Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->YAB1                                                             <---------YAB1                                                        ----------->GT1  <---------At4g35610             --------->TOE1(2)     <---------ZAT6  --------->At4g35610            --------->ANAC58  <----------DOF2 ----------->RAV1(1)             --------->ANAC58 --------->TOE2(3)                           ------>ZmHOX2a(1) ---YAB1                         ----------->GT1-------->P --------->YAB1           <---------ARR11(3) >YAB1                 --------->YAB1        <---------MYB52(2)                     --------->ARR11(3)   tcgcagcacaagtttgagaatgcaaacacaatagaacgtaagaaaaaactaacctttagagttataatactggttctcaatgtcaacatcttgttcctct  11529300                   <---------ARR14(2)                   --------->ARR14(2)           --------->ARR14(2)                 --------->ANAC46                         ----------->GT1           --------->ZAT14             <---------At4g35610                             <---------ANAC55(2)           <---------ARR14(2)      <-----------HVH21                        --------->ZAT6       --------->YAB1             --------->bZIP60(2)                   --------->AHL20(2)   --------      --------->At4g35610        XXXXXXXXXXXXXXXXXXXX>MIR2112-3P        ---------->DOF2--------->ANAC55(2)   ------>ZmHOX2a(1)          ------>ZmHOX2a(1) --------->ANAC46   <---------ATHB12   <-------TEIL   tgctcctcatcagaatactcgaatccatagtcctccatgtcagcatctacacaaaaatcgaaaacccaaatcaataaaacactatcgattcgtaacaaag  11529400                  <----------DOF2                 --------->HSFB2a(1)                 <---------HSFB2a(1)                 <---------HSFC1(2)                 --------->HSFC1(2)            <---------HSFB2a(2)            --------->HSFB2a(2)                                                  --------->ANAC58           <---------LBD16                                                       --------->ANAC58        <---------ARR14(2)                                                  ----------->RAV1(2) -->DOF2--------->ARR14(2)     <---------GLK1(2)                           <---------ARR11(3)   taagtagtcgaattcgggaactttcgaaccctagattgtttcagagtagaagattagacatagcaaaacaagaacaagacctgaagccatgtcgattcga  11529500                   <---------ANAC58                   <---------ANAC46                   <---------ANAC55(2)                   <---------ANAC55(1)                   <---------O2                   <---------ANAC58            ------>MYB83            --------->MYB52(1)            ------>MYB46(1)           --------->MYB55(1)          --------->AtMYB61          <---------MYB46(2)          <---------MYB52(2)                                                                  -------          --------->MYB46(3)                                                       --------->LBD16          <---------MYB55(2)                                                      <---------HSFB2a(2)         --------->ANAC58                                 <---------ANAC58        --------->HSFB2a(2)         --------->ANAC58                  --------->ATHB12     <----------DOF2   <---------ANAC46  -         --------->ANAC46           ---------->DOF2       <---------ANAC58       <---------LBD16 ----  >>>>>>>>>TBF1   <-------TEIL   <------NtERF2      --------->GLK1(2) ---------->DOF2         >>>>>>>   tgaagaagaacaccaaacgatacgtggattagggcagagaaagaacgattagagaattttgcttctctttctcaaagggtttttgcggaagtagaagaag  11529600                                                 <---------GLK1(1)                                                <---------ARR14(2)                                                --------->ARR14(2)            <------MYB83 --------->YAB1                                            <---------ANAC58                  <------MYB46(1)                                            <---------ANAC58                 --------->MYB59                                            <---------ANAC46     <------------CBF          -------->HAHB4     >>>>>>>>>TBF1     --------->ALFIN1<-----------RAV1(1)     <---------YAB1--------->MYB46(2) ----------------->ANAC81              <---------MYB46(3)    <-----------GT1 --------->MYB111(1) ----------------------->ANAC81      xxxxxxxxxxxxxxxx>smallRNA(i)*TSS       <--------P    <---------YAB1 -------------------->ANAC81        --------->ARR11(3)    <---------ICU4 <------NtERF2  --------->YAB1 >>TBF1         >>>>>>>>>TBF1     ----------->ARR10----------->GT1   <XXXXXXXXXXXXXXXXXXXXXMIR472   aagagaagaagaagagaagaagaaggtggaagaagtaagatttgttgctggatttgtgaaatattactattgggccgagtaggtaagagataataatagt  11529700                                           <-----------TBP                                           <---------AHL20(2)                                           --------->AHL20(2)                                         --------->AHL20(2)                          --------->AHL20(2)                                         <---------AHL20(2)                       <----------DOF2                                         <-----------TBP                          --------->TOE2(3)                                       --------->AHL20(2)              <---------AHL20(1)                                       <-----------TBP                 --------->AHL20(1) <---------AHL20(1)                                       <---------AHL20(2)              --------->ARR11(3) <---------AHL20(2)                                     --------->AHL20(2)                <---------ARR11(3) --------->AHL20(2)                                     <-----------TBP                 <---------AHL20(1)   --------->AHL20(1)                                     <---------AHL20(2)              <---------ARR11(3)  <---------AHL20(2)                                   --------->AHL20(2)                --------->AHL20(1)  --------->AHL20(2)                <-----------TBP    <---------AHL20(2)            --------->YAB1   --------->TOE1(3)               ------->TEIL        <-----------TBP             ------->TEIL    <-----------GT1      --------->CCA1(2)      ----------->GT1                <---------YAB1--------->AHL20(2) <------ZmHOX2a(2)   <-------TEIL<-----------TBP      --------->AHL20(2)  <---------AHL20(2)  -------   ccgatcagatatatatgtatatatacatatacagtatatatatatatatatacacatataatatgaatcaaaatatttttttaactttaaaataaattat  11529800                                                <---------AHL20(2)                                  <---------AHL20(2)                                 <---------AHL20(2)                         <---------YAB1         --------->AHL20(2)                       <---------ICU4          --------->AHL20(2)                       -------->ATHB1       <---------ICU4                             --------->CCA1(2)                       --------->ATHB12     --------->YAB1                       <---------WOX13(1)                      --------->AHL20(2)    <--------HAHB4                     --------->ATHB12        ----------->GT1--------->ATHB51     --------->ATHB12                  <---------AHL20(2)     --------->CCA1(2)<---------ATHB51     <---------ATHB12                  <---------WOX13(1)    --------->ARR14(2)<---------AHL20(2)   --------->ICU4--------->ANAC58 <---------AHL20(2)       --    <---------ARR14(2)--------->ICU4     --------->WOX13(1)           --------->ICU4<---------TOE2(3) -->AHL20(2)   ---------->DOF2   --------->AHL20(2)      --------->ANAC58 <---------YAB1           <-   atcatggatatggtaaaaaaagaaattattagttataaatttgcaatcatttaatttttaagcaaaatagaaatttttaattgattgagatttgaagaaa  11529900                    --------->AHL20(2)                <---------AHL20(2)              <----------DOF2                --------->AHL20(2)             <---------DAG2               --------->AHL20(2)<---------TOE2(3)   --------------->AGL15         ----------->GT1 ----------->GT1     --------->ARR11(3)                              <------ZmHOX2a(1) ------->AHL20(2)   <---------AHL20(2)       <---------ARR11(3)       --------->YAB1  ---------->DOF2 --------AHL20(2)   --------->AHL20(1) <---------ZAT6<---------------AGL15      ---------->ID1   <---   tttatatggtatagataataaataaaatggaaattaagttagagatagaccttttcaaaattgagaacaaaatcagaaatttgtcttaaaaaggaggatt  11530000                                                                                 ---------->DOF2                                                                                <---------AHL20(2)                                                                              <---------YAB1                                                                           --------->AHL20(1)                                                                           <---------AHL20(2)                                        ------>MYB83                       --------->AHL20(2)                                        ------>MYB46(1)                   <---------AHL20(2)                                      <---------MYB59                     --------->AHL20(2)                                      --------->TOE2(3)                --------->YAB1                                --------->YAB1                         <---------AHL20(1)            --------->TOE2(3)  <---------YAB1                          --------->AHL20(2)     <---------YAB1          --------->YAB1                            <---------ICU4       ---------    --------->AHL20(2)       <---------ICU4                            <--------ATHB1       ---------    <---------AHL20(2)      --------->ICU4        <---------AHL20(2)   <---------AHL20(2) --------->CCA1(2) ------AHL20(2)         --------->AHL20(2)  <-----------GT1           --------->ICU4 ---------->DOF2   taaaattttaatagccttatatgatataaaataatgaaaacctaataaacattttataagttttttctcttaataattttattaaaagaaagataagaaa  11530100                                                                       <---------At4g35610                               --------->YAB1                          --------->ZAT2                               <---------ICU4         --------->At5g28300        ---------->DOF2                              --------->ICU4         ----------->GT1   --------->At4g35610 >ANAC58                 ----------->GT1--------->ANAC58              --------->GLK1(2)     <-------- >ANAC58              --------->GLK1(2) --------->ANAC58 ---------->DOF2       >>>>>>>>>RAP2.2   tttgaaaatgaattgctcacataaattctgtaaaaatgatgcaagaaaaaaaaaactgtaaaagaatagaagaagctgcaatctaaagtttgtggcgaag  11530200  Previous    Next  AGI:  At2g26990.1    Description:  FUS12 (FUSCA 12). Identical to COP9 signalosome complex subunit 2 (CSN2) [Arabidopsis Thaliana] (GB:Q8W207;GB:Q94A24;GB:Q9ZVD8); similar to ATS9 (19S PROTEOSOME SUBUNIT 9) [Arabidopsis thaliana] (TAIR:AT1G29150.1); similar to putative COP9 signalosome complex subunit 2 [Oryza sativa (japonica cultivar-group)] (GB:BAD81083.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18281.1); similar to unknown [Populus trichocarpa] (GB:ABK92472.1); contains InterPro domain PCI/PINT associated module (InterPro:IPR013143); contains InterPro domain Proteasome component region PCI (InterPro:IPR000717) Range:  from: 11526585    to: 11529665    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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