Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     --------->ANAC58                                                                <<<<<<<GRF7                                                              ----------->HVH21                                                            ===============================bZIP_DOF                                                            ----------->RAV1(2)                                                            <---------At4g35610                                                            --------->At4g35610                                                            =======================================MYC_MYB                                                            ========================================MYC_MYB                                                            =======================RAV                                                            --------->O2      --------->ZAT2                                                            <---------O2--------->ZAT2                                                            ==========================RAV                                                            <---------TGA1a--------->At4g35610                                                            <---------ANAC55(2)                                                       --------->ANAC58 --------->At4g35610 ------->GAMYB                                                       --------->ANAC58--------->ANAC46 --------->MYB46(3)                                                     <--------P<-----------HVH21      --------->ANAC58                                                  <---------TOE1(2)--------->ANAC58   --------->ANAC58                                                  <---------TOE2(2)--------->ANAC46   --------->ANAC46                                                 <-----------RAV1(2)   ----------->RAV1(1)-------->P                                            <---------ZAT14 --------->ANAC55(2) <----------DOF2          <---------ATHB12                  --------->ZAT14 --------->TGA1a<---------At4g35610 ---------->DOF2      <---------ICU4    <------ZmHOX2a(1) <-----------GT1 ----------->RAV1(1)    ---- ------>GT1--------->YAB1           ------>ZmHOX2a(1)=================MYC_MYB --------->At4g35610----   gtcaaaagctcaataatcttctcatactgactaagttccttaggagtactctcaggtaagtcacctgacacaccagcagcagctttgcaaacaaccctcc  11484600                               ------>ZmHOX2a(1)        <---------YAB1        --------->TOE2(3)                   <---------LBD16      <-----------GT1      --------->ARR14(2)                    ----------->RAV1(2)   <---------ICU4          <---------ARR14(2)               <---------YAB1     <---------ANAC46  --------->ICU4--------->YAB1--------->TOE1(3)           <-----------GT1      <---------ANAC58 -->ZmHOX2a(1) <---------AHL20(2)                      ------>MYB83            <---------ANAC58 ------->GT1  --------->AHL20(2)                       ------>MYB46(1)  <------ZmHOX2a(1)---------->DOF2   tgtaaaaattacaatttttaataaacccaaatccttaaacttgtttacacattcaccaaattacaatacctggaggaagttgcttcaagagcaaagacag  11484700                                                                                 --------->AHL20(1)                                                                                --------->AHL20(2)                       --------->TOE2(3)                           <---------ARR11(3)                    <---------ARR14(2)                             --------->GLK1(2)<---------YAB1                    --------->ARR14(2)                             --------->ARR11(3)                 <---------YAB1        <---------ZAT6              --------->ARR14(2)           <---------YAB1            --------->LBD16  <---------MYB52(2)    >>>>>>>>>>GT-3b         <-----------GT1------>ZmHOX2a(1)     --------->MYB52(1)   <---------ARR14(2)      <---------At4g35610   ggctaataggtttactattctgaatcctcaaacttatcccagagttactaacagaaactaacttgggaaaatctgaagaaaaatatatgattcagcaaat  11484800                                          <---------MYB59                      <---------O2                                          --------->TOE2(3)                    --------->O2                                          --------->TOE2(2)                 --------->TOE1(2)                                 <------ZmHOX2a(1)                         --------->DEAR3(2)                               <---------TOE2(3)                  --------->HSFB2a(2)                        ----------->GT1  <---------ANAC55(2)      <---------HSFB2a(2)                       <-----------------------TaNAC69(2)   <---------YAB1--------->PCF2       <-----        <---------GLK1(1)    ---------->DOF2--------->MYB52(1)  <---------REM1(1)   --------->ALFIN1   tgactcttagaaatctgaaaccagagaagtataaaggatagatacctaagtgagtttgagttctggttgtagaaggaacccacgaggtgttgattctgca  11484900                             --------->HSFB2a(2)                             <---------HSFC1(1)                             <---------HSFB2a(2)                            <---------LBD16                          --------->GLK1(2)                         --------->ARR11(3)                       ----------->ARR10                   <------MYB83                                          <---------MYB46(3)                   <------MYB46(1)                                       <------MYB46(1)                 <---------MYB52(1)                                  <-----------RAV1(1)               <---------MYB46(3)                                   --------->ARR11(3)              <               <-----------RAV1(1)     --------->ANAC58            <------ZmHOX2a(1)                -      <---------At4g35610<---------GLK1(2)                       <---------TOE2(3)               ---- ----AtLEC2  <---------At4g35610       --------->ANAC58---------->DOF2   <------MYB83          ------   ttgacttaatctgccatctgttggtaagattctggaaatggaagccatgttttgatcaaaagggttttaggatgttggtgaatcagagaagatgagttag  11485000                                                                                                    -                                                                                                   --                                             ---------->DOF2                                    -----                                         <---------ANAC46                                       <----                                       <---------ZAT14                                      <<<<<<<<<ARR2                                       --------->ZAT14                  ----------->RAV1(2) <<<<<<<<<ARR1                  <----------ID1    <---------ANAC46                    --------->At4g35610 <<<<<<<<<ARR1  --------->At4g35610               <---------ANAC58            <---------GLK1(2)        --------->MYB46(3) ---------bZIP60(1)   *TSS          <---------ANAC58         <---------ALFIN1      --------->YAB1  <- -------->bZIP60(1)   ---------->DOF2 --------->ALFIN1     =========================RAV ------------>CBF ------->HVH21   <------ZmHOX2a(1)<---------ZAT14          ----------->RAV1(1)  <----------DOF2------ --->MYB52(2) <------ZmHOX2a(1)<---------ANAC46      <------ZmHOX2a(1)  <---------At4g35610 <<<<<<<<<ARR2   tgacatctccaaatgaggaggagacaaagggttttgtggagtgttgtgaaagagaggagagccacacattcttcatctgcccctttcatcaacaatccta  11485100       <---------ARR11(3)       --------->ARR11(3)      --------->RVE1(1)                                                           <-----------TGA1      --------->CCA1(1)                                                          <---------bZIP60(1) ---------->GT1                                                                  <---------TGA2(1) ------->HSFB2a(2)                                   <---------ANAC58            --------->ETT(2) ---->ARR14(2)                                       <---------ANAC46            --------->bZIP60(1) -----ARR14(2)  <-----------------AGL3               --------->ALFIN1            <---------ETT(2) --------HSFB2a(2)          ------>ZmHOX2a(2)        <---------ANAC58         ------>ZmHOX2a(1) >ZmHOX2a(1)    <-----------------AGL2 --------->REM1(1)                  <-----------GT1   <--------   tctggaaaatatctacttaacatttttggatcgattctactacaactacgtcgatgtgtgtgtgtttttttttttttttcctgtcgtcatttccgatgtg  11485200                                                                                              <------                                                                                             <-------GAMYB                                                                                             --------                                                                                            ---------                                                                                        <---------SPL7                                                                                       <------MYB83                                                                              ------>ZmHOX2a(1)                                                                        <---------DAG2----------->ARR10                                  <---------MYB52(1)               --------->At5g28300<--------------                                 <-------GAMYB                     --------->DOF5.7(2)<--------------                                <------MYB46(1)                   ----------->GT1     --------->MYB46(2)                                <------MYB83                     ------>ZmHOX2a(2)    --------->MYB111(1)                         <---------ANAC46                        ====================HOX2a_HOX2a                         <---------ANAC58                       <------ZmHOX2a(2)     --------->MYB59                     --------->CCA1(2)                          =====================HOX2a_HOX2a                  <---------TOE2(3) <-----------GT1            <---------ARR14(2)     --------->MYB52(2)             ------>MYB83<---------ANAC58                      --------->ARR14(2)   <---------MYB52(1)             ------>MYB46(1)   --------->MYB59                 <---------MYB52(1) <---------MYB46(3)           <---------MYB59 <---------ZAT6                  --------->PCF5  ---------->ID1 <-------TEIL -MYB52(1) --------->TOE2(3)<---------ZAT14             --------->ALFIN1<----------DOF2<------MYB46(1)   ttttcgaacagaacctaattgagatttgagtgttcggttaaccagtcgattaatagaagtggtccgatcggtaacttttcctattggttaggtacggtta  11485300                                                              <---------AHL20(2)     --------->GLK1(2)                                       --------->AHL20(2) ---MYB52(1)                                          <---------ARR14(2) ->At5g28300                                          --------->ARR14(2) -->GT1                     <---------AHL20(2)       <---------CCA1(2) -AtSPL3             <-----------GT1               --------->YAB1                       <---------YAB1 -AtSPL8    <-----------GT1 --------->AHL20(2)    <---------ATHB12                  <----------DOF2   atcgaacaatcttttaaccattttttctaattttttaaactaatataaacaaatcatatccaattttataaactaataccaaaattctttaaaattgcta  11485400                                              --------->MYB52(1)                                             <---------ZAT14        --------->MYB52(1)                                     ------>MYB46(1)            <------ZmHOX2a(2)    <-------GAMYB              <---------AtLEC2       ------>MYB83              <---------ARR14(2)   ----------->GT1      ------>MYB46(1)                --------->MYB52(1)        --------->ARR14(2)   <------MYB83      ------>MYB83                 <---------MYB46(2)       --------->DEAR3(2)      <------MYB46(1) --------->ANAC46                  <---------MYB59         ------->TEIL            --------->MYB59   tacaaaccaaatttttgtatggatttgagacacattaccgaactgagttaactgataactgaaccgatccaaaccgaatttttgttcggttaaatttggc  11485500  Previous    Next  AGI:  At2g26900.1    Description:  bile acid:sodium symporter family protein. similar to bile acid:sodium symporter family protein [Arabidopsis thaliana] (TAIR:AT1G78560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65594.1); contains InterPro domain Bile acid:sodium symporter; (InterPro:IPR002657); contains InterPro domain Bile acid transporter; (InterPro:IPR004710) Range:  from: 11482030    to: 11485022    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version