Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           --------->GLK1(2)                                                                        <---------ARR14(2)                                                           --------->AHL20(2)                                                           <---------AHL20(2)                                                           <---------AHL20(1)       <---------ICU4                                              <------ZmHOX2a(1)         --------->ARR14(2)                        <-------TEIL   <---------AHL20(2)  --------->AHL20(1)    --------->YAB1 ------TEIL      ---------->DOF2       --------->AHL20(2) --------->AHL20(2)<---------YAB1 >DOF2       --------->YAB1      <---------At4g35610<---------ANAC46    <---------GLK1(2)   gttcgtttttagctataaaaaaagagttcatttttagctaattaactaggacttctgtgaataaatttcacacagattcttattgataatggcataagta  11357700                                                                     ----------->TBP                                                                   ----------->TBP                                                                   <---------AHL20(2)                                                                   --------->AHL20(2)                                                                 <---------AHL20(2)                                                                 --------->AHL20(2)                                                               --------->AHL20(2)                                                               ----------->TBP                                                             <---------AHL20(2)                                                             ----------->TBP                                                             --------->AHL20(2)                                                           <---------AHL20(2)                                                         ----------->TBP                                                         --------->AHL20(2)                                   <-------TEIL          <---------AHL20(2)              --------->AHL20(2)   ------->TEIL        --------->AHL20(2)       --------->ANAC46 <---------ARR11(3)             ----------->TBP       --------->ANAC58 --------->ARR14(2)             <---------AHL20(2)       --------->ANAC58 <---------ARR14(2)           ----------->TBP <---------AHL20(2)  --------->ZAT14       --------->ARR11(3)          ------->TEIL ----------->TBP                  ---  <---------ZAT14       <---------ARR11(1)     ------>MYB83----------->TBP<-----------HVH21      *TSS  <---------ZAT18      --------->GLK1(1)       ------>MYB46(1) <---------AHL20(2)           <--------  --------->ZAT18      <---------CCA1(2)  <------ZmHOX2a(1)--------->AHL20(2)       ---------->DOF2   tatgtgcacacacaaaaaaaatggcatatctattatgtacatgaggaccaaatgtatatatatatatatatatatatgtcaagtagaaaagaagaagacg  11357800                            --------->MYB52(1)    <------MYB46(1)                           <---------ALFIN1       <------MYB83                           --------->AtMYB61    <XXXXXXXXXXXXXXXXXXXXMIR169A                          <---------MYB111(2)   <XXXXXXXXXXXXXXXXXXXXMIR169B/C                          --------->MYB46(3)   <------NtERF2                          <---------MYB52(2)  <---------DEAR3(2)                          <---------MYB55(2) <---------RAP2.6(2)                         -------->P          <---------At1g77200              --------->MYB46(3)                         ------>MYB46(1)     --------->ATERF1(2)          --------->At4g35610                         ------>MYB83        <---------ATERF1(2)     --------->ANAC46              <------NtERF2------->GAMYB     --------->ETT(2)        --------->ANAC58             ----------->RAV1(1)             --------->ETT(1)        --------->ANAC58    --------->YAB1    ------>ZmHOX2a(2)     --------->RAP2.6(3)     <---------LBD16       ------->GAMYB ---->TEIL <---------At4g35610   <---------ARR14(2)       ------>ZmHOX2a(1) --------->ANAC46  <------ --ID1     --------->At4g35610   --------->ARR14(2)       <----------DOF2 <---------At4g35610 <------   aaccaagaatgagagcggcagtgatccaaccaccggttttggatttgtcggcaggtcgtcctttgtagtctacggcatcagccactgtccaactcccttt  11357900                    --------->ANAC58    --------->ARR14(2)                    --------->ANAC46    --------->GLK1(2)                    --------->ANAC58    ------->TEIL                   <-------TEIL         <---------ARR11(1)                   ------->TEIL         <---------ARR14(2)                 <---------SPL7        <---------CCA1(2)               <---------------AtSPL3  <---------GLK1(2)               --------------->AtSPL8--------->LBD16 <---------ATHB12    ------>ZmHOX2a(1)   --------->WOX13(1)       --------->MYB46(3)    --------->LBD16--------->SPL7   --------->HSFB2a(2)                              --------->ANAC46  ----------->RAV1(2)--------->TOE2(3) <---------ARR14(1)                       <-----------GT1 ----DOF2  --------->MYB52(1)       <---------HSFB2a(2)                      <---------GLK1(2) <----- ---MYB52(1)  ------->GAMYB  ---------->DOF2   <-----------GT1           ---------->DOF2    <--------   gctctcctgaaaacaacgacgtacgtcaatccaaagttcccgaatcttataaccaatagtttacgagtaagaagaaaaagattatccaaaccattttttt  11358000                                                                             <---------WOX13(1)                                                                           --------->ATHB12                                                                           <---------ICU4                                                                          <---------YAB1                                                                          --------->ICU4                                                                        <---------ICU4                                                                        --------->YAB1                                                                       --------->ICU4                                                                       <---------ATHB51         <----                                                                       *TSS-------->HAHB4      <-----                                                                       <---------ATHB12      <-------                                                                 --------->ANAC58           <-------- ------GT1           --------->TOE2(3)                     ----------->RAV1(1)      <------ZmHOX2a(1) -AHL20(2)        <---------ARR14(2)              <----------DOF2--------->ANAC58<-----------RAV1(2)   ctatatcgccttgatgagagtattcttagtttcttctaagtgtttgtttgctctttgttagccacagaagcaaataatgatggacaggagactgcctttt  11358100                                     ------>MYB83                                     ------>MYB46(1)                                 ------>MYB46(1)                                 ------>MYB83                                --------->ORA47(1)                               --------->DREB2C(2)                               --------->DEAR3(1)                               --------->DEAR4(1)                               --------->MYB46(3)                                        <------MYB83                               <---------MYB111(1)                                       <------MYB46(1)   ----------->RAV1(1)         <---------MYB111(2)                           <---------ARR11(3)  <----------ID1              --------->DEAR3(2)                             --------->ARR11(3) -----YAB1                 <---------ABI4(2)                                --------->GLK1(1) ------TBP                --------->ANAC58                             ----------->GT1  --------->MYB59 ---DOF2                  --------->ANAC58                             <---------ANAC55(2)  <-------TEIL -DAG2          ---------->DOF2<---------MYB46(2)              ----------->GT1      <---------TOE2(3)   tatagccacaaaatgaatgaaagagggctagcaccgaccttccactatatgtgatttgggacatatcgcaaaaacgtgaaatctttgagataggttcatc  11358200                    --------->AHL20(1)              <----------DOF2              --------->TOE2(3)                                            --------->AHL20(2)              --------->TOE1(3)                                            <---------AHL20(2)           <---------ALFIN1                     <---------YAB1     <---------AHL20(2)          <---------ALFIN1       <---------AHL20(2)           --------->AHL20(2)         --------->LBD16         --------->AHL20(2)       <----------DOF2<----------DOF2        --------->ANAC46        <---------AHL20(2)    ---------->ID1     --------->TOE2(3)      <-----------GT1     --------->TOE2(3)   --------->AHL20(2)  <---------AHL20(1)     <-----------GT1<---------AHL20(1)        <---------AHL20(2)  <---------AHL20(2) <---------DAG2     <---------AHL20(2)       <---------AHL20(2)   --------->AHL20(2)   <---------AHL20(2) <----------DOF2 --------->AHL20(2)          --------->ICU4   <---------AHL20(2)<-----------GT1   ---   acacttttttccccaactttaaaatatttcttaatttatatttcgaaattatttttggctctttttaatttttttctttaattttctattttcttatttg  11358300                    --------->YAB1                   <---------YAB1                 --------->YAB1                                                          <---------YAB1                <---------YAB1                         ---------->DOF2                 --------->YAB1           <----------DOF2                         --------->PCF2               <----------DOF2      <-----------GT1                         <---------LBD16        ---------->DOF2  <------ZmHOX2a(2) -------->GT1 --------->YAB1   <---------AHL20(2) <---------PCF2 <-------TEIL<---------ARR11(3)  <---   ttgtaaattttctcttttatgatgataacttatttattcgacccaaactctgggtcccaaagacacatacatagagcgagaactttggatcatgaaacaa  11358400                                          <---------ARR11(3)                                          --------->ARR14(2)                                          <---------ARR14(2)                                <------ZmHOX2a(2)                           <---------ANAC58                   --------->AHL20(1)     --------->ARR11(3)                   <---------AHL20(1)     <---------GLK1(2)                   <---------AHL20(2) ---------->DOF2                --------->AHL20(2)   --------->AHL20(2)          <-----------GT1  <---------ANAC58--------->GLK1(2)  <---------YAB1               <--------- ------ALFIN1--------->TOE2(3) <---------ARR11(3)       <-------TEIL                <---------AHL20(2)   cacttgcatatttttccataaaatatttggcgagatcaaataaagattctcaacgaggttcattactattagtttccaactcttattttttttttacttc  11358500                                                       --------->ARR11(3)                           <                                                       <---------ARR11(3)                           <                                                      <---------CCA1(2)                             <                                                <---------AHL20(2)                                 --                                                --------->AHL20(2)                            <------                                              --------->AHL20(2)                             ------>ZmHOX2a(2)                                              <---------AHL20(2)                             ========                                            --------->AHL20(2)  <---------------AGL15       <--------                                           <---------AHL20(1)   --------------->AGL15       =========                                           --------->AHL20(1)  ----------------->AG         <------ZmHOX2a(2)                                          --------->AHL20(2)   ======================================                                      --------->AHL20(2)       ----------------->AGL1      <---------ARR11(3)                                --------->AHL20(2)<---------AHL20(2)                       --------->ARR11(3) <---------MYB52(2)------->TEIL <---------AHL20(2)--------->AHL20(2)                    --------->YAB1 --GT1          <---------MYB52(2)    <---------AHL20(2)  <----------DOF2   >>>>>>>>>TBF1  --------->AGP1   tccactaactattgaaaaacgaaccatatttgatataaatataaatatatatatatatatcttttgcctaaataagaagaagaatagcaatgagatcttt  11358600  Previous    Next  AGI:  At2g26690.1    Description:  nitrate transporter (NTP2). similar to NRT1.1 (NITRATE TRANSPORTER 1.1), transporter [Arabidopsis thaliana] (TAIR:AT1G12110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65652.1); similar to hypothetical protein OsI_002361 [Oryza sativa (indica cultivar-group)] (GB:EAY74514.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196) Range:  from: 11354225    to: 11358071    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g26692.1    Description:  other RNA Range:  from: 11357797    to: 11358371    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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