Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           <------ZmHOX2a(1)                                                                                     ---------->DOF2                                                                                  --------->AHL20(2)                                               ======================================================      <---------ARR11(3)                       <---------------AGL15            --------->TOE2(3) ------>GLK1(1)                              <---------At5g28300             <---------ALFIN1 ------>CCA1(2)                      <----------DOF2                         ----------->RAV1(1) ------ARR14(2)             <-----------GT1 <-----------GT1                --------->ANAC58 ----->ARR14(2)     <-----------GT1  <---------DAG2      <---------MYB46(3)--------->ANAC58<------ZmHOX2a(2)   atatgcaagttctctctatgtataactgtataactccctctttttgttactgtttctagtggtttcattcttaagacacccacattaaaaaggatcacca  11557700                                =======================HOX2a_HOX2a               ---------->DOF2  <------ZmHOX2a(1)     <---------------AGL15    <---------TOE2(3)     <---------YAB1         ---------->DOF2   --------->ARR14(2)     ==================================MADS_MADS------>ZmHOX2a(2)    <---------AHL20(1) ----------------->AGL3 <---------ARR14(2)                                   --    --------->AHL20(1) --------------->AGL15 <------ZmHOX2a(1)                                ------>ZmHOX2a(1)    <---------AHL20(2)--------->ANAC58    --------->YAB1                               <---------AHL20(2)   --------->AHL20(2) --------->ANAC58   --------->ICU4       <----------DOF2          --------->AHL20(2) ========================================MADS_MADS        <-----------GT1<-----------HVH21  <--------   atagattatatttatagcaaagacacccattaaaggatgactaatgaggatcgcctaatgttacctttagaaaaccatcagagacataataaaatcctta  11557800                                                                                                 <---                                                                                                 ----                                                                                               <-----                                                                                            <--------                                                                                       <---------AHL20(1)                                                                                       --------->AHL20(2)                                                                                       <---------AHL20(2)                                                                                  <---------AHL20(2)                                                                                  --------->AHL20(2) ------->ANAC46    <----------ID1   ------->TEIL                --------->TOE2(3) <---------AHL20(1) -ICU4         ---------->DOF2 <---------AtLEC2                 --------->YAB1<---------CCA1(2)<-----   cacatcaactagttcataaaagagacaaatttagcatgtactcttgtcaaatacagactgattcaatcttagtagttcccatattttattttattttaag  11557900                              ---------->DOF2                         --------->TOE2(3)                         --------------->AGL15                         <---------------AGL15                         --------->TOE1(3)                        ----------->RAV1(2)                        <---------ANAC55(2)                        ----------------->AGL1                      <-----------GT1                   <---------ICU4                   -------->ATHB1                   --------->ATHB51                                 ----------->HVH21       <--------                  --------->AHL20(1)                              <---------ZAT2          ------>MYB83                  --------->ICU4                --------------->AtSPL3                    ------>MYB46(1) <-----------GT1  <---------YAB1----------->GT1 <---------------AtSPL3      ---------->DOF2 <-------- ------ARR11(3)   --------->AHL20(2)       --------->YAB1         <---------At4g35610   <---------MYB46(2) ----->ARR11(3)   <---------AHL20(2)      <---------YAB1          --------->At4g35610   <---------MYB59 ----TOE1(3)   --------->AHL20(2)       <---------ICU4            --------->ZAT2        <---------MYB111(1) -AHL20(2)     <---------AHL20(2)       --------->YAB1   --------->AHL20(2)<---------AHL20(2) ----TOE2(3)  --------->AHL20(2)<----------ID1  <---------------AtSPL8     --------->AHL20(2)   atttaacctattcccataaaattattacctgaaaaagaaaaatcatcatagaagtacgaataaatgagagctgacaattaaagagcattacctacttttt  11558000                                               <---------ALFIN1                                            --------->ANAC58                                            --------->ANAC58                                            --------->ANAC46                                    <---------WOX13(1)                                  --------->ATHB12      ----------->GT1   ------>ZmHOX2a(1) --------->ATHB12     <---------ALFIN1   --------->AHL20(2) -DAG2               --------->YAB1<------------CBF   ----------->GT1      <-------TEIL --DOF2        ------>ZmHOX2a(1) <---------YAB1----------->RAV1(1)     <-------TEIL   ctgtcctcatctatctcctccattgattacgcttcttgattgaagcaccccacagagagagaaaaaaatagcatacatacattctctagttccttctctc  