Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->ANAC58                     <---------At4g35610             --------->MYB52(1)                              --------->ANAC55(2)           <---------HSFB2a(1)                              ---------->ID1           <---------HSFC1(2)                           <----------DOF2   ----------------->AGL1           --------->HSFC1(2)     --------->YAB1        <---------DAG2 --------->GLK1(1)      --------->ANAC46      --------->ANAC58      --------->ANAC58    <---------GLK1(2)  <-----------HVH21  --------->At4g35610  <---------ANAC55(2)--------->YAB1 --->GT1   --------->MYB46(3)  --------->WOX13(1) --------->ANAC58 --------->YAB1   aaactttcacagaaccatcggatagatgacaaacaatcagaatcacataagaaggcaactttttcgtaatcggaatcccaaaatagggcgagagagaata  11578500                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                               ------                        <---------At4g35610  <---------WOX13(1)                               -------                        --------->At4g35610--------->ATHB12                               --------->TOE2(3)             ---------->DOF2        --------->ANAC46                                      --------->TOE1(3) <------ZmHOX2a(1)      --------->LBD16--------->MYB52(1)                           --------->YAB1 --   taaggagagcataaccaaagtcataccgcagacaaaacacaaaactgattgaacaaattaagaagttttcttagagtaatcgaaaatcaaaacctgaaaa  11578600                                    ----------->GT1                                   --------->DAG2                                 ---------->DOF2     ------->TEIL             <---------HSFB2a(2)  --------->ANAC58         <---------YAB1  --------->ANAC58        --------->AHL20(2) --------ZAT14          <---------RVE1(1)                                                       ----- ------->ZAT14         <---------ARR11(3)                                                       <---- --------ZAT18         --------->ARR11(3)                                                     ------- --->DAG2              <---------GLK1(2)                                                 --------->DAG2 --->DOF2             <---------RVE1(1)---------->DOF2                                 ---------->DOF2 ------->ZAT18 ---------->DOF2--------->HSFB2a(2)                                 --------->TOE1(2)   gtgcacgaatttgacaaaaaagagagatttttatagaaaggtaaagaaacccaaatgaaattggaccattagagtagaagaaaacctagaaaaggtgaga  11578700                                                                                          <------ZmHOX2a(2)                                                                                         <-----------ARR10                                                                                <---------ANAC46                                                                                <---------ANAC55(2)                                                 ---------->DOF2                --------->ANAC58                                               --------->TOE2(3)                --------->ANAC55(2)    --------->ANAC46                           <---------MYB59                  --------->ANAC58    --------->ANAC58                --------->MYB52(1)                       --------->ARR14(2)    --------->ANAC58               <---------ARR14(2)        ------>ZmHOX2a(1)--------->CCA1(2) ---->ARR11(3)                 ----------->GT1<---------ANAC55(2)     <----------DOF2   <------ZmHOX2a(1) -----ARR11(3)      --------->MYB52(1)  --------->At5g28300  ====================================HOX2a_HOX2a ---->ARR10         ----------->RAV1(1)----------->GT1       <----------DOF2 <---------ARR14(2)    --   tttttcacacaagtagaagaaacaacagtaagatggagaaacggtgatacctaaagagatgtcctttgagagctttggagttacgcgagaggatcaaacc  11578800                                                                --------->ALFIN1                                                              <---------ANAC46                                                            <---------bZIP60(2)                                                            <---------TGA1a                                                            <---------O2 --------->ZAT2                                                            <---------ANAC58                                                            <---------ANAC46        --------->At4g35610                                                          <-----------HVH21       <-----------RAV1(2)                                          <------ZmHOX2a(1) <---------ANAC58    --------->GLK1(2)                                    >>>>>>>>>TBF1    <---------ANAC46    <---------ZAT2                           <------ZmHOX2a(1)      <---------AtMYB61      --------->At4g35610 -------->DOF2          <-----------RAV1(2)       --------->ALFIN1       <---------At4g35610   caaaagaaaacaaaacgtcttcttctacaggagacgaagaagaaggagagaggtggtctgtgtcgtgtgtgagtcagcagcgaatcagatgggtagagag  11578900                                                                                 ---------->DOF2                                                                                <---------ATHB12                                                                            ------------>CBF                                                 <---------ANAC58          --------->ANAC58                                                 <---------ANAC46          --------->ANAC58         -                                             <------------CBF              --------->ANAC46    <-----                                 <------ZmHOX2a(1)                         --------->AtLEC2    <-----                                ----------->GT1  <---------ANAC58       ------>MYB83           <-----                   --------->GLK1(2)   --------->DAG2                   -------->P         <---------ANAC58                 <------ZmHOX2a(1)*TSS---------->DOF2   ------->TEIL    ------>MYB46(1)    <---------ANAC58   aagagagagagagagaagaggaatcttatgcgagaggagaaaaaggagattgtgtgtgtatgtgtgtgactaccaacatgcaataaagcatttgcttgct  11579000                                     <----------DOF2                                --------->At5g28300                                --------->DOF5.7(2)                                <----------DOF2                        <---------------AGL15                                  --------->REM1(1)                        --------------->AGL15                          <---------DAG2                       ----------------->AGL2                      --------->ARR14(2)                       <-----------------AGL1                     <---------MYB52(1) --------->DOF2        ----------------->AGL1                    --------->LBD16  <---------DAG2 ----ANAC58            ----------------->AGL3           <-----------GT1<----------DOF2 ----ANAC46   <---------ANAC46 ----------->GT1   <---------MYB52(1)<---------MYB52(1)             <-- ----ANAC58  <---------LBD16--------->MYB52(1)  <-------GAMYB  <---------LBD16 <---------ALFIN1 -----   tgtaaagacgattttgacggatgactccaaaaacggtaactttctcttgccgttgttatttctactccggttacttttcttacaccttttttttgtttgt  11579100                                                                                              -------                                                                                            ---------                  --------->ATHB12                                                          <--------                 <-------TEIL                                                           <-----------HVH21            <---------TOE2(3)                                                        <---------ANAC58      <---------AHL20(2)                ------>ZmHOX2a(1)                            <---------ANAC55(1)      --------->AHL20(2)               --------->TOE1(3)                             <---------ANAC55(2)  <---------AHL20(2)        <---------YAB1                       <----------DOF2     --------->ANAC55(2) --------DOF2 <------ZmHOX2a(1)        --------->TOE2(3)        <---------ANAC58     <---------ANAC58 ----->ID1  <---------TOE1(3)--------->YAB1                     <---------ANAC58   <-----------GT1   ctttttatttttttaaggattcattagtttatgataaacatccttaatctatggtcttagtcaattgctttacaaaacaattttgttacatgtcaactca  11579200                 <---------ICU4                 --------->YAB1                --------->ICU4               --------->YAB1 >GAMYB   <-----------GT1                  --------->AHL20(2) >At4g35610     <---------ATHB12       <---------YAB1 -At4g35610   --------->YAB1       <---------GLK1(2)         ------>ZmHOX2a(2)     --------->TOE2(3)   cattttagtattttactaataatcaaatccatagacagattatgaaaaaataatccatagtgatcccataaaaaatagaaactaatcttatcaaattgac  11579300                                                                       --------->ARR14(2)                                                                  ---------->DOF2                                                            --------->ATHB12                                                            -------->HAHB4                                                           --------->ICU4               --------->ATHB12                      <---------HSFC1(1)--------->GLK1(2)<---------YAB1               --------->ATHB51  <---------GLK1(2)   --------->HSFC1(1)<---------ARR14(2)          <-              <---------YAB1<-----------GT1          --------->HSFB2a(2)               <---------AHL20(2) <---------ARR11(3)  <---------ANAC58                <---------HSFB2a(2)--------->At4g35610        <- --------->ARR11(3)  <---------ANAC58               <---------LBD16   <---------GLK1(2)--------->AHL20(2)   agagatactaagacttattattggcttaatttacagaattgtttgaagaatttttctggaaatgatgggaaagaatctgactgaaatattaaaatagttt  11579400  Previous    Next  AGI:  At2g27090.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G39790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67364.1); contains InterPro domain Protein of unknown function DUF632 (InterPro:IPR006867); contains InterPro domain Protein of unknown function DUF630 (InterPro:IPR006868) Range:  from: 11574514    to: 11578934    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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