Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      ---------->DOF2                                                   ---------->DOF2                                                <---------ANAC55(2)               <---------ZAT14                  <---------ANAC46                                   <-      <-----------GT1                           <---------ANAC58                                  <-- ----->ANAC58  --------->ZAT14         >>>>>>>>>RAP2.2     <------ZmHOX2a(1)                     ---- ----->ANAC58--------->ANAC46---------->DOF2    <---------ANAC58     --------->ANAC46         ------- ->MYB52(1)--------->ZAT6-------->P    --------->TOE2(3)<-----------RAV1(2)               ------->TEIL   ggcactattaacaacactaaactaatctaccaaaagtccaatctaaaatttcgtaaaggcaggagttttataagtcatcaagaacaagtatgaacatacc  11518600                                                   ----------->HVH21                                                 ===========================bZIP_DOF                                                 --------->O2                                    ----                                                 <---------TGA1a                                -----                                                 <---------O2                                 -------                              <---------ANAC46   --------->TGA1a                         --------->ZAT18                              <---------ANAC58   --------->ANAC55(2)           <---------------AGL15        --------->ANAC46   ================================MYC_MYB             --------------->AGL15 --------ATHB12            <--------P <-----------GT1       <-----------GT1   ----------------->AGL3 ---------HVH21          <---------MYB46(3)      ===========================bZIP_DOF --------->DAG2-- ----->ANAC46           --------->ALFIN1     --------->TOE2(3)              <-----------GT1   ------- -->MYB52(1)--------->WOX13(1)<---------ANAC58------>ZmHOX2a(1)  <----------DOF2    ---------->DOF2<-   agtcatttccaagtcaatccaaacaagtggttgcttgtaatctccatcctcaagtgacccatttacactttcttcttgtttccctataaagttcacaaga  11518700                --------->ARR14(2)         --------->MYB46(3)                                                               <---------WRKY18(1) ----->GLK1(2)  <---------ARR14(2)                                                   >>>>>>>>>>>>WRKY18 ---->YAB1  ------>MYB46(1)                                                   <---------YAB1 -->ANAC58  ------>MYB83                                                      <---------AHL20(2) ------->YAB1   --------->ARR11(3)                        <---------TOE2(3) <----------DOF2 -->ANAC58 ----------->RAV1(1)               ----------->GT1    ---------->DOF2  <---------WOX13(1) --------ICU4--------->MYB46(3)            --------->ICU4---------->DOF2    --------->TOE2(3)   atcattctcaaaccaacaaatcttgtagccacaagagacagtgccatgagtaaaaaaactaaagtttaaaggtcaatactttaattgactcttgacctct  11518800                        <---------AHL20(2)                     --------->AHL20(2)                     <---------AHL20(2)                     --------->AHL20(1)                     <---------AHL20(1)                     --------->ARR11(3)                     <---------ARR11(3)                                                         -----         <---------AHL20(2)                                 <---------ANAC46                    <----        <---------AHL20(2)                   <---------ARR11(3)                                <-----        --------->AHL20(2)                   --------->ARR11(3)                                ------       <---------WOX13(1)                    --------->GLK1(2)                           <-----------RAV1(2)   aaatcactgattaatttagtcaatatattatcaaattcagtctcaaaaatctaaacatggttttgtgttgtaatcaaatcggaagagggaaacaggggat  11518900                                                <------ZmHOX2a(1)           >>>>>>>>>TBF1                       ----------->HVH21        >>>>>>>>>TBF1                     --------->ANAC58                                    ------- ---->GLK1(1)   <<<<<<<<<<<<<<<<<LFY      --------->ANAC58                                  *TSS -----GLK1(1)   >>>>>>>>>>>>>>>>>LFY    ---------->DOF2                              <----------DOF2 ----ARR14(2)  --------->ANAC58    <---------DEAR3(1)                          <---------AHL20(2) --->ARR14(2)  --------->ANAC58   <---------At4g35610  ---------->DOF2    <XXXXXXXXXXXXXXXXXXXMIR156A-F   accagtggaagaagaagaagccattggagcatcttcatcggcgaaagccaggacagagaaagcgttggagagtttgttcatttttttctttcagtaagac  11519000                      ----------->GT1                  ---------->DOF2               <---------MYB59               --------->TOE1(3)               <---------------AGL15               --------->TOE2(3)               --------------->AGL15              ----------------->AG              ----------------->AGL3              ----------------->AGL1    ----------->HVH21         ----------->GT1                --------->WRKY12         <------MYB83 <----------ID1    --------->WRKY38(1)       --------->AHL20(2)         <------MYB46(1)                --------->WRKY45         --------->AHL20(2)         ---------      <------ZmHOX2a(1)               <----------DOF2  ------------------------>ANAC81    --------->TOE2(3) -->ZAT6--------->MYB59      --------->GLK1(2)      ---------->DOF2         --------->MYB52(1)   <---   taatcggaggaaggtaacctaaaagagaaaaaatcggtctctttgacccaaaaacaaagccaaacaaataaaaaaaaaaaacggcgaaataaacttaatt  11519100                          <-----------GT1                         <---------YAB1                       <---------ICU4                       --------->YAB1                      --------->ICU4                                      <---------ICU4                      <---------YAB1                                     <---------ATHB51                    --------->YAB1                                       --------->AHL20(2)                   --------->AHL20(2)                                    --------->ICU4                   <---------AHL20(2)                                    <---------AHL20(2)                   <---------YAB1                                      --------->YAB1                  --------->AHL20(1)                     --------------->AGL15                  --------->AHL20(2)                    ----------------->AG           <---------AHL20(2) >AHL20(2)        <---------AHL20(1)        ---------->DOF2          --------->AHL20(2)--------->AHL20(2) --------GT1   --------->AHL20(2)      ----------->GT1  ----------------->AGL1        --------->AHL20(2)   aacatgttttacttaaaaaatataattataactattttagtcagtaaaaagaacatataccatattggtcaaaaaataattagatagatttaattttgta  11519200                                     <---------ICU4                                     --------->ATHB51                                    --------->ICU4           --------->ZAT6             <---------MYB59                                    <---------YAB1<---------GLK1(1)                     --------->TOE2(3)                        ---------->DOF2 <---------ICU4   <---------MYB52(2)   --------->ATHB12           <-----------RAV1(1)    --------->YAB1  --------->GLK1(1)        <---------At4g35610   tagaaattgactaatgtcgcaattcgcaaagtaatctcataattgtgaccacatttccgactaacacttgagattacaactgatttgctaccttacaatc  11519300                                                                             <---------ARR11(3)                                                                             --------->ARR11(3)    <-                                                    <---------ANAC46        <---------CCA1(2)    ----                                                    ----------->GT1     --------->AHL20(2)     <-----      ----------->HVH21  --------->ZAT6   --------->ATHB12         <----------DOF2             ------ --------->MYB52(1)  <---------MYB52(2)<---------At4g35610         <---------DAG2  <---------CCA1(2)   ccataactgtgaccacatttgcgactaacacttgagattacaactgatttgatatcgtatattagaaaacttttttatatatcttgtatatttgtttgat  11519400                                                                                  ----------->HVH21                                                                                <---------MYB46(3)                                                                              <---------ANAC58                                                                      <---------------AGL15                                                                      --------->HSFB2a(2)                                                                      --------------->AGL15                                                                      --------->HSFC1(1)                    <---------ARR14(2)                                <---------HSFC1(1)                    --------->ARR14(2)                ------>ZmHOX2a(1)       <---------ANAC58           --------------------->WRI1              ---------->ID1     <---------HSFB2a(2) --------YAB1      <---------CCA1(2)          <---------MYB52(1) <---------HSFB2a(1) -->ZmHOX2a(2)<---------MYB46(3)            --------->MYB52(2)   --------->HSFB2a(1)       ---------- ----ARR11(3)<---------TOE2(3)             <-------TEIL          --------->HSFC1(2)     ------->TEIL --->ARR11(3)<---------YAB1             <---------MYB46(3)       <---------HSFC1(2)  <---------MYB52(2)   cttgataacatttctatggttgtatccactatatgtctgtattggttcgttttgtccttgttttcgaattttctagaatgggttgtgacgaaccagtgaa  11519500  Previous    Next  AGI:  At2g26970.1    Description:  exonuclease family protein. Identical to Oligoribonuclease [Arabidopsis Thaliana] (GB:Q9ZVE0;GB:Q8VZL2); similar to unnamed protein product [Vitis vinifera] (GB:CAO67339.1); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Exonuclease; (InterPro:IPR006055); contains InterPro domain Exonuclease, RNase T and DNA polymerase III (InterPro:IPR013520) Range:  from: 11516799    to: 11518992    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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