Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <----------DOF2 ------->HVH21                            <---------ARR11(3) --->TGA1a                                --------->ARR11(3) ----O2                               ----------->HVH21              <-----------ARR10 --->O2    <---------DAG2           ----------->GT1                  --------->ARR11(3) --->bZIP60(2)     ---------->DOF2 --------->DAG2                    <---------ARR11(3)         ----- ----TGA1a <----------DOF2       ---------->DOF2           --------->TOE2(3) <----------DOF2  -------   tgacagttcatagctttattcaaaagacaaacccagaaaggtgacatctttgaagcaaaaacctcatcaaaaatctcacctttaaaacaaaaaaacccac  11549000                          --------->ANAC58                                   --------->ANAC46                          --------->ANAC58                                --------->ZAT14                          ----------->GT1                                 <---------ZAT14   ---------->DOF2    --------->ANAC58                 --------->ZAT6---------->DOF2 ---->ANAC46          --------->ANAC46       <-----------GT1  --------->ARR11(3)   ------->MYC3 ---->RAV1(1)         --------->ANAC58      <-----------GT1   <---------ARR11(3)   <-------MYC3   aaaatcaaagtgaagaagctctataagcaagaaaaatccaaactttttaacacattaactctaaaatctacaaaagaacactgcatgtgaagtattcaag  11549100                                                                         --------->DAG2                                                                        ---------->DOF2           ---                                                                   --------->ANAC46               ---                                                                   --------->ANAC58               ---                          <---------LBD16                          --------->ANAC58           <------             ----------->GT1                                     --------->AtMYB61           --------          --------->GLK1(2) ----------->GT1                      ----------->RAV1(1)  --------->LBD16   cttgagagtaagaatttgtaaaaaaaaactcggaaaaaataggtttttgatatgaaaaacacagaaaccacacaaaaagtcacaaacccagagattaaag  11549200                                                                                   --------->ANAC58 ----------->RAV1(1)                                                               --------->ANAC58 ------>ANAC58                     ---------->DOF2                        --------->ZAT18 ------>ANAC58                  --------->At4g35610                       <---------ZAT18 ------>ANAC46            --------->TOE1(2)                               --------->ZAT14      <----- ---TOE2(3)               --------->TOE2(2)        <---------ZAT14    --------->DAG2           ------ -->DOF2            --------->ANAC46               --------->ZAT14   ---------->DOF2 <---------ARR11(3)   aagccacatttctaagaaatacacaaaacctatgagctaaagaacataaaccctacagtagaatcaaacaaaaaagcacactcacaagaccctaaaatca  11549300                                                                                                  <--                                                                                                 <---                                                                   <----------DOF2           <-------                                                               <----------DOF2               ========                                       --------->RAP2.6(2)    <------------------------ANAC81<-------  --------------------->WRI1           --------->ANAC46     <-----------GT1                 <--------  <----------DOF2          --------->ANAC58                <<<<<<<<<<GT-3b             <----------DOF2 ----ICU4                  --------->ANAC46              <---------YAB1                ============== --->YAB1                  --------->ANAC58         <------ZmHOX2a(1)     <-----------GT1   <--------   tcacctttgagtttatcgatgaaacaaaaacgaaaccctagccgaaacaagagaggattatttttctttctttttttttcaatttctctcttttgctttt  11549400                                                                                                    -                                                                                                    -                                   *TSS                                                             <                                 <------ZmHOX2a(1)                                                ---                         <---------ZAT2                                                          ----                         --------->TGA1a                                                         ----   <-----------GT1       --------->ZAT2                                           <---------MYB52(1)- -------AHL20(2)       ------>NtERF2                                        <----------DOF2     <---- ------AHL20(2)       ----------->HVH21                                 ---------->ID1          <---- --DAG2               <---------ETT(1)                               <---------HSFB2a(1)       ------ ==================================bZIP_DOF                        <---------GLK1(2)           ------ ---DOF2              --------->DEAR3(1)                           <---------ARR14(2)          ------ -ANAC58          --------->At4g35610                  --------->YAB1<---------HSFC1(2)        ------ ==================================bZIP_DOF   ----------->HVH21    --------->ARR14(2)      ------>ZmHOX2a(1) -ANAC58          <---------At4g35610     <---------ZAT14         <------ZmHOX2a(1)    --------------   ttattttactctcaaaatttagctccgacctgagaggaaaatggttcagtgacagtagcataaatcgaggattcttcgctttcagttatgttcctctacg  11549500         --------->YAB1        <---------YAB1    ------>NtERF2 -------->ANAC58 -------->O2 ---------O2 ------>MYB52(1) ------->HVH21                                     <---------WRKY18(1) ----->TGA2(2)                            --------->AHL20(2) -------->ANAC58                        <---------MYB52(1)                                    ------- -------HVH21                          <-------GAMYB                                       <---------YAB1 -------TGA1                           ----------->GT1                            --------->LBD16  -- --->ANAC46                           ----------->GT1                            --------->ANAC58  -- --->ANAC58                        <---------WRKY18(1)     <---------AHL20(2)    --------->ANAC58  <- --->bZIP60(2)                  <---------ICU4    --------->WRKY12              <---------LBD16<----- --->ANAC58                     --------->YAB1   <---------WOX13(1)           --------->PCF2 <------- --------->TaNAC69(2)      ------------>CBF    --------->ATHB12         <----------DOF2<---------GLK1(2)   tcacggctccatcatagtagagctactcttacaatcttgaccgttaaaatggttgacttatgttattgacttcgctttgtgtcccgctagattattttaa  11549600                                                                            ------->TEIL                                                                         --------->ANAC55(2)                                                                         --------->ANAC58                                                                        --------------->AtSPL3                                                                    ----------->HVH21                                                                   <---------WOX13(1)   <---------AHL20(2)                                            --------->ATHB12   --------->AHL20(2)                                           --------->AHL20(2) -->AHL20(2)           <---------MYB46(3)                       --------->ICU4       <---------MYB59 ------->AHL20(2)     <---------AtMYB61                         <---------AHL20(2)  --------->REM1(1) ------->AHL20(1)   <---------MYB46(3)                        <----------DOF2  --------->ANAC46 --------AHL20(2)  <---------ZAT6--------->HSFB2a(1)        --------->ZAT18 <-------TEIL ----AHL20(2)      --------->ALFIN1                       <---------ZAT18--------->ANAC58 --AHL20(2)        <---------AtMYB61                      --------->ZAT18<---------ANAC55(2)       <-   attttttaatttcaattggtagtggtggtagacaaaccttctgtgttctaatattgaatgtgcgcattaattgacacgtacatgctacataactatggat  11549700                            <---------YAB1                          --------->YAB1                          <---------ICU4                         <---------AHL20(2)                         <---------ATHB51                         --------->AHL20(2)                         --------->ICU4                      --------->AHL20(2)                      <---------AHL20(2)                     <---------YAB1                   --------->YAB1                  --------->ICU4                  <---------YAB1                <--------ATHB1                <--------HAHB4                <---------ICU4                --------->YAB1                --------->ATHB51               <---------ATHB51               --------->ICU4                       <-----------GT1               <---------ATHB12                   --------->AHL20(2)             --------->YAB1 --------->ICU4   <---------AHL20(2)            <---------YAB1-------->ATHB1    --------->AHL20(2)                 ------->TEIL --------->MYB46(3)--------->AHL20(2)     --------->AHL20(2)                   <-----------GT1  <XXXX ----------GT1 --------->AHL20(2)   --------->YAB1<---------AHL20(2) ------>ZmHOX2a(1)    --------->WOX13(1)   ttaacaactgtgttacaataattataaattattattaagcacaatataaaatttaaacagttttatgtctcctaaactatgtaacttattgtcaattagt  11549800                                                                                            ---------                                                                                         <---------ICU4                                                                                        --------->ICU4                                                                                       <---------AHL20(2)                                                                                      --------->YAB1                                                                                     <---------YAB1                                                                                   --------->YAB1                                                                                   --------->AHL20(2)                      <---------TOE1(3)                                       <---------RAP2.6(3)                      <---------TOE2(3)                                      --------->RAP2.6(2)              ------>ZmHOX2a(2)                                              --------->ANAC46              =========================HOX2a_HOX2a                           --------->RAP2.3(2)            <---------ARR11(3)                                               --------->ANAC58  <-----            --------->ARR11(3)                                   --------->DAG2   <---------ATHB51           --------->YAB1       ------>ZmHOX2a(1)    --------->ATHB12        --------->ANAC58  ------          <---------ATHB12    ------>ZmHOX2a(2)     --------->ICU4        --------->ANAC46  ---------     <----------DOF2  <---------YAB1                <---------YAB1----------->GT1 --------->ICU4    - XXXXXXXXXXXXXXXXXMIR840 <--------P              <---------YAB1---------->DOF2--------->LBD16 <------   ttatgtgcttcaatgatctcgtttatggttgatcctcactggaatccatttttgattattgactaaaaaggtatctaagccgcaattataaaaattataa  11549900  Previous    Next  AGI:  At2g27040.1    Description:  AGO4 (ARGONAUTE 4); nucleic acid binding. similar to PAZ domain-containing protein / piwi domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G21030.1); similar to AGO6 (ARGONAUTE 6), nucleic acid binding [Arabidopsis thaliana] (TAIR:AT2G32940.1); similar to PAZ domain-containing protein / piwi domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G21150.1); similar to AGO4-2 [Nicotiana benthamiana] (GB:ABC61505.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67397.1); similar to AGO4-1 [Nicotiana benthamiana] (GB:ABC61504.1); contains InterPro domain Argonaute and Dicer protein, PAZ (InterPro:IPR003100); contains Int Range:  from: 11543612    to: 11549435    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version