Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               ======================HOX2a_HOX2a              --------->TOE1(3)              <------ZmHOX2a(1)              --------->TOE2(3)          ------->GAMYB                                            <--           <-----------GT1            ----------->RAV1(1)        <-----------GT1            ---------        --------->YAB1                --------->MYB52(1)    <------ZmHOX2a(2)              <---------TOE2(3)  ------>ZmHOX2a(1)             --------->LBD16            <---------ARR11(3)             <---------- --------->TOE1(2)          --------->ARR14(2)             --------->ARR11(3)           <---------ATHB12 --------->TOE2(2)          <---------ARR14(2)    --------->AHL20(2)         --------->TOE2(3)    ---   aatccttcgattataaccttcacaaaatcaaatccgaaaacaacagaggaaattcaatagagatcatttaccagataaacatcagttccaattaacaata  11624100                                                                      <<<<<<<<<WRKY18                                                                 --------->ZAT2                                                                 ----------->RAV1(2)                            <---------WOX13(1)                   <---------At4g35610                      ------->TEIL                               --------->At4g35610                      --------->ARR14(2)                         ========================RAV                   <---------ANAC58                          --------->ANAC58                   <---------ANAC58                          --------->ANAC46                 -------                  --------------->AtSPL3                     --------->ANAC58            --------->LBD16                  --------------->AtSPL8              <---------TOE2(3)            <---------GLK1(1) -------ZAT6    <---------ARR14(2)                    ----------->ARR10            --------->GLK1(1)< >ZAT6      --------->HSFB2a(2)             --------->ARR14(2)  ------->TEIL --------->MYB52(1)     < -GT1       <---------HSFB2a(2)             <---------ARR14(2) <---------ALFIN1 ------->GAMYB <------ -------->GT1   --------->ARR14(2)  --------->YAB1    <---------TOE1(3)      ----------->RAV1(1)   --   gagtaagaacagttcgcgaattcgtacctgcttgataaacatagcgaaacctcgctaaggtactcgcacctgtcaaaatcaacagaaatcccagagatta  11624200   <-----------RAV1(2) <-----------HVH21                                                           ---------->DOF2 -->ICU4                                                                   --------->ANAC58 ------MYB83                                          ------>ZmHOX2a(1)    --------->ANAC58 ------MYB46(1)          --------->ATHB12    --------->YAB1      ---------->DOF2  ----------->GT1 ---YAB1               <---------WOX13(1)   <---------ATHB12   --------------->AGL15 ------->MYB59  --------->CCA1(2)         --------->WOX13(1)   <---------------AGL15   ttaggtcaggcgaagtagataagcgattgattagactcaaatagcaatcaaacctcctaattgaactcaaagtagaaacgaaagaggtgattacgaagtt  11624300                                                                                       <------MYB83                                                                                       <------MYB46(1)                                                                                      <---------TOE2(3)                                                                                      --------->MYB59                                                                                   <---------GLK1(2)                                                                                --------------->AGL15                                                                                <---------------AGL15                      ====================================HOX2a_HOX2a          <-----------------AGL1                      <------ZmHOX2a(2)                                        <-----------------AG                      --------->CCA1(2)                                        ----------------->AGL1                     --------->AGP1                                            ----------------->AGL2                  <---------WOX13(1)                                           <-----------------AGL2               <---------YAB1                                                  ----------------->AGL3             <----------DOF2                                                  --------->MYB52(1)            <---------ANAC58                           >>>>>>>>>TBF1          -------->P   <---------MYB46(3)            <---------ANAC58                       <------ZmHOX2a(1)         <-----------GT1   gaattctagggtttgctttgatagatccaagagaaaacgtagaagaagtaataggaagaagaagagactctacaaaaacttaccagattaggtttgttca  11624400                                                           <---------YAB1                                                          <---------AHL20(2)           --------->ZAT2                                 --------->AHL20(2)           <---------ZAT2                          --------->LBD16           <---------At4g35610                    --------->LBD16           --------->At4g35610                    ----------->GT1       <------ZmHOX2a(2)                         <---------LBD16      <---------ARR11(3)      ---------->DOF2   <---------LBD16                  <<<<<<<ZML2      --------->ARR11(3)    <------NtERF2    ----------->HVH21          --------->YAB1  ---------->DOF2      ------------------------>ANAC81   --------->AHL20(2)      <---------AGP1   cagagaaagatcgagctgagaaaaaatggaggcaaagtagaagaaaaatgaccgggaaattaaaattcagccaaaaataactagaactgaaaatgaaatg  11624500                                                                                                    <                                                                                                    <                                                                   <----------DOF2                 <-                                                           --------->ARR14(2)                      --                                                           <------------CBF              --------->AHL20(2)                                   --------->AHL20(2)      <---------ARR14(2)            <---------AHL20(2)                               ----------->GT1            <------ZmHOX2a(1) <------ZmHOX2a(2)--------                      --------->MYB52(1)                  =========================HOX2a_HOX2a   <---            *TSS     ----------->HVH21                    --------->ATHB12 <-----------HVH21<--------         <-----------GT1 ------->GAMYB                 <---------LBD16 <-----------------AGL1<-------   gtagtagctaataacattttggtctaacggagcaagataaaatagagtctgtgtatttcaggattgggtctttttccgatcaggcccatatttatttatt  11624600                                                       <---------ANAC58                                                    <--------P                                                   <-------GAMYB        ----------->GT1                            <---------ANAC58       <---------TOE2(3)                           <---------ANAC58 -----------------AG                              --------->MYB52(2) -----------------AGL1                   <---------TOE2(3) ----------GT1                         <---------AHL20(2) ------->MYB52(1)                   --------->YAB1<---------MYB46(3)                    <-------TEIL ->AHL20(2)                         <--------HAHB4--------->MYB55(2)            --------->ANAC58 ------AHL20(2)                    <---------AHL20(2)  <---------ANAC58         --------->ANAC58 -AHL20(2)                <---------TOE2(3)       <------MYB83                --------->MYB52(1) --AHL20(2)     <-----------HVH21  <---------YAB1 <------MYB46(1)          --------->ANAC46       <--   ttaacggatgaggtaaaatgtcagaacaaaggtttctataattaagttaagttggttgcttcactcttgaagtatataagaaacgaaacgttcaatctct  11624700                     ------>ZmHOX2a(2)                    <------ZmHOX2a(2)                   <-----------ARR10                   <---------ARR11(3)                   --------->ARR11(3)                   --------->AGP1           <---------AtLEC2                     <------ZmHOX2a(2)  <----------DOF2  <---------AGP1              --------->ARR11(3)    <-----------RAV1(1) --------DOF2  ---------->DOF2--------->YAB1   <---------ARR11(3)  <----------DOF2   ctttctttcatttgtatgaaagatctattctaatataacaaatatcgaagatcgaatgggaaatgaagtctttgttggacaaggtgaacttgtattagta  11624800                ----------->RAV1(1)              --------->At4g35610           --------->At4g35610                 --------->KAN4(2)           <---------At4g35610               <-------TEIL           --------->LBD16              <-----------RAV1(2)          --------->ANAC46            <-----------HVH21         <---------LBD16<-----------GT1<---------MYB52(1)      <---------At4g35610            --------->TGA2(1)                                --------->WOX13(1)      --------->At4g35610            --------->bZIP60(1)                            --------->WRKY18(1)  --------->ARR14(2)    --------->ZAT6<-----------TGA1                          <-------TEIL  <---------ARR14(2)   <---------YAB1<---------ETT(2)        <-----------GT1   --------->GLK1(2)<---- <---------GLK1(1)   <---------ICU4  --------->ETT(2)        --------->YAB1   --------->ARR14(2)----- --------->GLK1(1) --------->TOE2(3) <---------bZIP60(1) <---------AHL20(2)   <---------ARR14(2)=====   tggaaatccgctccgcagcaacattatcactagctcatgtcgtcaggctcattctccattttatcacaatacatatagaagattcagtcaatcggttacc  11624900                      <----------DOF2                      --------------->AGL15                <---------YAB1              <---------AHL20(2)              -------->ATHB1              -------->HAHB4              --------->ATHB12                                                               <-------              <---------ICU4                                                               ----------              --------->ATHB51      ---------->DOF2                            --------->ARR11(3)             --------->ICU4       --------->ANAC58                 <----------DOF2         --------->YAB1             <---------ATHB51     --------->ANAC58                 <---------DAG2 --------->TOE2(3)          <---------AHL20(2)    --------->MYB52(1)              --------->ANAC58 --------->ATHB12       ----------->GT1<---------------AGL15                     --------->ANAC58<---------YAB1 -----MYB59  <---------YAB1  <---------TOE2(3)        <---------YAB1           <---------ARR11(3) ---------->AGL15    <-----------------AGL3           --------->AHL20(2)      --------->CCA1(1) =====================================MADS_MADS       <---------AHL20(2)      --------->RVE1(1)   aaaattaagaagttaattattgttctttattaagaaacgaaagtactggttttgttttaattagacaagctttttgaaaaatatcattagaaattgtaat  11625000  Previous    Next  AGI:  At2g27170.1    Description:  TTN7 (TITAN7); ATP binding. similar to SMC2 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 2) [Arabidopsis thaliana] (TAIR:AT5G62410.1); similar to condensin complex component SMC3 [Physcomitrella patens subsp. patens] (GB:EDQ50619.1); similar to putative SMC3 protein [Oryza sativa (japonica cultivar-group)] (GB:BAD08001.1); similar to SMC3 protein [Oryza sativa] (GB:CAD59411.1); contains InterPro domain ABC transporter related; (InterPro:IPR003439); contains InterPro domain RecF/RecN/SMC protein, N-terminal; (InterPro:IPR003395); contains InterPro domain SMCs flexible hinge; (InterPro:IPR010935) Range:  from: 11616200    to: 11624512    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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