Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    <---------YAB1   <---------ANAC55(2)                   <-----------GT1   ----------->RAV1(1)   --------->ANAC55(2)            <---------ZAT6  <---------AHL20(2) ------------>AtSPL8              ----------->GT1 --------->AHL20(2) --TEIL  --------->AHL20(2)---------->DOF2  --------->TOE2(3)              <-----------GT1   atagtacataatcaaataacacatttatctaaagaagtgttaattacctcatataattgaacaacatttggatgttttatcaacttcatagtagctatct  11525000                                                                                              -------                                                                ---------->DOF2               <------                                               --------->MYB52(1)                            <-------                                       <------ZmHOX2a(2)     --------->RAP2.6(2)             <-------                                      <---------ARR11(3)     --------->ANAC58      --------->TOE2(3)                                      --------->ARR11(3)     --------->ANAC46   <---------ARR14(2)                                --------->ANAC58             --------->ANAC58   --------->ARR14(2)                                --------->ANAC58   ----------->GT1              --------->GLK1(2)----        ----------->GT1         --------->ANAC46 --------->MYB46(3)   ---------->DOF2    --------->AHL20(2)   ctcttctaatctgtaaaattcaacaaaaaaacacaagcaagatcaaaatcaaccgataaaaaaccgcaatgcgaaagcagagtatccataattcaataat  11525100                                 <----------DOF2                                --------->HSFB2a(1)                                <---------HSFC1(2)                                <---------HSFB2a(1)                                --------->HSFC1(2)                              <---------ARR11(3)                                                   -- -->YAB1                      --------->ARR11(3)              <-----------RAV1(2)                  <- ---ICU4                <---------ANAC58         --------->GLK1(2)--------->ARR14(2)         -------- --ATHB12               <---------ANAC58         --------->ARR11(3)                   --------->HSFB2a(2) --ATHB51             <---------YAB1            <---------GLK1(2)<---------GLK1(2)    <---------HSFB2a(2) ----->YAB1        <---------AHL20(2)  <----------DOF2      ----------->RAV1(1)    --------->GLK1(2)   aacaaaaacctgttcagccattttatgcttgagaactttctctttatcaagaatcttgagagcaacaggttctccagtttcagagtttctagcaaactta  11525200                                                -------->P                                                ------>MYB46(1)                            --------->ANAC58                                                ------>MYB83                               <---------ALFIN1        --------->HSFB2a(1)                   <---------MYB59                              --------->ANAC46        <---------HSFB2a(1)                   <---------MYB111(1)                          --------->ANAC58      --------->MYB52(1)                      <---------MYB46(2)                         --------->AtMYB61 ------->TOE2(3)                           <-----------GT1                               ------->GAMYB ---------DOF2             <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                            <---------ALFIN1 ->TOE2(3)            <---------ATHB12  <---------ICU4     <-----------GT1  <-------TEIL--------->MYB46(3)   actttagcaaacgttccttctccaattgttcttccaacttcatatttacctactctacgtttcacttgctgtctccgattcatttctctaaccacaccac  11525300                                                                 --------->ANAC58                                                                 --------->ANAC58                                                  <---------ARR14(2)                              <--                                          <----------DOF2 ----------->GT1                         ---                                    --------->ANAC58    <---------WOX13(1)         --------->ANAC58                                    --------->ANAC58  --------->ATHB12     ---------->DOF2       ----             ------>ZmHOX2a(1)    --------->MYB52(1) <---------YAB1     ----------->GT1--------->ANAC58       <-----------GT1          <---------MYB52(2)--------->ARR14(2)  --------->DAG2   --------->ANAC58       --------->ZAT6         ---------->DOF2    <------ZmHOX2a(1)  ---------->DOF2--------->ANAC58 -   aaacaaatatcactccttcagaaaacttagaacaaagaacgaaactttagaggatttgattggaaacaagaaaagggtaaagaagaagcaagacagagaa  11525400                            <-----------TBP                            --------->AHL20(2)                          --------->AHL20(2) --------->AHL20(1)                          <-----------TBP --------->AHL20(2)                        --------->AHL20(2)<-----------TBP                        <---------AHL20(2)<---------AHL20(2)                      <---------AHL20(2)<-----------TBP                      --------->AHL20(2)--------->AHL20(2)                      <-----------TBP <---------AHL20(2)                    <-----------TBP <-----------TBP                    <---------AHL20(2)<-----------TBP                    --------->AHL20(2)--------->AHL20(2)                  <---------AHL20(2)<---------AHL20(2)                <---------AHL20(2)--------->AHL20(2)              <---------AHL20(2)<-----------TBP              <-----------TBP <-----------TBP<---------AHL20(1)            <---------AHL20(2)--------->AHL20(2)              --------->ANAC58            <-----------TBP <---------AHL20(2)                ----------->GT1            --------->AHL20(2)<---------AHL20(2)             --------->DAG2          <-----------TBP <---------AHL20(2)<---------AHL20(2)--------->ANAC58 *TSS --------->TOE2(3) <-----------TBP <---------AHL20(2)  ---------->DOF2      --------->AHL20(2) ------------>CBF --------->AHL20(2)--------->AHL20(2)   --------->AHL20(2)      <---------AHL20(2) -------ARR11(3)--------->AHL20(2)<---------AHL20(2)     <---------AHL20(2)--------->TOE2(3)    ----- ------>ARR11(3)<-----------TBP --------->AHL20(2) <---------ANAC55(2)     --------->TOE1(3)  <------ZmHOX2a(2) ----->RVE1(1)--------->AHL20(2)<---------AHL20(2) --------->ANAC55(2)   ------->TEIL    <---------LBD16 -------->TOE2(3) <-----------TBP <-----------TBP<-----------GT1    ---------->DOF2  <-----------RAV1(1)   tatctcaatcttatatatatatatatatatatatatatatatatatatatattacttatttaaaaagcaaaaaagaaccttaattttttgttggggatca  11525500            <---------YAB1            ----------->HVH21           ------>ZmHOX2a(2)          <------ZmHOX2a(2)          --------->CCA1(2)         <---------AGP1         <---------ARR14(3)         --------->GLK1(2)         <---------ARR11(3)         --------->ARR11(3)         --------->ARR14(2)                                           --------->CCA1(2)         <---------ARR14(2)           ---------->DOF2       <----------DOF2              <---------YAB1         --------->ARR14(3)     <---------ANAC58           <---------ANAC58            <---------ANAC58       ----------->ARR10        <---------ANAC58           <---------ANAC58            <---------ANAC58 ------>RAV1(1)                 <---------ANAC46   <---------AHL20(2)<----------ID1    ----------->GT1   acataagagaagatctgatagctacagagagattgagtgagaaagagagagatttaaaatggcttttgagagagacgaagagacagaggtcgtgataaac  11525600                                <---------AHL20(1)                                --------->AHL20(2)                                <---------AHL20(2)                               <---------AHL20(2)                               --------->AHL20(2)                              <---------YAB1                            <---------ICU4                           --------->ICU4                                             ===============                   <---------AHL20(2)                                                 ===============                --------->ARR11(3)                                                    <------ZmHOX2a(1)                <---------ARR11(3)                                              <---------------AGL15          >>>>>>>>>TBF1    <---------YAB1                                       <----------DOF2  ----       >>>>>>>>>TBF1    <---------YAB1             <-------TEIL       <---------At5g28300        <---    >>>>>>>>>TBF1 --------->AHL20(2)   <-----------RAV1(1)           <-----------GT1<---------TOE2(3)   gatgaagaagaagaagaagatttattttgattattaaatttttgttggaaaaattcgtttttggtgagaagttacagttttgctttaaggagtttcagta  11525700           ------>ZmHOX2a(1)          --------->TOE1(3)          --------->TOE2(3)         ------>ZmHOX2a(2)        <------ZmHOX2a(2)       <---------ARR14(2)       <---------ARR11(3)       <---------GLK1(2)       --------->ARR11(3)       --------->ARR14(2)     ----------->ARR10            --------->AHL20(1)   ---------->DOF2                --------->AHL20(2) ===============HOX2a_HOX2a       <---------AHL20(2)                         --------->MYB46(3) ==============HOX2a_HOX2a       --------->AHL20(2) <----------DOF2        <-----------GT1          - ----->At4g35610        <----------ID1       <----------DOF2          <---------ANAC46xxxxxxxxxxxxxxx ------At4g35610    ---------->DOF2  <---------WOX13(1)          ----------->GT1     xxxxxxxxxxxxxxxx   gcagacaaagatccttagaacagaaagaaacaaaaattaattgctgtctttggtctttttttgagttttgtaacttgtaaccactaaaaaaaaaaaaaaa  11525800                                                                                            ---------                                                              <----------DOF2               <--------             <------------MYB.PH3(1)                       <-----------GT1     --------->AHL20(2)           --------->ARR14(2)                       ------>ZmHOX2a(2)          <---------AHL20(1)           --------->MYB52(1)                     <---------AGP1 <------------------------ANAC81  --------->DAG2                                  --------->ARR14(2)           <---------AHL20(2) --------->DOF2                                   <---------ARR14(2)      <---------AHL20(2)<-------- xxxxx>smallRNA(le3)                             <---------CCA1(2) <----------DOF2   <---------YAB1<- xxx>smallRNA(si3)                     ------->TEIL<------ZmHOX2a(2)    <----------DOF2    --------->AHL20(2)   aaaaaaggcacagtaaccgatttcaaagttttaagatgatgaactcaattcggatctgttttctcttttcttttcttttattttattttgatattaaatt  11525900  Previous    Next  AGI:  At2g26980.1    Description:  CIPK3 (CBL-INTERACTING PROTEIN KINASE 3); kinase/ protein kinase. similar to protein kinase family protein / NAF domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G21326.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67343.1); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 11522089    to: 11525401    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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