Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    ----------->HVH21                                                                                <---------MYB46(3)                                                                              <---------ANAC58                                                                      <---------HSFB2a(2)                                                                      --------------->AGL15                                                                      <---------------AGL15                                                                      --------->HSFC1(1)                    --------->ARR14(2)                                --------->HSFB2a(2)                    <---------ARR14(2)                ------>ZmHOX2a(1)       <---------ANAC58           --------------------->WRI1              ---------->ID1     <---------HSFC1(1) --------YAB1      <---------CCA1(2)          <---------MYB52(1) --------->HSFC1(2) -->ZmHOX2a(2)<---------MYB46(3)            --------->MYB52(2)   --------->HSFB2a(1)       ---------- --->ARR11(3)<---------YAB1                <-------TEIL          <---------HSFC1(2)     ------->TEIL ----ARR11(3)<---------TOE2(3)          <---------MYB46(3)       <---------HSFB2a(1) <---------MYB52(2)   cttgataacatttctatggttgtatccactatatgtctgtattggttcgttttgtccttgttttcgaattttctagaatgggttgtgacgaaccagtgaa  11519500                             <---------TOE2(2)                             <---------TOE2(3)                     <---------ANAC58                                       <------MYB83 <---------MYB59                     <---------ANAC46                         --------->YAB1<------MYB46(1)                     <---------ANAC58               --------->AHL20(2)     <---------TOE2(2) ->GT1    <---------WOX13(1) <---------TOE1(2)<-----------GT1<---------YAB1<---------TOE1(2)     <---   ttttagacctagattgatatgtttcttgtccaaggttttgagccaaatttacatttttatattttgataagtcttcgtaggtttgggtttgcctaatttc  11519600                                                                                     --------->ZAT6                                                                                --------->TOE2(3)                                                     --------->ATHB12           --------->TOE1(3)                                     ----------->ARR10 <---------WOX13(1)      --------->At4g35610<-- -------DOF2                     <---------LBD16    <---------YAB1        --------->YAB1  <----------   tttggtctatgtttagagttttgcaagtgatgaattggggagagttgcattttgttgattgaactgaacttgaaactcataagcttaacacaatgttgtt  11519700                  --------->ARR11(3)                  <---------ARR11(3)                 --------->RVE1(1)     <---------WOX13(1)                  <---------AHL20(2)            <---------DAG2   --------->ATHB12                  ----------->GT1                   <----------DOF2        ------- -------YAB1 --------->AHL20(2)  --------->ARR11(3)       --------->AHL20(2)               <---------ATHB12 -RAV1(1)  ----------->GT1    --------->YAB1              <---------AHL20(2)       <---------YAB1   gtcattgatttataagtaaatatcgtttagaagaataacttgttaaattccactacgaatataaatttcatcactttctcaaattatgttcaaatgatgt  11519800                                        --------------->AGL15                                 <------                                       ----------------->AGL3                                 -------                                       <---------YAB1                                        --------                                       ==============================================================                                     <-----------GT1                                         --------                                  --------->ALFIN1                                           <-------                                <---------ANAC46                                             <-------                       <---------------AGL15                                        ---------->DOF2                       ==============================================================================                       --------------->AGL15                                      <---------AHL20(2)                      ===============================================================================                      <-----------------AGL3--------->AHL20(2)                  <-----------TBP                      <-----------------AGL2<---------AHL20(2)              --------->ANAC55(2)               --------->AtMYB61<---------ANAC58   <---------YAB1           <---------ANAC55(2) ---->GT1     --------->ANAC46  <---------ANAC58 --------->YAB1    --------->MYB52(1)     <----------DOF2   aaatcgtttttcttccaccacaattctacaaatggtgtgttaccatttatatcatgaaaataagttgaataactgaataggtatttaaaaggctttctaa  11519900    <------------CBF  <---------YAB1 ---------AGL15 -------->AGL15 --------->AGL3 =========MADS_MADS --------->AGL2                        *TSS ----------AGL2                       --------->ANAC58    --------->TOE2(3) ----------AGL3            ---------->DOF2    <---------ANAC55(2) =========MADS_MADS    --------->ZAT14----------->GT1     ------->GAMYB            --------->YAB1 =========MADS_MADS    <---------ZAT14--------->ANAC58   --------->MYB46(3)       <---------YAB1   aattagtattgacttctacttgtactacacaaagtttgacaagtcaaaacgtgagtacaaccacaaacacatttaagagaccacatgataacaagaacat  11520000                                                                                       --------->MYB46(3)                                                                                      ------>NtERF2        <---------ANAC55(2)                                                       --------->ANAC46        --------->ANAC58                                    --------->YAB1        --------->ANAC58        --------->ANAC55(2)                                <---------YAB1  ----------->GT1        --------->ANAC46                   <---------AHL20(1)             <---------YAB1   <---------ICU4        --------->ANAC58                   <---------AHL20(2)          <------ZmHOX2a(2)   --------->YAB1   <---------ICU4                          --------->AHL20(2)   <---------AHL20(2)--------->ANAC58  -  --------->AHL20(2)            ---------->ID1      <---------GLK1(2) --------->ARR11(3)--------->AtMYB61   cacaataaatacgaaaccattttctctaagttttgtcccaaacaaaaaatttcagaaacttatcatataatggatcatggtaacatgccaccatcatcac  11520100                                                                                       --------->ZAT2                                                                                       <---------ZAT2                                                                          <---------ARR11(3)    -----                                                                          <---------ARR14(2)   ------                                                             ---------->DOF2           <---------At4g35610                                           <---------At4g35610       --------->ANAC46  ----------->RAV1(2)             <---------ATHB12       --------->ICU4       --------->LBD16  --------->ARR14(2)   <-----        --------->At5g28300         <---------YAB1       <---------LBD16  --------->ARR11(3)  <------NtERF2       --------->YAB1             <---------ICU4        <---------HSFB2a(2)           ------>NtERF2       ----------->GT1            --------->YAB1        --------->HSFB2a(2)           --------->LBD16  <---------YAB1                 <---------YAB1  <----------DOF2    <---------LBD16 <---------LBD16 --------->TOE2(3)              <---------ARR11(3)     <---------LBD16  ----------->ARR10     <------ -------->YAB1--------->YAB1    --------->ARR11(3)    ----------->RAV1(2)--------->GLK1(1)   <-------   catcatcaatggtaaatcataccaattccaacatgatcatgatgcatatgactttcttctggggaaagaacacggagatactcttctccggctggcccgg  11520200                                                                                                <----                                                                                                <----                                                                                             --------                                                                                            <-------PIF5                                                                                            ------->PIF5                                                                                           <---------bZIP60(2)                                                                                           <---------ANAC58                                                                                           <---------ANAC58                                                                                           <xxxxxxxxx                                                                                           --------->O2                                                                                           <---------TGA1a                                                                                           --------->TGA1a                                                                                           <---------O2 --------->ANAC58                                                                    <---------ANAC46 --------->ANAC58                                                                  ------>ZmHOX2a(1) ------>HVH21                                                                    <---------HSFB2a(1) --->LBD16    ------->TEIL                                      <---------ANAC58 <---------HSFC1(2) -NtERF2      <-------TEIL                       <-------GAMYB  <---------ANAC58 --------->HSFB2a(1) ---LBD16 <---------------AtSPL3           --------------------->WRI1            --------->HSFC1(2) --LBD16<------NtERF2                    ------>ZmHOX2a(1)      <---------ANAC46<------ZmHOX2a(2)   gacaagtctcggcatgtacgttctatgtctcatcgtcgtcttcctccttgctgttatcgtcgagtggcttgcccattcttcgatccttcgtggacgtggc  11520300          <------NtERF2        --------->ANAC58        --------->ANAC58                           --------->ANAC58                            ------        --------->ANAC46                  --------->ANAC58  <---------CCA1(2)             <---------DOF5.7(2)       ------>NtERF2                      --------->ANAC58<---------ANAC58     <---------MYB52(1)       --------->LBD16                <---------ALFIN1<---------ANAC58        <---------RAP2.6(3)      --------->DEAR3(1)             <---------REM1(2)<---------ANAC58  <---------ANAC58  --------->MYB52(1) -----TCP20                        --------->ZAT14 --------->ANAC58     <---------ANAC58--------->DOF5.7(2) -----TCP16(1)                --------->ZAT14 --------->ANAC58   <---------ANAC55(2)   <----------DOF2 ->ALFIN1------>NtERF2<-----------HVH21   --------->ANAC46<---------ANAC58    <-------GAMYB<---------At5g28300 xxxxxxxxxxxsmallRNA(se3)     <---------ZAT14 --------->ANAC58   --------->ANAC55(2)   ------>ZmHOX2a(1)   tccactagccgcgccaaggggctcgttcagaccgcagtctacacactcaagacaggccttgcttatctcgtgatgctcgccgttatgtcctttaacggtg  11520400  Previous    Next  AGI:  At2g26975.1    Description:  copper transporter, putative. similar to COPT2 (Copper transporter 2), copper ion transmembrane transporter [Arabidopsis thaliana] (TAIR:AT3G46900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21546.1); contains InterPro domain Ctr copper transporter; (InterPro:IPR007274) Range:  from: 11519939    to: 11520631    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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