Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <---------ANAC58                     --------->AHL20(1)                                                     <---------ANAC58                    --------->AHL20(2)                                                <---------ICU4           <---------ATHB12--------->YAB1                                                --------->ATHB51      ===============================                                   --------->AHL20(2)<---------AtLEC2 <---------------AGL15                               --------->ICU4   --------->ATHB12   <-----------GT1    --------->YAB1                       <---------GLK1(2)       <---------YAB1  --------->AHL20(2)   --------->AHL20(2)                       --------->ARR14(2)      --------->ICU4 --------->AHL20(2)    --------->AHL20(1)                       <---------ARR14(2) <----------DOF2     <---------AHL20(2)   --------->YAB1          --------->YAB1    <-----------GT1  --------->YAB1 --------->YAB1   ----------->GT1 -------DOF2      --------->MYB52(1) <-----------GT1 <---------ANAC46----------------->AGL1   tttgtttttctagcattatgcaacggatttttactgattaaacactttcataattgcatgaaaaataattttccaatcgaagtaaaaataataatattac  11462500                                                                                                    <                                --------->ARR14(2)             <---------GLK1(1)     ----------->GT1-             <-------TEIL    ========================================================MADS_MADS-------     <-----------GT1         <---------------AGL15 <----------DOF2   --------------->AGL15    <------   <-------TEIL     <---------ALFIN1         --------------->AtSPL8  ================================ ============================================MADS_MADS    ---------->DOF2     <---------AtLEC2-------   caagattcaaccagtttcattcacacttctactatatatgctatttgtttgtactttaaaaaaagaaatcactaatttgagcatggagagataaacatgt  11462600                                                                                     <-----------GT1           --------->ICU4                                                           <---------AHL20(2)    --------->YAB1                                                              <---------YAB1  <-----------GT1                                                              <---------AHL20(2) <-----------GT1                                                               <---------AHL20(1) ---------AHL20(2)       <---------ANAC46                                      --------->AHL20(1)   < -------->AHL20(2)   --------->At4g35610                                  <---------AHL20(1)        < ---->GT1  <---------YAB1<---------AtLEC2      <-----------GT1            --------->AHL20(1)       -- ---ANAC55(2)   --------->WOX13(1)   <---------AHL20(2)              --------------->AGL15         <- ====================================================================================MADS_MADS    --- -->ANAC55(2) <---------YAB1         --------->AHL20(2)           <-----------GT1   --------->AHL20(2)   aatttatcatcttattattaatcagttgcatagaaatattaaaatgtattgacctctccatctataaatcaccatatatattatatttaactaaaacaaa  11462700                                                                <---------TOE1(2)                                                            <-------TEIL             <---------ALFIN1                                                           --------->GLK1(2)        --------->LBD16                                                          <---------GLK1(2)        --------->RAP2.6(2)                                  ------>ZmHOX2a(1)       <---------ARR14(2)       --------->DEAR3(1)                                ==============================RAV               --------->ANAC46      <-----------GT1           ----------->RAV1(2)       --------->ARR14(2)    --------->ANAC58 ---------RVE1(1)             <---------GLK1(1)          <---------GLK1(1)      --------->ANAC58 ---------CCA1(1)             --------->GLK1(1)         ----------->ARR10     ---------->DOF2  ------ ------->ARR11(3)            <---------GLK1(1)       <---------ANAC46      --------->ANAC46   <------ --------ARR11(3)      --------->ATHB12           <-----------RAV1(1)      <----------ID1    <------- ------>YAB1          --------->ICU4            <---------At4g35610      <-----------GT1     --------   tgatatttttgctcttctaactccatgatgggattcctggctctcactgcaactggtggagattcgtagcattttttacgacaagccgcacattcagatg  11462800                                                                                                    -                                                                                                    -                                                                                                  <--                                                                                              -------                                                                                              -------                                                                                             <-------                             <-----------ARR10                          <---------YAB1       --------                             <---------ARR11(3)                       --------->ZAT6       <--------HAHB4                       <---------ETT(2)                               --------->YAB1       <---------ICU4                  --------->ZAT18                             <------NtERF2               <---------YAB1   ----------------------->TaNAC69(2)                        ------>NtERF2                --------->ICU4 --->GLK1(2)      <---------ZAT18                           --------->DEAR3(1)          --------->YAB1 ---GLK1(2)       <---------ZAT14                          --------->ATERF1(1)   <---------MYB52(1) - --At4g35610      --------->ZAT14                        <---------ANAC58    <---------At5g28300<---- ->At4g35610 <---------At5g28300                         <---------ANAC58<---------ICU4<---------YAB1   ctggtgatgagcgtttacagtgctctcgacaaatcttactgcattctatctctgattttgcgtcgccttctatcactattaccgctagtatcataattat  