Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->ARR14(2)                     --------->ARR11(3)                    --------->GLK1(1)                    <---------GLK1(1)                    --------->RVE1(1)                   --------->ARR11(3)                   <---------ARR11(3)               --------->LBD16              <---------ANAC58               <----------DOF2                       --------->LBD16              <---------ANAC46              --------->TOE2(3)                     --------->LBD16              <---------ANAC58   ---------->DOF2                                 <---------LBD16             <---------LBD16    ------>ZmHOX2a(1)                                <---------HSFB2a(2)    ------>ZmHOX2a(1)<---------ARR14(2)<---------ANAC58                         <---------LBD16  <---  ----------->RAV1(2)<---------ARR11(3)<---------ANAC58<---------MYB59<-----------RAV1(1)       <----   tacctcctgaatcgttgcggagatatctggtttcctaaagggcttacctttaagtagcctaacaatgttcttatgtggtttctccgggagattaccgaga  11352100                             <---------ARR11(3)                                     ---------->DOF2                             --------->ARR11(3)              >>>>>>>>>ARR2     --------->WOX13(1)                             <---------GLK1(2)   --------->ICU4   --------->ETT(2)--------->YAB1       ----------->GT1 --------------------->WRI1<---------ATHB51 <---------ZAT18<---------ATHB12 ---ZmHOX2a(2)   --------->DAG2       ------>NtERF2         --------->ATHB12--------->ANAC58       -- -----ARR11(3) ---------->DOF2       --------->DEAR3(1)    <---------YAB1   --------->ANAC58 <-------   tcagcgagagagtaaacaaaagggtacttgagattttcgacgacgtttgcgattatgggttttgattgtggacatttgaagcaatcaaaaggagggatag  11352200                                                                                           <------ZmHOX2a(1)                                                                                          <----------ID1                                                                                       ---------->DOF2                                                           >>>>>>>>>TBF1          --------->MYB52(1)                                                        >>>>>>>>>TBF1           <---------ARR11(3) ------->ALFIN1     --------->CCA1(2)             <---------HSFB2a(2)           --------->ARR11(3) --ARR14(2)      ----------->ARR10          <------ZmHOX2a(1)               <------ZmHOX2a(1)   ggtatggggaattgatggagagatttggattggagtattggagagaggagttagagaagaagaagaagagagaagagaggaagataatggaaaggacaag  11352300                                                                       --------->ARR11(3)                                                                       <---------AGP1                                                 <-----------RAV1(2)   ------->TEIL                                                 <---------HSFB2a(2)   --------->ARR14(2)                                                 --------->HSFB2a(2)   <---------ARR14(2)                                              <-----------GT1 --------->AtLEC2                                          <----------DOF2--------->ANAC58       --------->ALFIN1                                    <---------ANAC58     --------->ANAC46       <-----------RAV1(1)                       ---------->DOF2  ---------->ID1   --------->ANAC58------>ZmHOX2a(2)<---------GLK1(2)             <----------DOF2        <---------ANAC58   --------->ATERF1(1)<---------HSFB2a(2)    ----   aagtgagattagtgtctttggtgataaaagtttttggttcttgtcttttttccaggcgctcgccatggaaatggatctagatgtgttgttcagagtcttg  11352400                                                           --------->ALFIN1                                                         <---------ANAC46                                                         <---------ANAC58                                                         <---------ANAC58                                                        <---------MYB46(3)                                                     ------>ZmHOX2a(2)                                                    <------ZmHOX2a(2)                                                   --------->ARR11(3)             ------>MYB83                                <---------LBD16    --------->AGP1                 ------>MYB46(1)                                --------->LBD16    <---------ARR14(3)           <---------MYB59                              ------>ZmHOX2a(2)    --------->ARR14(3)           *TSS--------------->AGL15                              =======================HOX2a_HOX2a              --------->SPL7                            --------->ARR11(3)     <---------ARR11(3)       <---------SPL7                            <---------ARR11(3)     <---------ARR14(2)      <---------ANAC58              <----------DOF2--------->CCA1(2)     --------->ARR14(2)      <---------ANAC58             <---------ANAC58========================HOX2a_HOX2a          <-------TEIL          <--------P        --------->ARR14(2)    --------->GLK1(1)       <---------------AtSPL3        <---------ANAC58    <---------ARR14(2)    <---------GLK1(1)       --------------->AtSPL3        <---------ANAC58    --------->AGP1       ----------->ARR10      <---------ARR14(2)       --------->MYB59      <---------AGP1    <------ZmHOX2a(1) ---------->DOF2--------->DEAR3(2)  <---------YAB1           <---------CCA1(2)  ==============HOX2a_HOX2a --------->ARR14(2) ------->GT1 <---------ANAC58<------ZmHOX2a(2)=============HOX2a_HOX2a  <---------GLK1(2)---------->DOF2   agttaaaattgggtagcttttgaaatttcagatctggggaaacaagaaggagagatcttgggtgggaaaagatggattcgtaccgacttgttaaagaaaa  11352500                 <---------TOE2(2)                 <---------TOE1(2)                --------->LBD16               <---------TOE1(1)               <---------TOE2(1)              ------>ZmHOX2a(2)             <------ZmHOX2a(2)             --------->CCA1(2)             --------->ARR14(1)            --------->ARR14(2)            <---------ARR11(3)            --------->ARR11(3)                                                               --------            <---------ARR14(2)                                                               <-------            --------->ARR11(1)                                                            <---------ATHB12           <---------GLK1(1)        --------->At4g35610                       <---------AHL20(2)           <---------HSFB2a(1)      <---------ZAT2                  --------->ICU4      --------->WOX13(1)          ----------->ARR10         <---------At4g35610      --------->ALFIN1 --------->AHL20(2)     ---------->DOF2   ------------>CBF                  ---------->DOF2--------->HSFB2a(2)--------->AHL20(2)   acaaggagaaagaagatccgaggttagcaatttcagtgagcagagagacacaaactgacaaaagtgtgtcattactagaattaatgacaccaattaagta  11352600                                                                                                  <--                                                                                                <----                                                                                                -----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                           <---------AHL20(2)                                                                                           <---------YAB1                                                                                          --------->AHL20(1)                                                                                          <---------AHL20(1)                                 --------->AHL20(1)              <-----------GT1          --------->AHL20(2)                                 <---------AHL20(1)            --------->YAB1             <---------AHL20(2)                                 --------->AHL20(2)        --------->AHL20(1)       <---------ANAC55(2)     <---------AHL20(2)          <---------AHL20(2)        --------->AHL20(2)       ----------->GT1 --->GT1                  <-----------GT1  <----------DOF2 <---------AHL20(2)       --------->ANAC55(2) --ANAC55(2)       <-------TEIL --------->AHL20(2)        --------->AHL20(2) --------->YAB1--------->AHL20(2)   aaactatttattctcacaaaattcatttctacaattttatttatacttttaaaactaaaaattaattatacgaattcaaaaataacatgtaatataattt  11352700        --------->YAB1 -------YAB1 -----AHL20(2) ---->AHL20(2)                     <----------DOF2                                     >>>>>>>>>>WRKY63 --->AHL20(1)                   --------->ARR11(3)                        --------->ARR11(3) ----AHL20(1)                   <---------ARR11(3)                        --------->GLK1(2) ----AHL20(2)       --------->AHL20(2)    <---------AHL20(2)              <---------ARR11(3) --->AHL20(2)       <---------AHL20(2)----------->GT1    --------->DEAR3(1)   ----------->GT1--------   atttttgctatcatcagatttataaattttgacaaatcttttgttaaattgaaacctcgccgaagagaattttaaaaatctagtgaatttgactatcaaa  11352800                                             ----------->GT1      <---------AHL20(2)                   ------>ZmHOX2a(2)     --------->YAB1                       <------ZmHOX2a(2)                     --------->YAB1    <---------YAB1             <---------AHL20(1)                               <-----------GT1   <---------AHL20(1)          <---------ARR11(3)                              <---------YAB1   <---------AHL20(2)    --------->YAB1   --------->CCA1(2)                  --------->YAB1   --------->AHL20(2)    <-----------GT1 --------->ARR11(3)              <---------YAB1  <---------AHL20(2)   --------->AHL20(1) --------->YAB1     --------->AGP1                <-----------GT1<---------ARR11(3)  --------->YAB1   <---------ZAT6 <---------AHL20(2)            <---------AHL20(2)    <---------AHL20(1) <---------YAB1  <---------At5g28300     <---------ARR11(3)    <---------AHL20(2)     --------->AHL20(1) ->YAB1      <----------DOF2   --------->AHL20(1)        <---------AHL20(2) <---------YAB1          <   actattataatattccttttactgttataacaatattttttgagatctagtgaatcgattttttttttattttttactattataacaatattttttgaga  11352900                              <---------AHL20(2)                              --------->AHL20(2)                             --------->AHL20(2)                          <---------AHL20(2)                         <---------AHL20(1)                         <---------AHL20(2)                  <---------AHL20(2)                         --------->AHL20(2)                 <---------AHL20(1)                      <---------ICU4         <---------AHL20(2)                     --------->AHL20(2)      --------->AHL20(2)                     <---------ATHB51       --------->AHL20(2)    --------->ATHB12                 <---------YAB1          --------->AHL20(2) --------->AHL20(1)               --------->YAB1<---------AHL20(2)      <---------DAG2            <----------DOF2  <---------AHL20(1)   <-----------GT1<---------AHL20(2)              <---      <-----------GT1<---------AHL20(2)  --------->ICU4  --------->AHL20(2)                   <------ ---------MYB52(1)   --------->ICU4 <---------TOE2(3)<----------DOF2<---------WOX13(1)  --------->ICU4   ccgtcaattttcttcttttataaataattaatttttttaagaaatatttaattcactttttatatatttgattgaacacatatacttgaaaagattaaac  11353000  Previous    Next  AGI:  At2g26680.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO65660.1); contains InterPro domain Methyltransferase FkbM (InterPro:IPR006342) Range:  from: 11350879    to: 11352480    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version