Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->YAB1      --------->MYB52(1)                                                                            -      ----------->RAV1(1)                                                                           <   --------->ANAC46                                                                            <-----   --------->ANAC58                                                                            <-----   --------->ANAC58                                                                <------ZmHOX2a(1)< ---------->DOF2                   --------->YAB1                                --------->ANAC46   < -------->AtMYB61     --------->YAB1   ---------->DOF2                           --------->ANAC58   < >TOE2(3)    <---------YAB1      --------->AtLEC2      >>>>>>>>>>>>>>>>>LFY      --------->ANAC58   <   aaccaaagcaacagtatcatactatcagagaaaccatgcataaaagattgaagatggagccactgtaagaaaactacttacataaggaacccattctgcg  11480500       ------>ZmHOX2a(1) -------->ANAC55(2) ---------ANAC55(1) ----ANAC58 <---------REM1(1)     <---------ALFIN1                                            ------- ----ANAC58--------->ARR11(3)   ----------->RAV1(1)                           --------->ARR14(2) ---------ANAC58             --------->ANAC46                            --------->WRKY18(1)  <------ ---------ANAC58   =========================RAV                         <--------ZAP1      ------->TEIL ---------ANAC46   ----------->RAV1(2)                        <---------ARR14(2)         --------->ZAT14 ---------ANAC55(2)--------->At4g35610                        --------->ARR14(2)         <---------ZAT14   ttccgtctcctaagatgtagcacctgaaactcagccacaggtctaatttgattccatctaagccgatacaactcggtcaaaatactcgctctgcacctag  11480600                                                                  <---------ALFIN1                                                                 ------>MYB83                                                                 -------->P                                                                 ------>MYB46(1)                                                                ----------->RAV1(1)                                                               --------->MYB46(3)                                                               --------->AtMYB61                                                           --------->MYB46(3)                       <                         <----------DOF2            <---------ZAT14                          --------  --------->ARR11(3) <-----------GT1                --------->ZAT14         --------->ZAT14 ------>MYB83  <---------ARR11(3)<-----------GT1                 <---------ZAT18       --------->LBD16   ------>MYB46(1) -->HSFB2a(2)--------->TOE2(3)                    --------->At5g28300    <---------ANAC46   -------->P ---HSFB2a(2)--------->TOE1(3)                  --------->ZAT6--------->MYB46(3)   <---------CCA1(2)-   aagagaacttcatagccttaaatttccctttcccatccgttctaacattgacagtaaactcaccaccaacactctccgtgttctcatctcttccaaccag  11480700                                                                                    --------->ANAC58                                                                                    --------->ANAC58                                                                               --------->RAP2.3(1)                                                                              <---------At4g35610                                                                              --------->LBD16                                                                             --------->ANAC46      --                                                                          --------->ARR14(2)     <---              <---------ICU4                                              <---------ARR14(2)     ---- ---------->DOF2             --------->YAB1                       --------->YAB1--------->DEAR3(1)<-- ---------REM1(1)      <---------HSFB2a(2)                        ----------->GT1------>NtERF2   <--- ->MYB46(3)--------->YAB1   <---------YAB1                   <------ZmHOX2a(2)------>NtERF2      ---- -------->ALFIN1       --------->HSFB2a(2)   ------->GAMYB <------ZmHOX2a(1)<---------LBD16     <----   aggtgaagcaccatcaaaattacttccagtatcataagaattagtaacagcaagagtattaggatcaagcgtaacaattccgccgctcgaaatacaaagg  11480800                                                                                --------->MYB111(2)                                                                                --------->MYB55(2)                                                                                --------->MYB52(2)                                                                                <---------MYB46(3)                                                                               <--------P                                                                               <---------MYB55(1)                                                                              <---------MYB52(1)                                                                              <-------GAMYB                                                                            <---------DEAR3(1)                                                                          --------->ABI4(1)                                                                          ------>NtERF2                                                                         --------->DEAR3(1)                                                                         <---------ALFIN1                                                                        --------->DEAR4(2)                                                                        --------->ORA47(2)  ------->GAMYB          ------->GAMYB                                <---------LBD16  --------->MYB46(3) --------->ANAC58         --------->MYB46(3)                       <---------ARR14(2) --------->ZAT2        --------->ANAC46       <-----------GT1                            --------->ARR14(2) --------->ZAT14       --------->ANAC58    --------->YAB1                                <---------GLK1(2)  <---------ABI4(2)   --------->MYB52(1) ------>ZmHOX2a(1)                                <---------ARR11(3) <---------ZAT2   --------->ANAC58 ---->ZmHOX2a(2)                                ----------->ARR10    <---------ZAT14  --------->ANAC58 ------ARR14(2)                              <---------STY1(2)     --------->ANAC46<---------REM1(1)- ----->ARR14(2)                              --------->STY1(2)   <---------ALFIN1<-------GAMYB<------ ----ZmHOX2a(2)                             ------>MYB46(1)<---------ARR14(2)<---------DEAR3(2)     < ------ARR11(3)              <-----------GT1------>MYB83   --------->ARR14(2)<---------MYB46(3)------ ----->ARR11(3)        ------->TEIL       <---------MYB59--------->LBD16--------->DEAR3(2) --------->bZIP60(2) --ZmHOX2a(1)--------->AtMYB61        <---------ARR11(3) ------>NtERF2<---------ALFIN1--------->ANAC46   atcctcttataacgacctctccatgaatgtttaacaacaagatacctagctagatactccggctcttccacagcaccgccggttgttgaagcaacggcac  11480900                                  ------->GAMYB                   <------ZmHOX2a(1)                                 --------->ANAC58              --------->HSFB2a(2)                                 --------->ANAC58              <---------HSFB2a(2)                                 --------->ANAC46              <---------LBD16      --------->ANAC58         --------->MYB52(1)             <---------ANAC46      --------->ANAC58      <------ZmHOX2a(2)       <---------ANAC55(1)      <---------ANAC55(2)  --------->AGP1           <---------ANAC58      --------->ANAC55(2)  <---------ARR14(2)       --------->ANAC55(2)                            -- -------->HSFB2a(2)        --------->ARR14(2)       <---------ANAC55(2)                           --- ---ALFIN1                --------->At4g35610       <---------ANAC46                              <-- ---------HSFB2a(2)    <------ZmHOX2a(2)            <---------ANAC58 <------ZmHOX2a(1)<---------ANAC46 >NtERF2              <-----------HVH21----------->GT1--------->ALFIN1 <---------YAB1 ----------->GT1   ctctagagacggaatccatagtccgatcagatccaacggaatcgataaactgtaacgtgttgtttcgaggaggattattaagaagaggtcgtagaaaatc  11481000                <---------HSFB2a(1)         --------->ALFIN1                --------->ICU4             <---------AtMYB61                --------->KAN4(1)       <---------DEAR3(1)           --------->LBD16              <---------ANAC58          <---------LBD16       <------ZmHOX2a(1)       ------>MYB83          <-----------RAV1(2)       -------->P         --------->ANAC46 <---------DEAR3(1)       ------>MYB46(1)    --------->ANAC58 --------->ALFIN1                                     -----      ------>ZmHOX2a(1)   --------->ANAC58<------NtERF2                                        ------      =====================HOX2a_HOX2a  <---------ANAC46          <---------ARR11(3)          <------  --------->GLK1(2)     ---------->DOF2 <---------ANAC58    --------->DEAR3(1)                <------NtERF2  --------->ARR14(2)   --------->ARR14(2) --------->ATERF1(1)------>NtERF2<---------ANAC58   --------  <---------ARR14(2)   <---------ARR14(2)--------->LBD16    --------->RAP2.3(3)          --------->ANAC46 <---------GLK1(2)  ===================HOX2a_HOX2a   --------->ATHB12<----------DOF2     --------->ANAC58 ------->LBD16 <---------KAN4(2)--------->YAB1--------->ALFIN1<------NtERF2              --------->ANAC58 ------>HSFB2a(2)   ------>ZmHOX2a(2)  <---------LBD16<---------GLK1(2)   <---------ANAC58   ------>NtERF2 -------HSFB2a(2)--------->ATHB12  <---------ICU4<---------PCF2<---------ALFIN1        ---------->DOF2   ccagaatcctaccctggaatgatcggaaacgccaggataatggcgggggtgggactgattcgcccccagttctttgacttggttatagcaaaagccaccg  11481100                             <---------------AGL15                             --------------->AGL15                            ------>ZmHOX2a(2)                            ----------------->AG                     --------->MYB52(1)                   <---------MYB52(2)                   --------->MYB46(3)    --------->TOE1(3)                  ------------>CBF      --------->At4g35610           ------>ZmHOX2a(1)----------------->AGL1       --------->ARR11(3)   <-----------------AGL3       <---------ARR11(3)   ----------------->AGL3      <---------HSFB2a(1)   ----------------->AGL2                           --------->HSFB2a(2)      <---------HSFC1(2)   <-----------------AGL1                            <---------HSFB2a(2)      --------->HSFB2a(1)  <------ZmHOX2a(2)                                <---------LBD16      --------->HSFC1(2)  --------->ARR14(2)                               <---------LBD16 ---->LBD16========================HOX2a_HOX2a                 <---------TOE2(2) --->DEAR3(1)    ----------->RAV1(1)    <---------At4g35610    <---------TOE1(2)                <---- ---LBD16  <----------DOF2<---------ARR14(2)    --------->TOE1(3)   --------->ANAC58      ------->TEIL ->MYB52(1)=======================HOX2a_HOX2a   --------->TOE2(3)   --------->ANAC58   <---------YAB1   gggctagaaggtccttttgcaacaatcggatccaaaatgggaagcttaaaccctaattttagtcgtatgtaagaaacctcggggagaagatgaatgcgat  11481200                             --------->YAB1                            --------->ICU4                      <------MYB83                                                                  <                      <------MYB46(1)                                                              <-                   >>>>>>>>>SARD1                                                                <---                   >>>>>>>>>CBP60g                                                               <---              --------->ANAC58  --------->YAB1                                         <---------ANAC46              --------->ANAC58 <---------YAB1                    ------>ZmHOX2a(2)     <---------ANAC58              --------->ANAC46 --------->ICU4              <-----------GT1             ----------->GT1              --------->ANAC55(2) --------->ICU4        --------->ARR14(2)             <---------ANAC58 --ZmHOX2a(2) <---------ANAC55(2) <---------YAB1        <---------ARR14(2)      ---------->DOF2  <---   cgatttgttcttgaatacgaaatttggtgaatgatgatgatcagagggaaatgaagcaaattttcgatctgagattgggagagaaagagtcgtgaatttg  11481300        <---------REM1(1)        <---------MYB46(3)        <-----------RAV1(1)  <---------MYB46(3)          ----------->HVH21 -------GAMYB           <---------At5g28300                 --------->MYB52(1) ----------RAV1(1)     <-----------GT1                      ---------->DOF2   <---------ANAC58 ------ANAC58   <---------MYB52(1)                <-------GAMYB               <---------ANAC58      - ------ANAC58  <-------GAMYB--------->ALFIN1     ----------->GT1        <---------YAB1   --------->LBD16 ------ANAC46 <-----------RAV1(1)    <----------DOF2 ---------->DOF2--------->ICU4     <---------LBD16   tgtgttgttgttgttgctgttgtttttacagtgtgacgactttgtttgagagggttaaaggctaaaggccatttttgattcggtgtctctccggtgcaaa  11481400  Previous    Next  AGI:  At2g26890.1    Description:  GRV2 (KATAMARI2); binding / heat shock protein binding. similar to hypothetical protein OsJ_031280 [Oryza sativa (japonica cultivar-group)] (GB:EAZ17071.1); similar to DNAJ heat shock N-terminal domain-containing protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG66288.1); similar to hypothetical protein OsI_033579 [Oryza sativa (indica cultivar-group)] (GB:EAY79620.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623); contains InterPro domain GYF (InterPro:IPR003169); contains InterPro domain Molecular chaperone, he Range:  from: 11469145    to: 11480919    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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