11558100                               --------->HSFB2a(2)                            <---------ARR14(2)                            --------->ARR14(2)                         --------->HSFB2a(1)                     --------->ANAC58                     --------->ANAC58                   *TSS  <---------HSFB2a(1)                  --------->LBD16                 --------->ANAC58         <----------DOF2                 --------->ANAC58    --------->ARR11(3)                <---------LBD16<---------HSFB2a(2)                --------->ANAC46     --------->GLK1(2)<----------DOF2             -------->P ------->TEIL --------->ARR14(2)    --------->ANAC58       <<<<<<<<<TBF1--------->SPL7   <---------ARR11(3)    --------->ANAC46          <----------DOF2<    <<<<<<<<<TBF1--------->ANAC46    <---------ARR14(2)    --------->ANAC58     <---------WRKY18(1) < <<<<<<<<<TBF1--------->ANAC46<---------LBD16     <---------CCA1(2)      ---------->DOF2            <   ttcttcttcttcttctaccccgcacgaacgtttctggagtatctcttttctcttatctttcactccattacagagcaaagcttgactctttaagttcaca  11558200                                                                  <---------YAB1                                                                -------->HAHB4                                                                --------->YAB1                                                                --------->ATHB12                                                                <---------ICU4                                                               --------->ICU4                                                               <---------YAB1         <---------TOE2(3)                                   <---------ICU4        ---------->DOF2                                      --------->YAB1 ---------ANAC58                      <---------HSFC1(2)    <---------ATHB51 ---------ANAC46        <-----------GT1 <----------DOF2     <---------ATHB12   --------->GLK1(2) ---------ANAC58   <----------DOF2    --------->HSFC1(2)    --------->ICU4  <---------TOE2(3)     <--   tggtgtgttttaaagttccttcttttttactcaatttcgaagctttgtgtctgttttatcaaataatgatgagaaattgagaatgtgggtttttgtgact  11558300                                                                                                   --                                                                                                   <-                                                                                                 ----                                                                                            <--------                                                                                   <---------ARR11(3)                                                                   <---------At4g35610    ------>ZmHOX2a(1)       <---------MYB52(1)                                         ----------->GT1  --------->ARR11(3) --------DOF2                                                  --------->AtLEC2   --------->YAB1<----   ctttgattcgttgtttagagaattgggttttgggattttgtgttgaattgctcagttttgaagtcatgcagataatatgttcgatgatattcctgttagt  11558400                                                                                      --------->ARR11(3)                                                                                   --------->DAG2        <---------YAB1                                                        --------->HSFC1(1) ------->ICU4                                   --------->At4g35610           <---------HSFC1(1) --------YAB1                  <----------DOF2  <---------At4g35610           <---------HSFB2a(2) ----->YAB1       <---------TOE2(3)      <----------DOF2                      --------->HSFB2a(2) -MYB52(1)        <---------TOE1(3)   --------->ARR11(3)             ----------->HVH21<---------ARR11(3) -----ZAT6       <-----------RAV1(2)  <---------ARR11(3)        <---------LBD16   ---------->DOF2   gatgatggtgatgaaagtttcaggtttttctgactttgaagctcttttggagcttaagaaaggttttcagggtgacccttctcgaaaagttcttacttca  11558500                                                                 <---------AtMYB61                                 <---------MYB52(1)              <---------DEAR3(1)                         <------MYB83               <---------ANAC58                    <---------YAB1                  <---------ANAC46--------->ALFIN1                    ----------->HVH21               <---------ANAC55(1)                  ------>ZmHOX2a(1)    <---------------AtSPL8 <---------ANAC46           <----------DOF2      <-------GAMYB       <---------ANAC58----------->GT1           <---------DAG2<------MYB46(1)   --------->SPL7    <---------LBD16           <---------AtLEC2      ---------->DOF2 <---------MYB52(1)   <---------LBD16   --------->At4g35610 --------->ATHB12   tgggatgctaaagctttatcctctgataggtgtccgttaaactggtacggagttacttgtagtagcggaggtgttacttctattgatttgaatggtttcg  11558600  Previous    Next  AGI:  At2g27060.1    Description:  ATP binding / protein serine/threonine kinase. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G10020.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67610.1); similar to hypothetical protein OsJ_010220 [Oryza sativa (japonica cultivar-group)] (GB:EAZ26737.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67361.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich Range:  from: 11558119    to: 11561853    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version