Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            <---------DAG2                                                                ------>ZmHOX2a(2)                                                              <---------ARR11(3)   ---------->DOF2                                            --------->ARR11(3)   --------->YAB1                                            -------->HAHB4   <--------ATHB1                                            --------->YAB1  <---------ATHB51                                          <---------ATHB12  <---------ATHB12                                       ------>ZmHOX2a(1)<----------DOF2  --------->ICU4       ---------->DOF2            <-----------GT1  ----------->HVH21 -------->YAB1       <---------DAG2              <-----------GT1===========================HOX2a_HOX2a --->MYB46(1)        <----------DOF2         <---------MYB52(1)<---------YAB1 <-----------GT1 --->MYB83<---------ATHB12         <------ZmHOX2a(1)     ==============HOX2a_HOX2a  <-----------HVH21 ---->TOE1(2)   --------->GLK1(2)  ====================================HOX2a_HOX2a  ------>ZmHOX2a(1)   tacaataatgcaatcgagaatcactttaagccctcaaggacgctctcgttatttccctcctaatgatccttgacgacttttttctccttcacatgaaaca  11371800                                                  ------->TEIL                                            --------->ATHB12                                           <---------YAB1                                        <---------MYB52(1)           <---------MYB52(1)          --------->LBD16          --------->TOE2(3)           --------->ANAC46          --------->TOE1(3)          <---------LBD16     <---------DAG2                  --------->LBD16                <---------YAB1   ------->TEIL     <----------DOF2 <---------------AtSPL3--------->ICU4    <---------AHL20(2)    <-------TEIL   gtttcaactttacgttaatcgatatcgaacgtctatttccccgtaatgtttgaacgttgatattaaaactatttttgtaaaaccgtgcatcttaagacaa  11371900                                            <---------AHL20(2)                              <--------                                            --------->AHL20(2)                            --------->ARR11(3)                                           --------->AHL20(2)                 ------>MYB46(1)    <---                                           <---------AHL20(1)                 ------>MYB83<---------ARR11(3)                                           <---------AHL20(2)               --------->AtMYB61    <---                                        --------->AHL20(1)               --------->ANAC58--------->YAB1                                        <---------AHL20(2)               --------->ANAC46<---------ICU4                                       --------->AHL20(2)                --------->ANAC58-------->HAHB4                                  ------>ZmHOX2a(2)                   <---------ZAT18   --------->ICU4                            --------->ANAC55(2)   <-----------GT1 <---------YAB1       <---------TOE2(3)                            ----------->RAV1(2) <-----------GT1  <---------AHL20(2)  <---------AHL20(2)                           -------->P  <---------AHL20(2)        --------->AHL20(1)  --------->AHL20(2)                        <---------ANAC58--------->AHL20(2)       --------->AHL20(2) --------->AHL20(2)                        <---------ANAC58<---------AHL20(1)      --------->YAB1--------->AtLEC2   <---   aacatggtgtccaaaccaaaaatatgtcttacctgatccaaataaattattttcaccctcagaaaattataatgcacaccatccaaattaatgatcatgt  11372000                                                                  --------->ARR14(2)                                                                  <---------ARR11(3)         <---------HSFB2a(2)                                      <---------ARR14(2) -ICU4   --------->HSFB2a(2)     <---------GLK1(1)               <---------CCA1(2) ---------->DOF2 ------ANAC58                    --------->GLK1(1)          <-----------GT1    ---------->DOF2 ------ANAC46             <---------ANAC58        <---------AHL20(2)  ------>ZmHOX2a(1)             < ------ANAC58             <---------ANAC58<----------DOF2<----------DOF2 <-----------RAV1(1)     ----   cttgaagtcttctagcaccaaggctatttcgtcggaattcatttctttggttttaatttcttttactatatcctcatgttgcaaagaaagttgatggaat  11372100                            <---------ICU4                          --------->TOE2(3)                         <---------ICU4                               ------------>CBF          ----------->TBP<--------HAHB4                            --------->ZAT18 --------->GLK1(2)      --------->ICU4 <---------AHL20(2)     ------->GAMYB <-----------ARR10      <---------YAB1--------->AHL20(2)    --------->ANAC58 ---------GLK1(2)    <---------YAB1  ----------->TBP        --------->ANAC58  <----------DOF2 ----->YAB1    <-------TEIL<---------YAB1                 --------->MYB46(3)*TSS      -------->P   cagaatctatctacatatacattctgatcattaatgcctataaaatgacatgtttctcaaacaaccaagttcaccaattcctttcgcttaccagtctctt  11372200                                                                                   ------>ZmHOX2a(2)                                                                                  <------ZmHOX2a(2)                                                                                 <---------AGP1                                                                                 <---------ARR14(3)                                                                                 <---------ARR14(2)                                                                                 --------->ARR14(2)                                                                                 --------->AGP1                                                                                 <---------ARR11(3)                                                                                 --------->ARR14(3)                  <---------AHL20(2)                                      <---------YAB1             ==================================HOX2a_HOX2a              <---------ICU4             <------ZmHOX2a(2)                      --------->DAG2      --------->ATHB12         <-------TEIL<-----------GT1           <---------YAB1--------->HSFB2a(2) --------->ARR11(3)     <---------TOE1(2)                  ------>ZmHOX2a(1)    --------->ANAC46   <---------CCA1(2)     <---------TOE2(2)             <---------At4g35610  <----------DOF2 --------->YAB1          -----    <-----------RAV1(2)          <-----------GT1--------->YAB1         <---------ATHB12         <----   gtcttctcaggttcgatcatttttttccttcaattttagctccttcttcatcataaggcttttccacaactaaatcattactagatcttgagtaagttgg  