Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   --------->ANAC46                                                 --------->ANAC58           <---------MYB46(3)                    --------->ANAC58                       <---------LBD16         <---------ANAC46--------------->AGL15 <---------ALFIN1                      <---------ZAT14<   aaatgagtgttgtttgttaatctcttgcaccatatagaatgggctcgtctcaccccattccattgcatttttcagcaatagtttgagttctctggagaaa  11439400                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                    ----------->GT1                                                                                    --------->LBD16                                                                                   <---------HSFB2a(2)       <-------TEIL                                                                --------->ANAC46    --------->At4g35610                         --------->WOX13(1)                <---------LBD16    <---------At4g35610                       <---------YAB1                <---------ICU4    <------   --------->MYB59                <-----------GT1                          --------->ICU4     ------- -----------HVH21 --------->AHL20(2)        --------->YAB1        <---------GLK1(2)--------->HSFB2a(2)   atggtcaggtccattgctcaaaaaatatgttcaaatataccacaaattatcattcaaattccaaaatcgattctctactaattatccggaaaatcaataa  11439500                       <------ZmHOX2a(1)        ------->TEIL  ----------->GT1 ----AHL20(2)         <----------ID1                             --------->YAB1 --->AHL20(1)        --------->MYB59                          --------->YAB1 --->AHL20(2)  <---------------AGL15               <---------ANAC58             --------->At4g35610 ----AHL20(1)  --------------->AGL15               <---------ANAC58      <----------DOF2 ---ATHB12    <-----------------AG               --------->GLK1(2)     <----------DOF2 -->AHL20(2)<-----------GT1                     <---------GLK1(2)<---------ICU4 <---------At4g35610   attcaacatgaatttcacaaaattaggaaaaatgttctccgattagaacagaatcgtgctgcaaaaatcatcgctctttgtgatcagccctaacattcta  11439600                                                              ----------->GT1                  <-----                                                         <---------HSFB2a(2)          --------->ANAC58                                                         --------->HSFB2a(2)          --------->ANAC58                                                        <---------LBD16               --------->ANAC46                                                <---------AHL20(2)              --------->GLK1(2)                                                --------->AHL20(2)      --------->At4g35610  --------                     <---------DOF5.7(2)       <---------WOX13(1)<---------AHL20(2) <-----------RAV1(2)                     --------->MYB52(1)    --------->LBD16--------->LBD16       <-----------ARR10   -          --------->At4g35610           <---------At5g28300  ----------->GT1   <---------GLK1(2) <---       <------ZmHOX2a(2)               <-----------GT1 ------>ZmHOX2a(1)<---------At4g35610 ---------   ttgaattcgatcagcgtaagagataacgaagagtctgaaatttaccgtgattaattcctccggaggtttaattccgatgaagaatctcaggcaatgagat  11439700               <---------bZIP60(1)               <---------ANAC55(1)               --------->TGA1a               <---------O2               --------->O2               <---------ANAC58               <---------TGA1a               --------->bZIP60(1)               --------->ANAC55(2)               <---------ANAC55(2)               <---------ANAC46               <---------bZIP60(2)               <---------ANAC58              ----------->STF1             <---------TGA2(2)            ----------->HVH21           <-----------HVH21 ----GLK1(2)----------->TGA1                                               <------MYB46(1) --->ARR10--------->LBD16                                                  <------MYB83             < --------->ID1<-----------------------TaNAC69(2)        <-----------GT1  <--------P                 - ----TEIL <---------At4g35610                  <-----------HVH21      <---------YAB1  ------>ZmHOX2a(1) >YAB1  <---------LBD16                  ----------->HVH21      <---------ATHB12      <----------DOF2   tcgtcgtttttccggtgacgtgaagaagacggagaatgaagaagggacgcgtcaagtttatctccactaattctggttgggaggggtccttttggagttg  11439800             <---------AHL20(2)             --------->AHL20(2)        ------>MYB83        ------>MYB46(1)       ----------->RAV1(1)           <-----------GT1                                                -      *TSS  --------->AHL20(2)   <---------AHL20(2)                       ----------->RAV1(1)<-------   >>>>>>>>>>WRKY43              --------->AHL20(2)                 <---------WOX13(1)       --------   >>>>>>>>>>WRKY26         <---------ATHB12                      --------->ATHB12           --------   >>>>>>>>>>WRKY38       --------->WOX13(1)                <----------DOF2           <------------CBF ---------At4g35610     ------------>CBF            <----------DOF2<------------CBF <---------AHL20(2) -------->At4g35610    --------->TOE2(3)         <-----------GT1 <---------YAB1     <---------YAB1  <   gaagatgaccaacatttaatttagacctcaatcaatttataacatgttttttttctttccttctttactgattggacaacaaatttttaattgagtaaac  11439900                                                                                              -------                                                                                              <------                                  <---------AHL20(2)                                          <------                                  --------->AHL20(2)                                         --------    <---------ZAT6               --------->AHL20(1)                  <---------AtMYB61       --------    ----------->GT1              <---------AHL20(1)                --------->ALFIN1         <-------- -------->ZAT14                  --------->AHL20(2)                <---------ANAC46      --------->AHL20(2) --ZAT14                ----------->GT1     <---------AHL20(2)   <---------ANAC58       <---------AHL20(2) ->ZAT14            <---------AHL20(2)     <---------AHL20(2)    <---------ANAC46       --------->AHL20(2) ->ZAT18           --------->AHL20(2)      --------->AHL20(2)    <---------ANAC58   --------->AHL20(2) ---------ZAT14   <---------YAB1 <---------AHL20(2)           --------->ALFIN1------>ZmHOX2a(1)   tgtatagtgtaacttaagttattatatggtggaaatttatttgaataaaattgaccctaaccaagtggtgtgtggtagtccttgttttaaataaataata  11440000                                                                   ------>ZmHOX2a(2)        --------->TOE2(3)                                 --------->AHL20(2) -->AHL20(1)                                          --------->ANAC58 ---AHL20(2)     <---------------AGL15                --------->ANAC58                             <- ---YAB1--------->TOE1(3)                             <---------ANAC55(2)      <-----------RAV1(1) -- ->AHL20(2)      --------------->AGL15         <---------ANAC58  --------->ARR11(3)             <---- ->YAB1 <----------DOF2 ----------->GT1        <---------ANAC58  <---------ARR11(3)     ----------->GT1 -AHL20(2)--------->AHL20(2)      ---------->DOF2     ----------->GT1      <---------AHL20(2)--------   ttggtttaaactttaaatactaaaatgagtaaaaaaaaaagcctatatttcttgttacgaaaaaatagatcgtgtatttttttgtgggaatagaaattat  11440100             <---------AHL20(2)                                                                 <----            <---------AHL20(2)                                  <-----------GT1              <-------            --------->AHL20(2)                            --------->ARR11(3)                 --------        <---------YAB1                          --------->AHL20(2)                          <--------        <---------AHL20(2)                      <---------AHL20(1)                         --------->AHL20(1) <---------ANAC46               --------->AHL20(2)        <---------ARR11(3)               <---------ARR11(3) --------ANAC46                <---------AHL20(2)        --------->YAB1                    <---------AHL20(1) --------->GT1          --------->LBD16  ----------->GT1<---------YAB1             ----------->GT1 -------RAV1(1) <-----------GT1--------->AHL20(2)    <---------AHL20(2)         --------->TOE2(3) ->ICU4<---------AHL20(2)    --------->YAB1     <---------AHL20(2)     ----------->GT1     --------->ARR11(3)   gtggtgtatttttattaaatactttccccaaaaataaataacatggttattttattttatgatattaaacgatttgttaaaacattagtaaaatatatct  11440200       <-----------GT1      --------->TOE1(2)    ------->TEIL                                                                        <---------ARR14(2) <---------ANAC58                                                                       <---------ARR11(3) --------->ANAC55(2)                                                                    <---------ARR14(3) <---------ANAC55(2)                                                                    --------->ARR14(3) <---------ANAC58                                       <----------DOF2                 --------->ARR11(3) ------DOF2             ----------->GT1              --------->ARR11(3)                 --------->ARR14(2) --ARR11(3)          --------->YAB1                  <---------AHL20(1)                <---------CCA1(2) ->ARR11(3)      <---------YAB1                      <---------ARR11(3)      ---------->DOF2       <- -CCA1(2)      <-----------GT1                      <---------CCA1(2)      <---------MYB52(2)      <-   tttacgtacttacgatattactatagtagtaaaactttgcaaacttaagtcccaatatctttttttttcgaatatcaactaaagtcccaatatcttcagt  11440300  Previous    Next  AGI:  At2g26800.1    Description:  hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putative. similar to MAM1 (2-isopropylmalate synthase 3), 2-isopropylmalate synthase [Arabidopsis thaliana] (TAIR:AT5G23010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67270.1); contains InterPro domain Pyruvate carboxyltransferase; (InterPro:IPR000891); contains InterPro domain Aldolase-type TIM barrel; (InterPro:IPR013785) Range:  from: 11436100    to: 11439806    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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