Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <----------DOF2             ---------->DOF2         ---------->DOF2                              --------->YAB1   --------->AHL20(2)             --------->AHL20(2)                           --------->WOX13(1) ---------ICU4              XXXXXXXXXXXXXXXXXXX>MIR157D       <---------MYB46(3) <---------ATHB12 ---DOF2----------->GT1   XXXXXXXXXXXXXXXXXXXX>MIR157A-C      ----------->GT1<---------YAB1   aaaaattacatagtataaagtatggtttgacaaaaaataaaaagaaactttacatatagcatattggttaaaacaaattatcaatcaaactatcgtttca  11566900                                                                 ------>ZmHOX2a(1)                                                                 --------->ICU4                                                                 <---------YAB1                                                             <---------ARR14(2)                        ------->GAMYB                  --------->GLK1(1)                      --------->At4g35610          --------->ANAC58                      <---------AHL20(2)                      <---------At4g35610          --------->ANAC46                     <---------AHL20(2)                  --------->TOE1(3)                --------->ANAC58  --------->AHL20(2) --------->AHL20(2)           <---------YAB1                        --------->MYB52(1) <---------YAB1  --------->ICU4    --------->YAB1--------->TOE2(3)   --------------->AtSPL8 --------->ARR14(2)--------->YAB1   atgtcatcaaaatatgaatacctcaactgaaaattgtagatgtgtacatgtaaacggaattcaaatcctgattatttagaagaataatttttaaatttca  11567000                  <---------AHL20(2)                  --------->AHL20(2)                --------->TOE2(3)                <----------DOF2             <---------ARR11(3)             --------->ARR11(3)                                                             ---------    <---------AHL20(1)                              --------->At4g35610                   --------->AHL20(2)    --------->ARR11(3)                              <---------At4g35610                   --------->AHL20(1)    --------->AHL20(1)    --------->HSFB2a(2)--------->AHL20(2)                          --------->YAB1   --------->AHL20(2)    <-----------GT1     <---------AHL20(2)                   --------->AtLEC2   acaaaatatatagaacatctttaaatttctcgattcaagttttgtttttaaatcagctagttgtttctccaaaatttgtatttcatgctaaaaataatag  11567100                                                                                                    -                                                           --------->ARR11(3)                       -                                                           <---------ARR11(3)                 -------                                                     --------->YAB1                         <--------                                                    <---------YAB1                          <--------     <---------ARR11(3)                           --------->YAB1                            <--------     --------->ARR11(3)                          <---------YAB1                             ---------     --------->GLK1(2)                      <---------AHL20(2)                        --------->ANAC58 --------->YAB1                            --------->AHL20(2)  <-----------GT1        --------->ANAC58 >YAB1 --------->TOE2(3)            --------->AHL20(2)   <---------TOE2(3)      <----------DOF2   <--   aaataaaaatctaaatgaaatcacaaacaaaaaatcaataacatattatatatgataataagattttacctctgtatttggacttttcaagcatgcgtga  11567200       --------->ANAC58       <---------TOE2(3)       --------->ANAC58   --------->ARR11(3) ----->MYB83 ----->MYB46(1)                                                     --------->ETT(2)               <- ---->HVH21                                                      <---------REM1(1)              ----- -ANAC58                                                       <-------GAMYB                 -------- -ANAC55(2)                        ----------->HVH21          <---------MYB46(3)            <-------- -ANAC58                         --------->YAB1              <---------AtMYB61      --------->ANAC58 >ANAC55(2)                  --------->MYB46(3)            <----------DOF2        ---------->DOF2---- -------MYB59      <---------YAB1<---------ICU4   --------->ANAC46  <---------ETT(2)--------->ANAC58   ccaaatatcaaggaaaacacgattatcgtccacaaccatgacattgattttcaagacagagctttggttgtagacagattgagcaaaagccattctaata  11567300                                                                                                    <                                                                                                    -                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                        --------->ANAC58                                                                                        --------->AtLEC2                                                                                        --------->ANAC46                                                                               --------->DAG2   <----                                                                              ---------->DOF2   -----                                                                              <---------ZAT14  ------     ---------->DOF2                         --------->MYB59        ---------->DOF2     --------->ANAC55(1) --------ICU4                                <---------TOE2(3)     <---------AHL20(2)   <---------ANAC55(2) ---->YAB1                                   <---------TOE1(3)   <-----------TBP        --------->ANAC58 ->YAB1                                   --------->CCA1(2)    ====================================== -YAB1                                   <---------ARR11(3)    --------------->AGL15 <---------REM1(2) ----->GLK1(2)   <-----------GT1         --------->ARR11(3) <-----------GT1----------------------->TaNAC69(2)   atctttgtaaagagttttttttctctctcaagtatgtatgaaagatttaggttgcacaaatttcactatttaaaggtgagtaaagtagacacgcaaatgc  11567400                                                                     --------->AHL20(2)          <------------CBF                                     <---------ICU4     ------------>CBF                                          --------->YAB1    ----------->GT1                                           <---------YAB1 ---------ARR11(3)                                            --------->ICU4          ----------->GT1 -------->ARR11(3)                                          <---------ICU4           --------->DAG2 ----------->AGL15                                          --------->YAB1   --------->ARR11(3) ------------AGL15                                         --------->ICU4    <---------ARR11(3) -------------AGL2                                         <---------YAB1   --------->YAB1 -------------AGL3 <---------------AtSPL8     <---------HSFB2a(2)<---------YAB1     ---------->DOF2 ------------>AGL2 --------------->AtSPL8     --------->HSFB2a(2)--------->ICU4   --------->YAB1 ------>CBF    <------------CBF           <-----------TBP--------->YAB1    <---------TOE2(3)       <- ============MADS_MADS           <---------AHL20(2)----------->GT1--------->YAB1 <---------YAB1  <---   aatatatggcaatattgtattgatgtactgtatatgtaaatgttatttgtagaaagaaataataataataataaactaagataatgaaaagttaattctc  11567500                 <------------CBF           -------->HAHB4                                                 <---------YAB1          ---           --------->YAB1                                            <---------ICU4               <--          <---------YAB1                                            <---------ARR11(3)            ---         <---------TOE2(3)                                          --------->AHL20(1)          <----        --------->YAB1                                              --------->AHL20(2)     <---------ANAC58      --------->AHL20(2)       ---------->DOF2                  --------->YAB1             <---------ANAC46      <---------AHL20(2)  ---------->DOF2                  <-------TEIL <-----------GT1    <---------ANAC55(1)     --------->YAB1----------->GT1                        --------->CCA1(2) <------------CBF  ------- ----------GT1 <---------AHL20(2)     ----------->GT1  <---------------AtSPL8xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) -------DOF2  --------->AHL20(2)--------->DAG2     ---------->DOF2  <---------AHL20(1)     <---------ANAC58   tttactattttaatgataaaattgaaaataaagaaaagttgagaaaaattagaaaaagagatacaaacaaaatattaccattgctcagaaatagcgtgtg  11567600              <---------ARR11(3)              --------->ARR11(3)              --------->GLK1(2)     ----------->GT1                                          <---------AHL20(2)    <---------TOE2(3)                                      <---------AHL20(1)  --------->AHL20(2)                                  <---------ATHB12  <---------AHL20(2)                  <---------AHL20(2)   --------->AHL20(2)                     --- ------------>AGL15                  --------->AHL20(2)    --------->AHL20(1)                     --- -------------AGL15                  --------->AHL20(1)   <---------AHL20(2)             <----------- ------>ICU4 --------->RVE1(1)       <---------AHL20(2)--------->YAB1                    ------------ -----At4g35610              ----------->GT1          --------->AHL20(2)               --------->YAB1 -->ZAT18  --------->AHL20(2)<---------TOE2(3)  <-----------GT1                  <<<<<<<<<<<<<<<<<LFY   ctaattaatgtaaaaaaatctagactaagttaagaaaaatttaatgctatttaccaataaatattttatatttaacaaaaaaaaaacaatggtagtacaa  11567700                                                                                                 ----                                                                                                -----         ------->TEIL                          <---------YAB1                                <-------  <---------YAB1                               <---------TOE2(3)               <-----------RAV1(1)  -  <---------AHL20(2)                           <---------TOE1(3)             <----------DOF2 <-------  --------->AHL20(2)                   <---------ANAC58                   <---------ARR11(3) -------- ------>AHL20(2)                    <----------DOF2              <---------GLK1(2)          <-------- ------>YAB1                     <-----------GT1                 --------->ARR11(3)         --------- ----AtSPL8           <-----------GT1  <---------ANAC58          <---------ARR11(3)   <---------GLK1(1) --->AtSPL8      <---------ZAT6<---------AHL20(2) <---------WOX13(1)      --------->ARR11(3)<--------   taatataaatgaatttctagtgtttctccatattttttctttcttgtttaagattgattttcatatagattttcaacatctttgttggatttgtgctata  11567800  Previous    Next  AGI:  At2g27070.1    Description:  ARR13 (ARABIDOPSIS RESPONSE REGULATOR 13); transcription factor/ two-component response regulator. Identical to Putative two-component response regulator ARR13 (ARR13) [Arabidopsis Thaliana] (GB:Q9ZVD3); similar to ARR21 (ARABIDOPSIS RESPONSE REGULATOR 21), transcription factor/ two-component response regulator [Arabidopsis thaliana] (TAIR:AT5G07210.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78184.1); contains InterPro domain Response regulator, plant B-type (InterPro:IPR017053); contains InterPro domain Response regulator receiver; (InterPro:IPR001789); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); cont Range:  from: 11562859    to: 11567293    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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