Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <---------ANAC46                                                     <-------TEIL                          --------->ZAT14         --------->At4g35610                          --------->ARR14(2)      <---------ZAT2          ----------->RAV1(1)                     <---------HSFB2a(1) ---------DOF2           <---------MYB52(1)       <---------At4g35610 --->ANAC58          -------->P                   <---------HSFC1(2)                          ------- --->ANAC46          ------>MYB83                 --------->HSFC1(2)                   --------->MYB46(3) --->ANAC58          ------>MYB46(1)            <--------P   --------->HSFB2a(1)  <----------DOF2 --GT1<---------ETT(2)   --------->DOF5.7(2)   <---------MYB52(1)          --------->YAB1---------->DOF2   cctttatatcgacaacacaatccaaccgtttactctgaaacaaaacatcggtagcttcgtcgaacataccaagactaacataagctttaaccaaagcacc  11434300                                     --------->ZAT2                                     <---------ZAT2                                     <---------At4g35610    --------->YAB1                                 --------->TOE2(3)         <---------ATHB12       --------->ANAC46                      ------>ZmHOX2a(2)                  --------->WOX13(1)       --------->ANAC58                      ===================HOX2a_HOX2a  --------->TOE2(3)           --------->ANAC58         --------->YAB1     <----------DOF2       <---------ATHB12    --------->ZAT14              <- ---->RAV1(1)     <---------ATHB12------>ZmHOX2a(1)<---------ARR11(3) <---------ZAT14   ------>ZmHOX2a(1)   agagactcgaatcaaaacaaatgatcgtttcttttcctcagcttgttcaccaataacttcaatcaaatccattacagtgaaaccacgctcctcgttctta  11434400                                                                        --------->ICU4                                                                   <---------ANAC58                                                                   <---------ANAC46                                                   <---------GLK1(1)   --------->ANAC58                                            ----------->GT1        <---------ANAC55(1)     --------->ANAC46                                     --------------->AGL15         <---------ANAC55(2)     --------->ANAC58                 --------->GLK1(2)   <---------------AGL15         <---------ANAC58        --------->ANAC58                 <-----------ARR10  ----------------->AGL2         --------->ANAC55(2)<---------ZAT18 --------ICU4   <---------GLK1(2) <---------ALFIN1 --------->GLK1(1)   --------->ANAC58  <---------ALFIN1   attagttcaactaaaacagaatctaacttgatgtccaaaccccaagtagtaagaattctgacaagagttgcgtaagcattgacattaggggacacaccat  11434500                                --------->CCA1(2)         <-----------HVH21     --------->ARR14(2)      <---------At4g35610      <---------ARR14(2)              --------->At4g35610      --------->At4g35610    ----------->ARR10            <------ZmHOX2a(1)  ------>ZmHOX2a(1)    ---------->DOF2                 <---------LBD16--------->ARR11(3) --------->TOE2(3) <----------ID1    <-----------HVH21 <-----------RAV1(2)          <---------ZAT2<--   gttccttaagctgtcgcaaaaacgacaaagcgagatttgggtcatctctggtactattcaggagtcgctgaagaccatgttgagtaagcttggagagatt  11434600              <---------ZAT2              --------->At4g35610              <---------At4g35610                                                  <---------RAP2.3(3)             <-----------RAV1(1)                                      --------->ANAC58           <---------At4g35610                                        --------->ANAC58           --------->At4g35610                      --------->At4g35610           <---------At4g35610           <---------ZAT2                   <---------MYB46(3)     --------->ARR14(2)  <----------DOF2           --------->ZAT2                 >>>>>>>>>ARR1          ----------->ARR10--------->ATERF1(1)          <-----------RAV1(1)             >>>>>>>>>ARR1         <------NtERF2     <------NtERF2        <---------At4g35610               >>>>>>>>>ARR2       <---------ANAC46   <---------MYB46(3)        ----------->RAV1(2)       <---------YAB1    <---------ZAT14<---------ARR14(2)<---------At4g35610        =================RAV      --------->ICU4    <---------At4g35610          <---------ATERF1(1)      <-----------GT1  <---------GLK1(2)  >>>>>>>>>ARR2      <------NtERF2      <---------RAP2.6(2) <---------YAB1  <---------At4g35610     <------ZmHOX2a(1) <---------DEAR3(1)   --------->ALFIN1 -------TOE2(3)  --------->At4g35610    <---------YAB1  <---------ARR14(2)   --------->ALFIN1       -   aagatgattcacctgctgctgctcagagtctgagagattattaggattgttgagagcagagacggcgtagaaacgcgaagaggtggctgctcttcgtcga  11434700                                                               ----------->HVH21                                                             <------------CBF                                                            --------->ATHB12                                                           <---------YAB1                                                        <---------ARR14(2)                        <--                                                        --------->ARR14(2)                 --------->ARR14(2)                                                       <------NtERF2                       <---------ARR14(2)                              ----------->GT1        <---------ANAC58                      --------->GLK1(2)                              <------MYB83           <---------ANAC58                      <---------ARR11(3)                              <------MYB46(1)        <---------ANAC46                      --------->ARR11(3)   --------->YAB1           <--------P              <---------LBD16                       <---------ARR14(1) -------->WOX13(1)        <---------HSFB2a(1)   <---------ICU4<---------WOX13(1)          <---------GLK1(2)   gtcaatcgcaattgtgagagtaagaagaaggttggagaaaaccgcatcaaaaatggcggatttgattgacagagtaatcgaagaagatgagagaatcttt  11434800                                   ----------------->AGL3                                  <------ZmHOX2a(2)                                 <---------ARR14(2)                          --------->ZAT6                         --------->ZAT14                         <---------ZAT18                         <---------ZAT14--------->AHL20(2)                       <---------At4g35610     <---------STY1(2) --------->TOE2(3)     --------->At4g35610     --------->STY1(2)       <---------TOE2(3) --------->TOE1(3) <-----------HVH21    <---------AHL20(2)         <----------DOF2  <---------MYB52(1) ---------GT1  <------------CBF  --------->ARR14(2)           <------------CBF <-----------GT1    ---   aaaccctaaacccataacattggtcagaacactccgatccatttaaattagctagtaagtctaaaattggtttatggattttttccattagttccaaatg  11434900                                                                          <---------AHL20(2)                                                                         <---------AHL20(1)                                                                         --------->AHL20(1)                                                                        <---------AHL20(2)                                                                      --------->AHL20(2)                                                                      <---------AHL20(2)                                                                      <-----------TBP                                                                    --------->AHL20(2)                                                                    <---------AHL20(2)                                                                    <-----------TBP               <------------CBF                                   --------->AHL20(2)            --------->AHL20(2)                                    <---------AHL20(2)            --------->YAB1                                        <-----------TBP         --------->WOX13(1)                                     --------->AHL20(2)       ------------>CBF                                         ----------->TBP    <---------WOX13(1)                                         --------->AHL20(1)              <-----   <------------CBF                     <---------AHL20(2)     <---------AHL20(1)              ------ --------->AHL20(2)      --------->AHL20(2)                   --------->AHL20(2)             ------>ZmHOX2a(2) <---------AHL20(2)      <---------AHL20(2)                 --------->AHL20(2)         <----------DOF2 ---->TEIL <---------ATHB12  <---------AHL20(2)           --------->AHL20(2) XXXXXXXXXXXXXXXXXXXX>MIR870   tatttaattgccaatcaaattgaagaaataaatatttgatatttcatttgcccaaaaaaaaaaaatatatatatatatatttgatatttctttgatcctt  11435000                                                        <----------DOF2                                                       ------>ZmHOX2a(2)                                                      <------ZmHOX2a(2)                          <---                                                      <---------RVE1(1)                         -----                                                     <---------AGP1                         <--------                                              --------->AHL20(2)                            <--------                               --------->AHL20(2)    --------->ARR11(3)                     ---------                     <---------ANAC55(2)     --------->YAB1                               <---------RVE1(1)         <------------CBF --------->ICU4--------->AHL20(1)                                <---------CCA1(1)    <---------HSFB2a(2)   --------->MYB46(3)--------->AHL20(2)                           <---------ARR11(3)    --------->HSFB2a(2) <-----------GT1 --------->AHL20(2)                               --------->ARR11(3)  <---------ANAC46   --------->ANAC55(2)<---------AHL20(2)                       <---------HSFB2a(1) -----DOF2        <---------YAB1   --------->AHL20(2)<---------ARR11(3)     <---------HSFB2a(2) <---- >ZmHOX2a(1)    --------->YAB1--------->AHL20(2)     --------->AGP1         --------->HSFB2a(2)<-----   tgttttgtagaaattgaattatcatgtaaccattaaaaaaaataaaataaaaatagatcttttgcatatgttttttttttggaacatttgagatattatt  11435100     ----------->RAV1(1)    --------->ANAC46    ----------->HVH21 ------AHL20(2) ---->AHL20(2) -AHL20(2) -YAB1                                          <-------TEIL                   <---------ANAC46 >ICU4                                       <------MYB46(1)                   <---------ANAC58 -----AHL20(2)            <-----------GT1    <------MYB83                      <---------ANAC58<----- ----YAB1            ----------->GT1    --------->ARR11(3)         ---------->DOF2      <----------DOF2   aattagacgacagagttatcacattgtaaaacctctctaatagagcttggtacatagaaatggaagattgaaagcacattgtcttgtagactttgttttg  11435200  Previous    Next  AGI:  At2g26790.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G13800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48949.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 11432348    to: 11434747    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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