11462900     --------->AtLEC2     <---------YAB1 <-----------HVH21 <-----------TGA1 -------->ANAC46 -------->ANAC58 ---------GT1  <----------DOF2 -->YAB1       <---------DAG2                                                            <---------AHL20(2) -->AHL20(2)  <---------YAB1                                                             <---------YAB1 --YAB1     <-----------GT1       --------->AHL20(2)                          --------->TOE2(3) ->ICU4  <---------ICU4         --------->TOE2(3)                          <XXXXXXXXXXXXXXXXXXXXMIR419 -------->ANAC58          <-----------GT1                <---------YAB1 --------->YAB1 --------->YAB1 -----YAB1  <---------AHL20(2)  <----------DOF2<----------DOF2         <---------YAB1<-----------TBP   aaacgtcatgctaattacttttgccatttttctactttaaatgtttcttctttatgtctatgaatgaattcttatgaaaacctcagtatttataattttc  11463000                                                                 ------------>CBF                                                             <------MYB83                                                             <------MYB46(1)                                                         <---------ARR14(2)                            <---------YAB1               --------->ARR14(2)                            <---------TOE2(3)         --------------->AGL15             <------------CBF       <---------WRKY45  <---------------AGL15           <---------ZAT14<---------AHL20(2)         <-----------------AGL3      <---------YAB1      --------->AHL20(2)         <-----------------AGL1    <---------ICU4       --------->AHL20(2)          ----------------->AGL3               -----------    --------->YAB1       <---------ATHB12            ----------------->AGL1             <-----------TBP   <---------YAB1      --------->WOX13(1)            ----------------->AGL2             --------->AHL20(2)   --------->ICU4    ------------>CBF---------->DOF2 <-----------------AGL2           <-----------TBP   agaccatgatgactacattgtttttcaattaatattagtcaaagttttgttaacttccatatttggtctcaatttgtaaggtgtttttttttatatatgt  11463100                                                                                  --------------->AGL15                                                                                  <---------------AGL15                            <---------YAB1                                       ----------------->AGL2                        --------->ARR11(3)                                       ----------------->AGL1               --------->ARR11(3)                                                ------------>CBF               <---------AHL20(1)                           <---------AHL20(2)   ----------------->AG               <---------ARR11(3)                      <---------MYB59           ====================  <---------DAG2        <---------GLK1(2)  <-----------------AGL2               <-----------GT1  <----------DOF2 <---------AHL20(2)       <-----------GT1 --------->AHL20(2)  <-----------GT1 >TBP          --------->AHL20(1)<---------YAB1      ------->TEIL   <----------DOF2   catactttatgttcaaatattttttagattttgatatgtttgaattctccatatggacctattttatattcttttttttttttaccaattcgagcatgga  11463200                                                                                           <---------ICU4                                                                                           <--------HAHB4                      --------->WRKY12                                                     --------->ATHB12                      --------->WRKY38(1)                                               --------->YAB1                  <---------YAB1                                                      <---------KAN4(2)                --------->YAB1                                                       --------->YAB1               <---------YAB1                                                  <---------ICU4              <-----------TBP                                                 --------->ICU4            <---------MYB52(1)                                              <---------ICU4 --------->YAB1           <-------GAMYB                                                    --------->ATHB12           --------->At5g28300                   --------->ZAT18            --------->ATHB51---------          ----------->GT1                        --------->ZAT14            <--------HAHB4<---------YAB1        <---------At5g28300              ----------->GT1                    --------->YAB1<---------ATHB12       --------->MYB52(1)         ---------->DOF2<---------ZAT18           --------->AHL20(2)      <-    <---------------AtSPL3   --------------->AGL15                         --------->ICU4 --------->ICU4 ============================================MADS_MADS                 <---------ATHB12--------->KAN4(1)   aatgaaaacttacggttattatagttgactgcattaaaaaggaaggaaaattgcactctatagccatagaacaatgaataattagtagaataatcattag  11463300                                              --------->GLK1(1)                                           ----------->GT1                                          <---------ANAC55(2)                                          --------->ANAC58                                          --------->ANAC58                                       <---------SPL7                                     <---------------AtSPL8                               --------->ANAC55(2)                               <---------ANAC55(2)       ---------->DOF2    <---------ICU4 <---------LBD16 >TOE2(3)              --------->TOE2(3) --------->SPL7                     <<<<<<<<<<<<<<<<<LFY ------TEIL         <-----------GT1  <---------------AtSPL3     ---------->DOF2           <---------YAB1   attcaaaatcaaagagtttttttttccttcattacataagtggtacggaaattcaagttacagataaaaagtttcagaatacaatggagagtatgtttag  11463400  Previous    Next  AGI:  At2g26865.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G36724.1) Range:  from: 11462691    to: 11462927    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version