Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     ---------->DOF2               <---                                                                  --------->AHL20(2)           <-----                                                                  <---------AHL20(2)           ------                                                            ----------->GT1   --------->ANAC58 <-----    --------->ANAC46                                  --------->ANAC55(2)     --------->ANAC46 ------ --------->ARR14(2)                                  --------->MYB59    <------ZmHOX2a(2)     <------ <---------ARR14(2)     <---------YAB1               <---------TOE2(3) --------->ARR11(3)  <---------AHL20(2) ------>GT1          <---------AHL20(2)              <---------TOE1(3) <---------ARR11(3)--------->ANAC55(2) --->ALFIN1      <---------AHL20(2)     ----------->GT1     --------->YAB1    --------->ANAC58-------   gagaatacaccataaatgtttattttcttatagttatccaagaggttaaatggtttaggtaatcgtaattaaagatcaatacgctaaacatatgtaatta  11395100                                                                                        --------->AHL20(1)                                                                                        <---------AHL20(2)                                                                                        --------->AHL20(2)                                                                                       <---------AHL20(2)         --------->ZAT2                                                                --------->AHL20(2)         ----------->RAV1(2)                                                        --------->AHL20(2)       <-----------RAV1(2)                                                          <---------AHL20(2)      --------->TGA2(2)                                                             <---------AHL20(1)     <-----------HVH21                                                              --------->AHL20(1)     <-----------TGA1                                                              --------->AHL20(2)    <---------ANAC58                                                               <---------AHL20(2)    <---------ANAC46                                                           --------->AHL20(2)    <---------ANAC58                                                           --------->AHL20(1) ------YAB1                                                                    <---------AHL20(1) ----ICU4--------->At4g35610                                                   <---------AHL20(2) <-- --->AHL20(2)                                                               --------->YAB1        --- ----AHL20(2)    <---------AHL20(2)                                        <---------AHL20(2)    ---- --->ATHB51      --------->AHL20(2)            ------>ZmHOX2a(1)       <---------AHL20(2)        <--- ---YAB1 <---------ZAT2               <---------ANAC55(2)              --------->AHL20(2)<---------AHL20(2) -->ICU4 <---------At4g35610        --------->AHL20(2) --------->ICU4 --------->AHL20(2)<---------AHL20(1)   ttttttgcgtcagctggattttattatgtcaatttcaattacttaaatcctaatgccataattcagtagcaatttaaataataaaataaattaatttgga  11395200                                          --------->AHL20(2)                                        --------->TOE2(3)                                   <--------                                        <----------DOF2                                     ---------                                   --------->YAB1             ---------->DOF2               <--------                                <---------ICU4              <---------YAB1                 <-------TEIL                                --------->YAB1            --------->YAB1                --------->At4g35610                               --------->ICU4           --------->ARR11(3)              <---------At4g35610 -------ARR11(3)             --------->YAB1             <---------ARR11(3)              <---------ZAT2 ------>ARR11(3)           <---------ARR11(3)          --------->YAB1                   --------->ZAT2 ----->GLK1(1)             --------->ARR11(3)      --------->MYB46(3)                  --------->ANAC46 ------GLK1(1)            --------->YAB1--------->TOE1(3)<---------YAB1            <-----------GT1---   tatctattcaaatgtactgtctcttcgaagataataatcaaactttaaattcaacaaatatcatcaaagcatgaaaattcaattgtttccagctacgtat  11395300                                                                                                  ---                                 <---------DAG2                                      <---------AHL20(2)                           --------->YAB1 ----------->GT1               <----------DOF2           <--    <----------DOF2      --------->AHL20(2)      <----------ID1         --------------->AGL15    ---- -ANAC55(2)              <---------AHL20(2)    ---------->DOF2          ============================= >ANAC55(2)             --------->TOE2(3)--------->AtLEC2  ---------->DOF2--------->AHL20(2)     ---- -ANAC46<---------TOE2(3)<---------YAB1<---------AtLEC2---------->DOF2  <---------------AGL15    ---- ------>YAB1    ---------->DOF2  <----------DOF2 ----------->GT1   <----------DOF2<---------AHL20(1)   taatagctttaatgtggaaaaagaaatattaatagcttttttcatggaaaaaagaaaaaaagaaagaaactttacttttaatagtatatttttgtctgag  11395400                --------->ARR11(3)                <---------AHL20(1)                <---------AHL20(2)                --------->AHL20(1)             --------->AHL20(2)           --------->AHL20(2)           --------->AHL20(1)          --------->YAB1        >>>>>>>>>>GT-3b   ---------->DOF2  --------->AHL20(2)                                                       ------>ZmHOX2a(1)       -- <---------ATHB12                                                          ==========================HOX2a_HOX2a ------------>AGL15                                                  ------>ZmHOX2a(1)        <------ZmHOX2a(2) -------------AGL15                                          <---------MYB46(3)              -------- -------->CBF--------->YAB1                   <---------WOX13(1)     ================================HOX2a_HOX2a ==============MADS_MADS     <---------AHL20(1)              --------->MYB52(2)      *TSS    <------- ------------->AGL3        >>>>>>>>>MYB98  <---------YAB1   <---------TOE1(2)    ---------->DOF2   <- ------------->AGL2       <-----------GT1--------->O2      <---------MYB52(1) --------->TOE2(3)  <---   ccaataaaagaaaaataatattttggtttaacatatttgtccctcgtgatagatttgattcgttcgttctccttctccttcattaaagacttcacgatcc  11395500         <---------ALFIN1       <---------ALFIN1     <---------ALFIN1                                                    --------->ETT(1)  --------->AtMYB61                                                 <---------ANAC58 ------->ANAC46                  --------->ZAT14                    <---------ANAC58 ->ARR14(2)                  <---------ALFIN1           --------------->AGL15 --ARR14(2)                <---------ALFIN1            ----------------->AGL2 --------ALFIN1            --------->ANAC58            <-----------------AGL3                   ----- ------ALFIN1              --------->ANAC58            ----------------->AGL3                   <----   cacacctccacacacattgactcacacacacacacttctctctccaagttcagaaaaaccaaaaatgggttcttgtcggaaaaccacttctggttttcag  11395600                                                                                                   <-                                                                                                   --                                                                                                   <-                                                     <---------MYB52(1)                            <-                                               <---------HSFC1(2)                            --------    ------>MYB83                               --------->HSFC1(2)                            <-------    ------>MYB46(1)                         ---------->DOF2                              ------------   <---------ALFIN1              ---------->DOF2  <-------TEIL    <----------DOF2        --------->LBD16 ---->At4g35610 --------->AHL20(2)    --------->ANAC58        ---------->ID1             <----------- -----At4g35610 <---------AHL20(2)    --------->ANAC58       <-----------GT1      <-----------GT1  <-   caaacccacttcttgtaataaaacagacaaaactagaaagaagcaaaaaagcttcgttttttttttctctttctccaaaaaaaaaaacccccccaaatat  11395700 <------NtERF2 --------ANAC58 ------->bZIP60(1) --------ANAC58                                                          --------->LBD16 --------bZIP60(1)                                                      ------->GAMYB ->ARR14(2)                                                            --------->MYB46(3) --ARR14(2)                                              <---------WRKY38(1)        --------->ANAC58 ----->AGL3                                      ---------->CDC5      -------->P    --------->ANAC58 ------AGL3                               <---------At4g35610        --------->MYB52(1)         <---- --------ANAC46                <---------HSFB2a(2)       <---------WRKY12--------->At4g35610------>ZmHOX2a(1)   ggcgtcaatttcatgggttttgaattctctattctcgatattgctactgactcagcgagtcaactcggaatcaaccgcagaaaaacaagcactcctcact  11395800                                                                                                 <<<<                                                                                                 <<<<                                                                                                 <<<<                      --------->ARR14(2)                                   --------->ANAC58      <<<<                      <---------ARR14(2)                           <------NtERF2          <---------ATHB12                      --------->GLK1(2)            --------->ZAT2<---------DEAR3(1)      ------>MYB46(1)                     <---------GLK1(2)             <---------ZAT2--------->ETT(1)        ------>MYB83      --------->MYB46(3)                           <---------At4g35610     --------->ANAC58--------->YAB1 ------DOF2 --------->ANAC46             <-----------HVH21     <-----------HVH21     XXXXXXXXXXXXXXXX   ttccttcaacaaatacctcacgagaatcgtcttcaatggaacgagtcagactcagcttgtaactgggtcggagtcgaatgcaactcaaaccaatcttcaa  11395900                                        ------>ZmHOX2a(2)                                        ====================HOX2a_HOX2a                                       =====================HOX2a_HOX2a                                       <------ZmHOX2a(2)                                      --------->ARR14(2)                   --------->ARR14(2) <---------ARR14(2)              --------->ZAT2                   <---------ARR14(2)--------->At4g35610              --------->GLK1(1)         --------->LBD16         <-----------HVH21                    <---------At4g35610       <---------LBD16          <---------DEAR3(2)                    <---------ZAT2 <<<<<GATA-1      <------ZmHOX2a(1)  <---------At4g35610              <---------GLK1(1) <<<<<GATA-3      ============================HOX2a_HOX2a           --------->ZAT14 <<<<<GATA-2      =============================HOX2a_HOX2a <---------ETT(2) <<<<<GATA-4    --------->ANAC46<------MYB46(1)        <---------AtMYB61   --------->LBD16 XXXX>MIR166A-G<---------LBD16  <------MYB83         ------>ZmHOX2a(1)--------->At4g35610   tccactctctccggttaccaggaaccggtttagtcggtcagatcccatcaggctccttaggtcgactcactgagctccgagttctcagtcttcgttctaa  11396000  Previous    Next  AGI:  At2g26730.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. Identical to Probable inactive receptor kinase At2g26730 precursor [Arabidopsis Thaliana] (GB:O48788;GB:Q949V3); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G02880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65595.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 11395485    to: 11398719    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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