11372300                                                                                             --------                                                                                             --------                                                                                             --------                                                                                            <--------                                                                                          <---------ZAT2                                                                                          --------->At4g35610                                                                                          --------->ZAT2                                                                                   <---------ANAC46                                                                                   <---------ANAC58                                                                                   <---------ANAC55(2)                                                                                   <---------ANAC58                          <-------GAMYB                                          <---------ANAC46                         --------->MYB111(2)                      ----------->ARR10--------->ANAC55(2)                         <---------MYB46(3)                      <------ZmHOX2a(1)<-------TEIL                        <--------P                           --------->LBD16   <---------ANAC58                     <---------TOE1(3)                   <---------WRKY18(1)   <---------ANAC58                     <---------TOE2(3)               <---------At4g35610      --------->ALFIN1                    <-----------RAV1(2)              --------->ZAT2 <---------ARR14(2)    <---------At4g35610             <-----------GT1               ----------->GT1 <---------LBD16    <-----------RAV1(1) ---->At4g35610 <----------DOF2    <-------TEIL      --------->At4g35610    <-----------RAV1(1) -----At4g35610 <---------DAG2    --------->CCA1(2)  <---------ZAT2 --------->ARR14(2)<-----------HVH21   ctgagtgctactagttaacttttcaggttgttagagatacatagatagaaatatgagctggaccggaggagattggctatgtggtgcgtgtcagcacgca  11372400                                         <---------ARR14(2)                                   --------->ANAC58                                                --                                   --------->ANAC58                                                <-                                 <---------GLK1(1)                                              <----                                 --------->GLK1(1)                                              <----                             <---------ANAC46                                                   <----                            <---------LBD16                                ----------->RAV1(1) <----- ->ANAC58       --------->YAB1  <---------ARR14(2)                 ------->TEIL               <------ ->ANAC46       <---------ICU4--------->LBD16                  --------------->AtSPL8         <------ ->ANAC58     --------->GLK1(2) --------->ARR14(2)  <--------P --------------->AtSPL3         <------ -ZAT18---------->DOF2   ---------->DOF2 --------->ARR14(2)  <---------WRKY12   <------ZmHOX2a(1) <--   aacttcaagaaaagagaatcatgtcaaaaatgcggataccccaaatttggaggggttgatgtgtcaacgtacttgtacaacaggaccgaagttatggctg  11372500   <------MYB83                                                                           --------->ANAC55(2)   <------MYB46(1)                                                                        --------->ANAC58 <---------WOX13(1)                                                                       --------->ANAC46 ------->ATHB12                                                                           <---------ANAC55(2) --------MYB46(3)                                                                         --------->ANAC58 --MYB46(1)                                                                            --------->ZAT14 --MYB83                                                                               --------->ARR14(2) -----At4g35610                         --------->ANAC55(2)                  ---------->DOF2   ------ ----MYB46(3)                           --------->ANAC46                 --------->YAB1<---------ZAT14 ---ANAC58    --------->ZAT18           <---------ANAC55(2) <-----------------AGL1  <---------ANAC46 ---ANAC58<-----------RAV1(1)   ----------->RAV1(1)        <-----------GT1 <---------YAB1 --------->ANAC55(1) ---ANAC46--------->ALFIN1   --------->PCF2    --------->DEAR3(1)       --------->ICU4 <---------ARR14(2) -------YAB1  <-------TEIL  <---------PCF2   --------->At4g35610       <---------KAN4(2) <---------LBD16   gtgattggtattgtggtgcattgaattgtgggagccacaattacgcgagccgaacaagttgttaccgatgtggaatgatcaaagtcgagtatacggaaca  11372600                                         <---------ANAC58                         --------->LBD16 <---------ANAC58                        <---------ANAC55(2)                        <---------ANAC46<---------ZAT2                       <---------LBD16  --------->ZAT2                     <---------SPL7     <---------At4g35610                    <---------ANAC58  <------NtERF2<---------HSFB2a(2)                          <----                    <---------ANAC46<---------ANAC58                                            -----                    <---------ANAC58<---------ANAC46                                <---------ANAC58                 <--------P    <---------ICU4      --------->LBD16                  <---------ANAC58               --------->ATHB12--------->ATHB12    --------->HSFB2a(2)  <---------ANAC58     --------       <---------At4g35610     --------->YAB1     <---------LBD16       <---------ANAC58   --------->ALFIN1       --------->At4g35610    --------->ICU4    ------>ZmHOX2a(1)   <-------GAMYB------>ZmHOX2a(1) <- --->ZAT6      <---------MYB46(3)   <---------ANAC58--------->LBD16<---------MYB46(3) --------->ALFIN1   gtactatggagctcaaatggttgcttacgggaatgatggcgcagcttgtcctcccggatggaaaactggcgattgggtttgtcctagggtgggatgtggg  11372700  Previous    Next  AGI:  At2g26695.1    Description:  binding. similar to zinc finger (Ran-binding) family protein [Arabidopsis thaliana] (TAIR:AT3G15680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46055.1); contains InterPro domain Zinc finger, RanBP2-type; (InterPro:IPR001876) Range:  from: 11372176    to: 11373043    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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