Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <---------WRKY12                                                      --------->LBD16                                                      <-----------HVH21                                                     <---------ANAC46                                                  <---------ARR14(2)                                                  --------->ARR14(2)                                                 --------->ATERF1(1)                                                <---------DEAR3(2)                                                <---------ATERF1(1)                                                --------->ABI4(2)                                                <---------MYB46(3)                                               <---------DEAR3(1)                                              ------>NtERF2                                              <------NtERF2                                             ------------>AtMYB77                                             <---------RAP2.3(1)                                             <---------RRTF1(1)                                            <---------RRTF1(3)                                            <---------DEAR3(1)                                            <---------RAP2.3(2)                                            <---------RRTF1(2)              --------->ARR11(3)                                     <<<<<<<<<<WRKY26<---------ANAC55(2)    <---------GLK1(2)                               <---------MYB46(3)<-------GAMYB       --------->AHL20(2)                          --------->ZAT18  <---------LBD16         ----------->GT1                          <-------TEIL  ----------->RAV1(2)       --------->DAG2            <----------DOF2   <----------DOF2------>NtERF2       ---------->DOF2         <-----------GT1  <---------ZAT18 <-----------RAV1(1)  <---------HSFB2a(2)   --------->At4g35610    <----------DOF2      --------->ALFIN1 ------->GAMYB<---------MYB52(1)   <---------ARR11(3) -------ALFIN1        --------->ALFIN1  --------->At4g35610    --------->HSFB2a(2)   <---------At4g35610   ccacctctttgttactttgttagagaggtgcgcttgttgatcaactgcggcggttccgtcaacttcgaaaagtaattagatttttagagcagaccatttc  11450200                                                                                            <--------                                                                                            <--------                                                                                 --------->ANAC58                                       ---------->DOF2                       <-----------GT1---------                                    --------->AHL20(2)                 --------->YAB1    <---------AHL20(1)                                 --------->AHL20(2)                  ------>MYB83--------->ANAC58                                --------->AHL20(2)                   ------>MYB46(1)     --------->AHL20(1)           <-----------GT1      <---------AHL20(2)                 <---------MYB59       --------->AHL20(2)    <---------YAB1       ----------->GT1           ------->TEIL <-----------GT1  --------->ANAC46   -   ggttttctgatttgaaccggtttgagagagaaaaataaataaaaagaaatttgcacctataagttataaccaaacaaaattacaagtcaaatattttatt  11450300                                                                              --------->AHL20(1)                                                                              <---------AHL20(1)                                                                              --------->ARR11(3)                                                                              <---------ARR11(3)         --------->ARR11(3)                                                 --------->ARR11(3)         <---------ARR11(3)                                                 <---------ARR11(3)     ---------->DOF2                                                        --------->AHL20(1) -AHL20(1)                                      <---------MYB52(1)          <---------AHL20(1) -AHL20(2)  <---------AHL20(2)            <---------ATHB12               --------->AHL20(2)      <--- >AHL20(2)  --------->AHL20(2)  ------>ZmHOX2a(2)  <---------YAB1   <---------YAB1   ----------->GT1 -------->TOE2(3)            <---------PCF2    <-------GAMYB  <---------TOE1(2)  <---------AHL20(2)   ttcgtcaaaaagattttattgatagaatgtgggatcgatttctaatgactgttatttttgtttctaggttctgataaaaatattttttagttaaaatcag  11450400                                                                                                 ----                                                                                             <-------                                                                                             --------                                                                                          -----------   <----------DOF2                                                                  <---------MYB52(1)  <---------ANAC58                                                           <---------------AtSPL3  <---------ANAC58               <---------YAB1                 --------->TOE2(3)--------->SPL7  <--- ------ICU4<----------DOF2     --------->YAB1          <-------TEIL         <------------------SPL14   tattgctttctgactttctcagacatcacaatctcataatacatcgtgagagatagattcaaacatccctaattccaaacttgtacggtatgtgttaaat  11450500                                                                                                    -                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                  ---                                                                                                  <--                                               <---------AHL20(2)                                 ---                                               <---------YAB1                                     <--                                               --------->AHL20(2)                                 <--                                               ----------->TBP                              <--------   --------->TOE2(3)                <---------DDF1                                        --------->AHL20(1) ----->AHL20(2)                     ----------->RAV1(1)                                   --------->AHL20(2) --AHL20(2)                         ------>NtERF2                                         <---------AHL20(2) ->AHL20(2)                         <---------RAP2.6(3)                     --------->MYB52(1)   <--- >GT1 ---------->DOF2      --------->YAB1--------->AHL20(2)         <----------ID1       --------->AHL20(2) ------AHL20(2)   ------>ZmHOX2a(2)<---------ETT(1)                 ----------->GT1 --------->YAB1---   taaaaacttaaaacgactgatccctaatatcaaaatgccgacataaaatataaatggaagcgttgaattagggaaaaaaaacagaatcaaaattaattga  11450600 <---------YAB1                                                                            --------->GLK1(2) ----->ZmHOX2a(2)                                                                          <--------- --------At4g35610                                                                         --------->ARR11(3) -----ZmHOX2a(2)              <---------AHL20(2)                                           --------->ARR14(2) ------->CCA1(2)            <----------DOF2                                                <---------ARR14(2) ------>ARR11(3)         --------->GLK1(2)                                                 <---------ARR11(3) -------ARR11(3)         --------->ARR11(3)                                               --------->RVE1(1) ------>AGP1             <---------ARR11(3)                                               <---------GLK1(1) -------AGP1             --------->ARR14(2)                --------->DAG2      --------->At4g35610 -------ARR14(2)         <---------ARR14(2)               ---------->DOF2      <---------At4g35610 ----CBF                <---------ARR14(1)--------->HSFB2a(2)                  <---------ZAT2 ------GLK1(1)          <---------GLK1(2) <---------HSFB2a(2)                  --------->ZAT2 ------>ARR14(2)  ---------->DOF2      *TSS     >>>>>>>>>TBF1     ---------->DOF2 --------->At4g35610   gatctgattacaaaaaaaaaaaaagagaatctttatttgtatttgcagaagaagaagagaaaaagtttgaaagaaaatgggagcagcgaagaatatctgg  11450700                                                                   --------->bZIP60(2)                                                                   --------->TGA1a                                                                   --------->ANAC58                                                                   <---------TGA1a                                                                   --------->ANAC58                                                                   --------->ANAC55(2)                                                                   <---------O2                                                                   --------->O2                                                                   ===============bZIP_DOF                     --------->ZAT2                                --------->ANAC55(1)                     --------->At4g35610                           <---------ANAC55(2)                     <---------At4g35610                         <---------ALFIN1                 <--                    ------->TEIL                                <---------REM1(2)               -----                  <-------TEIL  --------->DEAR3(1)            <---------ETT(2)                  -----           --------->DEAR3(1)  <------NtERF2                  --------->ETT(2)                 ------         ------->GAMYB        ------>NtERF2                <---------DEAR3(1)            <---------ICU4      <---------ATERF1(1)    --------->DEAR3(1)         --------->MYB52(2)               --------->ATHB12      --------->MYB52(1)<---------DOF5.7(2)            --------->SPL7  <----------DOF2  --------->ICU4     <---------WRKY38(1)--------->MYB52(1)            <---------MYB52(1)                <---------YAB1    --------->MYB46(3)<---------MYB52(2)    <---------MYB52(1)----------->HVH21       --------->YAB1 --ARR10--------->DEAR3(1)   <---------DEAR3(1)<---------YAB1<------NtERF2         ------>ZmHOX2a(1)   gcattagccaacgccgaagatgcagctaacgacgccgaacaaatcccttattcttcgttcgtcgtcgacacgtctttgcctcttcctctcatgattcctc  11450800                                                              <---------ARR14(2)                                                  <---------MYB52(1)                                                 --------->LBD16       --------->MYB52(2)                       <---------ANAC55(1)      <-------TEIL                              --------->ANAC55(2) --------->YAB1                                 <---------ANAC58 -------CCA1(2)                                 ----------->GT1--------->CCA1(2) ---->TOE1(1)           <-----------GT1         <---------ANAC58               ------>ZmHOX2a(1)    > ---->TOE2(1) ------>ZmHOX2a(1)                 <---------ANAC46               ====================== >ZmHOX2a(1) --------->TOE2(3)                  <---------ANAC55(2)            ======================   gtatcatgttcgtttccttatctaattttcttctcatttgatagctcgttccgtgaattttggagatttgattttgttttcctccttgaaattgggattg  11450900                     <---------ARR11(3)                  --------->HSFB2a(2)                  <---------HSFB2a(2)        ------>ZmHOX2a(2)       --------->GLK1(1)       <---------GLK1(1)       <------ZmHOX2a(2)      <---------ARR14(3)      <-----------ARR10      --------->ARR14(3)      --------->ARR14(2)      --------->ARR11(3)                                          <------MYB83                      <      <---------AGP1 <<<<<<<ZML2                 <-----------GT1  <------MYB46(1)                  <-      <---------ARR14(2)                         <---------AHL20(2)                                <-      <---------ARR11(3)              <---------YAB1             <---------AtMYB61    <---------MYB46(3) >>>>>>>>TBF1----------->HVH21      <----------DOF2             <---------WOX13(1) <---------MYB46(3) =============HOX2a_HOX2a          <---------ANAC58     --------->ZAT6        <------NtERF2        <- ==============HOX2a_HOX2a         <---------ANAC58 <----------DOF2    <---------ANAC46     ---------   aagaagaagatctctctgacctagaacttacaaattggcttttattgctattttctttacacttggattggttttgtggaggcagtagttgttgtaaagt  11451000                             <---------CCA1(2)                           <----------DOF2                           <---------DAG2                          --------->TOE2(3)                               --------->YAB1      ----------->GT1<---------HSFC1(2)                      <---------ANAC58        ---------->DOF2 ----------DOF2      <---------HSFB2a(1)                     <---------ANAC58     --------->AHL20(2) --------ANAC46      --------->HSFC1(2)                      <---------ANAC46   --------->TOE2(3) --------ANAC58      --------->HSFB2a(1)                <---------ZAT6  <---------AHL20(2) --------ANAC58   ---------->DOF2          --------->ZAT6    <---------ANAC55(2)--------->TOE1(3) ->DOF2         <---------ZAT6<---------ARR11(3)     <---------MYB52(1) --------->AHL20(2)<---------YAB1   tgctttgatggtgacatagtgaaagcttcctttatcttcttgttaagactgcttcgttgtgttacttatgagattaaaataacattaaaaagatgataag  11451100  Previous    Next  AGI:  At2g26830.1    Description:  EMB1187 (EMBRYO DEFECTIVE 1187); kinase/ phosphotransferase, alcohol group as acceptor. similar to choline kinase, putative [Arabidopsis thaliana] (TAIR:AT4G09760.2); similar to choline kinase, putative [Arabidopsis thaliana] (TAIR:AT4G09760.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63497.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65642.1); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Choline/ethanolamine kinase (InterPro:IPR002573) Range:  from: 11450639    to: 11454249    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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