RAP2.6(1)                     <---------ATERF1(1)                     ------>NtERF2                     <---------DEAR4(2)                     <---------RAP2.3(1)                     <---------ERF1                     <---------ORA47(2)                    --------->DEAR3(1)                    <---------RAP2.3(2)                    <---------ANAC46                    <---------DEAR3(1)                    <---------RAP2.3(3)                   <---------ABI4(1)                   ------>NtERF2                   --------->ATERF1(1)                   <------NtERF2                  <---------ATERF1(1)                  --------->DEAR3(1)                 --------->ALFIN1                 --------->ATERF1(1)               <---------ANAC58               --------->ALFIN1    ---------->DOF2--------->RAP2.3(1) -------->ANAC58<---------LBD16                                       --------->ANAC58 -------->ANAC58------>NtERF2                                         --------->ANAC58    --------->YAB1 -------At4g35610<---------DEAR3(1)                            <---------MYB52(1)        <---------ATHB12 ->ANAC81      <---------ANAC58                         --------->ANAC58               --------->WOX13(1) ------>At4g35610<------NtERF2         <---------ANAC46 --------->ANAC58       ----------->GT1     <-   agaagccaaagaagaaggcgcggcggcgtcaaaacatagtcgcgttgtttattcagacaagtctcgttgtttaagcaaaaatggaaaaacaatcatctac  11679600                <---------AHL20(2)              <----------DOF2            <------NtERF2           ------>NtERF2          <---------DEAR3(1)         --------->ATERF1(1)         <---------At4g35610                                                                    -----         <------NtERF2                                                                         ------         <---------LBD16                                                                       <-----         --------->LBD16                                                                       <-----        --------->ANAC46                                                                      <------        <---------ATERF1(1)                                                   --------->ANAC46-------       <---------LBD16                                                  --------->GLK1(1)     -------    --------->ATERF1(1)                                             --------->LBD16           <------    ----------->HVH21                                              ------->GAMYB              -------   <---------SPL7                                                 --------->MYB46(3)          <------  <---------ANAC58                                               ------>MYB83<---------LBD16  <------  <---------ANAC58            --------->GLK1(2)                  -------->P <---------ALFIN1 <------ZmHOX2a(1)  <---------ANAC46        --------->YAB1                         ------>MYB46(1)  <-------TEIL<------ --------DEAR3(1)     <-----------GT1  <----------DOF2     --------->WOX13(1)--------->LBD16 ========   ttcggcgtgcccgcggctttaattttactcataatctgtgtctttgccttcaactacatagcaatccaaccgcgagttccacggttcatgctcgaggatc  11679700                                                                                                    < ->ZmHOX2a(2)                                                                                      -- --->GLK1(1)                                                                                     <--- ----GLK1(1)                                                                                    <---- -ZmHOX2a(2)                                                                                    ----- ---ARR14(3)                                                                                    <---- -->ARR11(3)                                                                                   <----- -->GLK1(2)                                                                                    <----- -----ARR10                                                                                    ------ -->ARR14(2)                                                         ----------->GT1           ------ ---ARR14(2)                                                   <-----------GT1                ------- ---AGP1------>ZmHOX2a(2)                                ---------->ID1                  --------->TOE1(3) ---ARR11(3)                                            <-----------GT1   ---------->DOF2--------->TOE2(3) ==============HOX2a_HOX2a     --------->YAB1      <----------DOF2 ---------->DOF2    <-----------GT1   tctacgttgatcccctctcaaacacaagtgtaattgtaagtgttttcaatttcctttttttcgttttacaaaagtataaagctattttaaaccctaatat  11679800  Previous    Next  AGI:  At2g27270.1    Description:  similar to hairpin-responsive protein, putative (HIN1) [Arabidopsis thaliana] (TAIR:AT5G06330.1); similar to Os02g0538700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047054.1); similar to hypothetical protein OsJ_006829 [Oryza sativa (japonica cultivar-group)] (GB:EAZ23346.1); similar to hypothetical protein OsI_007415 [Oryza sativa (indica cultivar-group)] (GB:EAY86182.1); contains InterPro domain Harpin-induced 1 (InterPro:IPR010847) Range:  from: 11679349    to: 11680286    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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