Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->AHL20(2)                     --------->AHL20(1)                     <---------AHL20(1)                <---------AHL20(1)                --------->AHL20(1)             <---------AHL20(2)             --------->YAB1                                                     --------->AHL20(2)             --------->AHL20(2)                                             --------->AHL20(2)            <---------YAB1                                           --------->At4g35610    <------ZmHOX2a(1)          <---------ICU4                                     --------------->AGL15       <------ZmHOX2a(1)         <---------YAB1                                      <---------------AGL15 ---------->DOF2         --------->ICU4 <---------AHL20(2)                   ========================================       --------->YAB1<---------AHL20(2)                --------->WOX13(1)   <---------AHL20(2)   gatgaataaacataattatatattatattatgttccaaactaatccatgagtagaatcaattactctaaacagatgaataaaataaaaagaggaggatta  11602000                                                                              <---------HSFC1(1)                                                                              --------->HSFC1(1)                           <---------DAG2                                     <---------HSFB2a(2)                           <----------DOF2                                    --------->HSFB2a(2)                         <---------At4g35610                            --------->ATHB51         --------------->AGL15                                          --------->AHL20(2)         <---------------AGL15                                          <--------ATHB1        ----------------->AGL3               --------->TOE1(3)          <---------AHL20(2)        ----------------->AG                 --------->TOE2(3)          <---------ICU4        ----------------->AGL1               <----------DOF2           --------->ICU4        ----------------->AGL2  <---------YAB1--------->DOF5.7(2)----------->GT1 =========================MADS_MADS <---------ICU4              <---------TOE2(3)            <-------   gttcattctagccatattcagtaattcagcttttctcattaagacaactttaactaaaatgctattgaagttaataatttcgagaaaaatccattttaca  11602100                          --------->ARR11(3)                          <---------ARR11(3)                 ----------->GT1                      ---------->DOF2                     --------->ALFIN1                      <---------ICU4                   --------->DAG2                      <---------ANAC46                  <---------AHL20(2)                  ---------->DOF2                 <-----------RAV1(1)                 --------->AHL20(2)              <---------TOE2(3)       --------->HSFB2a(2)               <---------ARR11(3)                <---------TOE1(3)       <---------HSFB2a(2)    ---------->DOF2--------->YAB1               ---------->DOF2         <---------LBD16   <---------At4g35610 ----GT1       --------->AHL20(1)            <----------DOF2 <---------ANAC46         --------->ALFIN1   aatagccaaagacagaatatataataaagacatttcttctaacttcactttaaagttaaagtggtgtttattcatcgggaaggaaactgtgtggctgata  11602200                                                                                         <-------TEIL                                                                                        --------->CCA1(2)                                                                                       <---------ARR14(2)                                                                                       --------->ARR14(2)                                                                          ------>ZmHOX2a(1)                                                                          <----------DOF2------------                                                                         --------->TOE2(3)                             --------->YAB1                     ----------->GT1  >>>>>>>>>GATA-1                             <---------ICU4                 <----------DOF2      >>>>>>>>>GATA-3                  <---------ANAC58                       <---------------AGL15   <---------ARR14(2)                  <---------ANAC58                       --------------->AGL15   --------->ARR14(2)               <----------DOF2 <---------YAB1           <-----------------AG     >>>>>>>>>GATA-4     ---------->DOF2        --------->ICU4              ----------------->AGL1   >>>>>>>>>GATA-2   gaattgcaaaagagtccctttcgtttttgaattatgactctaaattgtattctacaatgcctctttgggttaaatcctttgtggattcagatacaatgta  11602300                                                                                                  <--                                                                                          <---------AHL20(2)                                                                      *TSS                --------->AHL20(2)                                                                   <---------TOE2(3)     --------->AHL20(2)                                                                   <---------TOE1(3)  <---------AHL20(2)                   <---------TOE2(3)                              ---------->DOF2     --------->AHL20(2)             --------->ICU4             xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)           --------->AHL20(2)            <---------TOE2(3)          xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           --------->AHL20(1)    --------->TOE2(3)       ------------------------>ANAC81    <----------DOF2       <---------AHL20(1) >CBF       <---------TOE1(3)          xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)            <---------AHL20(2)   atctttcattagttaatgtttaagtttgaagttgagccaaaaaaaaaaaaaaaaaaaaaacttcactttaaagttaacttgtccaaataaaattaattcc  11602400                                        --------->YAB1                                        <-----------GT1                      --------->ORA47(1)                                   ------>ZmHOX2a(2)              -------->P ------>NtERF2                                  <------ZmHOX2a(2)               ------>MYB83                                 --------->ARR14(2)               ------>MYB46(1)                             <------ZmHOX2a(2)                   ----------->RAV1(1)                           <---------At4g35610                  --------->AtMYB61         ------>ZmHOX2a(1)                           --------->At4g35610                  --------->MYB46(3)     ------>ZmHOX2a(1)                  <---------ZAT14<---------ARR11(3)            --------->MYB46(3)     <---------ALFIN1                  --------->ZAT14<---------ARR14(2)         --------->MYB46(3)      ------>ZmHOX2a(1)                  <---------ZAT18--------->ARR11(3)  <---------GLK1(2)       <---------RAP2.6(3)                  --------->ZAT18<-----------ARR10   --------->ARR14(2)      <---------SPL7     -----               <---------ANAC58  --------->AGP1   <-----------RAV1(2)       --------->DEAR3(1) ------               <---------ANAC58  <---------AGP1 ----------->RAV1(1)<---------ALFIN1<---------ALFIN1 -------ALFIN1 <---------ANAC46 <---------CCA1(2) ===========================RAV ------>ZmHOX2a(1)   ccattccaaaaaacattgagtgcaatctcagatcagatctaatcacattccaccagatgctcaccaccaacactctcgccgtcctcctcctcctcttcct  11602500                                            <------NtERF2                                           ------>NtERF2                                           --------->ABI4(1)                                          --------->ATERF1(2)                                          --------->RAP2.3(3)                                          --------->RAP2.3(2)                                <---------ARR14(2)                              --------->LBD16--------->DEAR3(1)                            <---------LBD16--------->LBD16                            --------->At4g35610                            <------NtERF2 --------->DEAR3(1)                        --------->LBD16   <---------DEAR3(1)                        <-----------HVH21--------->DEAR4(2)                      <---------LBD16    --------->ERF1          --------->LBD16  ------>NtERF2 --------->ATERF1(1)         <---------ANAC46 <---------ALFIN1<---------ATERF1(2)        <---------LBD16--------->ANAC46  --------->RAP2.3(1)     <---------At4g35610<---------ATERF1(1)<---------ATERF1(1)        ------->GAMYB     --------->At4g35610------>NtERF2<-----------HVH21  --------->REM1(1)     --------->ZAT2 --------->DEAR3(1)   --------->ORA47(2)      <---------MYB52(1)     <---------ZAT2--------->At4g35610  <---------ATERF1(1)  <---------LBD16 ->ZmHOX2a(1)      <---------At4g35610 --------->DEAR3(1) <---------At4g35610                ------->TEIL --->TOE2(3)   <-----------HVH21--------->ARR14(2) ------->TEIL--------->LBD16<-----------ARR10   cagtctctgctccgggcagtcacctccggcaccggaacccatcgccgccgatggaccttcatctccggttaactgtctagtatctatgctaaacgtatca  11602600                                                               <---------ANAC58                                                               <---------ANAC58                                                              <---------ZAT2                                                              --------->ZAT2              <-------TEIL                       <---------ANAC58          <---------TOE2(2)                      <---------ANAC58  <---------ANAC46          --------->SPL7                         <---------ANAC46  <---------ANAC58          <---------TOE1(2)                  --------->At4g35610   <---------ANAC58        <---------SPL7                 ========================RAV<---------ZAT2       --------->TOE2(1)--------->ANAC58     <---------At4g35610  --------->ZAT2        --------->DEAR3(1)       --------->TOE1(1)--------->ANAC58     <---------ZAT2--------->LBD16     ---------->DOF2      --------------->AtSPL3           ----------->RAV1(2)--------->ANAC46<------MYB46(1)  <---------ANAC46      <---------------AtSPL3         --------->ANAC58    <---------LBD16  ----------->GT1--------->LBD16      <---------HSFB2a(2)         <------ZmHOX2a(2)<-----------RAV1(1)    <---------MYB46(3) --------      --------->HSFB2a(2)        --------->ARR11(3)<---------MYB46(3)     <------MYB83 <---------LBD16   <----------DOF2 --------->ALFIN1  --------->ANAC58   <---------ANAC46 <---------AtMYB61<------NtERF2   gactgcttctcgtacgttcaagtgggaagtaatgagatcaagcctgaagctgcttgttgcccggagcttgctgggatggttcaaagttcgccggagtgtg  11602700                  --------->ATERF1(1)                  <------NtERF2                 <---------ATERF1(1)                 <---------DEAR3(2)                 <---------ORA47(2)                 <---------RAP2.3(1)                 <---------RAP2.6(1)                 ------>NtERF2                 <---------RRTF1(1)                 <---------ERF1                 <---------DEAR4(2)                --------->ALFIN1                <---------RRTF1(3)                <---------RRTF1(2)                <---------RAP2.3(3)                <---------RAP2.3(2)                <---------ATERF1(2)                <---------DEAR3(1)                --------->DEAR3(1)                --------->ATERF1(2)               <------NtERF2------>NtERF2               --------->DEAR4(2)               --------->DREB2C(1)               --------->At4g35610               <---------ABI4(1)               --------->ATERF1(1)               --------->RAP2.3(1)               <---------At4g35610              <---------DEAR4(2)              <---------ERF1<------NtERF2              <---------RAP2.3(1)              <---------ORA47(2)              <---------RRTF1(1)              <---------RAP2.6(1)              <---------ATERF1(1)              ------>NtERF2--------->DEAR3(1)             <---------ATERF1(2)             <---------DEAR3(1)             --------->DEAR3(1)             <---------RAP2.3(2)             <---------RAP2.3(3)             <---------RRTF1(2)             <---------DREB2C(2)             <---------RRTF1(3)             <---------RAP2.6(2)            <---------ABI4(1)                                                                   <----            --------->ATERF1(1)                                                             ---------           <---------RAP2.3(1)                                                           ---------->DOF2          <---------RAP2.6(2)   <---------ANAC46                                       ----------->HVH21          <---------RAP2.3(2)<------NtERF2                                           <---------ANAC58          --------->ANAC46<---------LBD16                                            <---------ANAC58      <----------DOF2   --------->DEAR3(1)                 --------->ZAT2            <---------ANAC46     <---------ICU4 ------>NtERF2         <---------TOE1(3)<---------At4g35610     <---------ANAC46    --------->ICU4--------->RAP2.3(1)     <---------TOE2(3)--------->At4g35610    <---------AtMYB61 ->ALFIN1<---------At5g28300--------->LBD16                <---------ZAT2       <-----------RAV1(1)   tctgtaatctttacggcggcggcgcatcgccgcggtttggagttaagcttgataaacagagagctgagcaactttcaactatctgtggtgtgaaagctcc  11602800                                            <---------DAG2                                            <----------DOF2                                          ------>MYB83                                          ------>MYB46(1)                         <-----------------AG                   <-------TEIL  <------MYB83               <---------------AtSPL8   <---------MYB111(2)               <---------TOE1(3) <------MYB46(1)   ------>ZmHOX2a(1)     <-----------------AGL1                       <---------ARR14(2) -----ALFIN1   --------------->AtSPL3   <---------MYB111(1)           --------->ARR14(2)      <------ >At4g35610    <---------------AtSPL3--------->REM1(1)<---------AHL20(2)                 --------->MYB52(1)   atctcctagtttgtgttcaggtacatttactcatttggtacacctactttttctatgtaatttggactgtccgattcgattaaactcaatccaacggctt  11602900  Previous    Next  AGI:  At2g27130.1    Description:  protease inhibitor/seed storage/lipid transfer protein (LTP) family protein. Identical to Xylogen-like protein 11 precursor (XYP11) [Arabidopsis Thaliana] (GB:Q9ZVC7;GB:Q8L963); similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT3G43720.2); similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT3G43720.1); similar to Os01g0814100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044604.1); similar to Os05g0489200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055891.1); similar to hypothetical protein OsI_0197 Range:  from: 11602370    to: 11603620    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version