Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            <-------GAMYB                                        --------->ARR14(3)                               --------->MYB52(2)                                        --------->ARR14(2)                               <---------MYB46(3)                                        <---------ARR14(2)                               <------MYB83                                        --------->ARR11(3)                               <------MYB46(1)                                        <---------ARR14(3)                             <--------P                                 --------->WOX13(1)                                   <---------ANAC58                  <---------MYB46(3)--------->YAB1                           <---------GLK1(1)                 <---------AtMYB61 <---------ATHB12                  ---------->DOF2  <---------ANAC58           <---------LBD16     <---------ATHB12       --------->TOE2(3)      --------->GLK1(1)     --------->TOE1(3)      <---------AHL20(2)        --------->TOE1(3)     >>>>>>>>>>GATA-1  <------     --------->TOE2(3)     --------->AHL20(2)  --------->TOE2(3) <---------ANAC46    --------->ATHB12 >P --------->At4g35610<---------YAB1   <---------ARR11(3)      <------ZmHOX2a(1)    <---------MYB46(3)   catataagcttaatctggaatggttgtgatttaatcaatgaagatattgcctcaaacctgaatagaggagtgaaagtggatttcaattggttggttatca  11416800                                                    --------->ICU4                                                  --------------->AGL15                                            --------->ATHB51                                            --------->ATHB12                                            <---------ICU4                                            --------->YAB1                                            -------->ATHB1                                            <--------ATHB1                                           --------->ICU4                                         --------->WOX13(1)                                        ------------>ATHB5                                       ----                                       <---------ATHB12             --------->ZAT18              ----                                      --------->ANAC58    <---------YAB1                         ----                    --------->MYB52(2)--------->ANAC58   --------->ARR11(3)                   -------                  <---------MYB52(1)  --------->ANAC46   <---------ARR11(3)                 <-------- ---YAB1 <---------YAB1      ------>NtERF2 <---------ATHB12--------->ATHB12                 ---------   aacccatcagcatgatacctgttagtttctcggccataccactcaatcattgccataaatatcattgaagtctactagtctgtttgagacattcaactca  11416900         <-------GAMYB        <------MYB46(1)        <------MYB83        ----------->GT1      <---------ANAC46                    <---------AHL20(2)    <---------MYB46(3)                   <---------AHL20(1)   --------->ALFIN1                      --------->YAB1 ----->ANAC46                            <---------AHL20(2) ----->ANAC58                       <---------ATHB12                            <------ZmHOX2a(1) ----->ANAC58                --------->ANAC58                               ---------->DOF2 >GAMYB<---------MYB46(3)    --------->ANAC58                               --------->MYB52(1) -At4g35610                  --------->ANAC46                    <---------ANAC46 >At4g35610         ----------->HVH21    --------->AHL20(2)     <-----------------------TaNAC69(2)   cacaagtggtgggttattttctctgacaaacacggccaaacaataaaattgctgaaaacaagaagttgcctaaaaaaccaaaggacttgtgagaaaaatg  11417000                   <---------ANAC46                   --------->ALFIN1                          --------->bZIP60(1)            <------ZmHOX2a(1)                                <---------bZIP60(1)      ------>NtERF2<---------MYB46(3)                        <---------O2  ------>MYB83     --------->LBD16                                         --------->O2  ------>MYB46(1)   <------NtERF2     --------->ZAT18                               --------->CCA1(2)      --------->ANAC46   ------>NtERF2    <---------ANAC58                        --------->MYB52(1)            --------->ANAC58  ---------    <---------ANAC58                     ----------------->AGL1 <---------ANAC46            ---------   <---------LBD16<---------DEAR3(1)--------->ARR14(2)    --------->ANAC46--------->ANAC58  ---------   gcaaatgcgggctaggatgggctgtggattagaggcccaatatgcctaatgggatacaacacgacgtcgtttagaccagccatagttctcttgtccgcca  11417100                                                    ---------->DOF2                                                 ---------->DOF2                    --------->YAB1            --------->ANAC58                 --------->DAG2               --------->ANAC58 >ANAC58        ---------->DOF2       ---------->DOF2 >ANAC46      <------ZmHOX2a(1)      --------->TOE1(2)*TSS  --------->YAB1 >ANAC58    <---------TOE2(3)  ------------------------>ANAC81   agacgggagagactaaggaaaagcataagaagagaagaaccaaagaagaagcaaagaagcactgataaatctctgcaactcaacaaatttctgagattag  11417200                                                                              =======================bZIP_DOF                                                                              --------->TGA1a                                                          <---------GLK1(1)   --------->O2                                                   --------->ALFIN1           <---------O2                                             <----------CDC5             --------->At4g35610        <-------TEIL                         ===========================================MYC_MYB       --------->ARR14(2)                   --------->At4g35610          <---------At4g35610     <---------HSFC1(2)                 <---------SPL7    --------->GLK1(1)   <---------TGA1a     --------->HSFC1(2)              --------->ARR14(2)  <---------ARR14(2)   --------->bZIP60(1)     <------MYB46(1)                 <---------ARR14(2)  --------->ARR14(2)----------->TGA1       ---     <------MYB83                ----------------->AG   <------ZmHOX2a(1)----------->bZIP910(2)   <--     --------->HSFB2a(1)  <---------MYB52(1)<---------At4g35610     ------>ZmHOX2a(2)            ----     <---------HSFB2a(1) --------->TOE2(3)--------->SPL7===================HOX2a_HOX2a    <----------DOF2   ctatggaaggttcttcatcttcgtcttcgttaatttccaaatcggacgctgagttggaggaaatgctcgatcggatgctgacgagactcgctctttgcga  11417300                                             <---------ARR14(2)                                             <---------ARR11(3)                         --------->ANAC58                                             --------->ARR14(2)                         --------->ANAC58                                             <-----------ARR10                     --------->ANAC58            <---------ARR14(2)               --------->ARR11(3)             --------->ANAC46      --------->ZAT2                         <---------ARR11(1)             --------->ANAC58      <---------ZAT2                        <---------CCA1(2)               --------->ANAC58 --->NtERF2 --------->ARR14(2)              <---------ARR14(1)          <---------MYB46(3)       ---- -------ATERF1(1)                   ------>ZmHOX2a(1)                  <---------MYB52(1)<-----------HVH21 ----->DEAR3(1)                 ------>ZmHOX2a(1)    <----------DOF2  <-------GAMYB--------->ANAC58<-   cgactccaagctcgaatccctagtctctaacctccttcctcttaccatatcttctctttcttctcaatctcccgttgttcgcaacaaggcaagtcagaga  11417400                                                                                   --------->ARR11(3)                                                                                   <---------ARR11(3)            <---------At4g35610                                             <-------TEIL            --------->At4g35610                                            <---------ARR14(2)            ------>ZmHOX2a(1)<---------TOE2(3)                             --------->ARR14(2)     <---------ARR11(3)     <-----------GT1             <-------GAMYB     <---------GLK1(2) ----->CCA1(2)             ----------->HVH21   <---------YAB1           <---------TOE1(3) ----------GT1         <---------ZAT6      <---------GLK1(2)         <-----------GT1   tttacgagctcttcctctgaatttagtgtttgacgatttcatattgattcttagtgtgtgttgatttcatttttcaggttcttgagatattgagtcatgt  11417500                                                                         <---------At4g35610                                                                         <---------ZAT2                                                                         --------->At4g35610                                                                        <-----------RAV1(1)                                                                      <---------ZAT2                                                                      <---------At4g35610                                                                     ------>ZmHOX2a(1)                                                                     <-----------RAV1(1)                                                                   ==============================HOX2a_HOX2a                                                                   =====================HOX2a_HOX2a                                                                   ------>ZmHOX2a(2)                                                                  ======================HOX2a_HOX2a                                                                  <------ZmHOX2a(2)                                                 <---------TOE2(3)===============================HOX2a_HOX2a                                             <---------DAG2      <---------GLK1(2)                                             <----------DOF2     --------->ARR11(3)                                      --------->ATHB12           <---------ARR11(3)                                    <----------DOF2              --------->ARR14(2)                                   <---------------AGL15         <---------ARR14(2)                                   --------------->AGL15         --------->AGP1                                  ----------------->AG         ----------->ARR10                                  ----------------->AGL2   <---------ZAT14                    <------                                  <-----------------AGL3   <---------REM1(2)              <------ZmHOX2a(1)                                  <-----------------AGL2   --------->ZAT14              --------->MYB59                                  <-----------------AG <---------------AtSPL8    ------>ZmHOX2a(1)               --------->At4g35610<-----------------AGL1   --------->ZAT18  <---------At4g35610   taacaagagagtgaagcatcagcatgaaattggtttgcctttattggctttatggaaattgtacacagatcctgctgctgctcctatggttaggaacttt  11417600                                                                                <---------ANAC58                                                                                <---------ANAC46                                                                                <---------AtLEC2                                                  --------->REM1(1)         <---------MYB52(1)                    <----------DOF2     <---------TOE2(3)                 <---------ANAC46                   <---------ANAC58   ---------->DOF2                     <---------ANAC58                   <---------ANAC58------>ZmHOX2a(1)          <---------MYB46(3)<---------ANAC58 ----DOF2     <---------At4g35610----------->RAV1(2) --------->TOE2(3)    <---------ANAC58   gctattgtctatgttgagatggcttttgaacgagctcctgcaaaggtttgcttcatcttaatagttgttggaatttgcgtttgcttgtcaatactttgga  11417700  Previous    Next  AGI:  At2g26780.1    Description:  binding. similar to hypothetical protein OsI_033816 [Oryza sativa (indica cultivar-group)] (GB:EAY79857.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67282.1); similar to HEAT repeat family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA91356.2); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain HEAT (InterPro:IPR000357); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) Range:  from: 11417154    to: 11430854    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version