Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <------ZmHOX2a(2)       <---------AHL20(2)  ------>ZmHOX2a(1)    ----------->GT1    --------->ARR14(2)  ---------->DOF2      <---------ARR14(2) ------>DOF2 <---------ANAC58              --------->YAB1               ----------->GT1 ->ZmHOX2a(1)<---------ANAC58            --------->GLK1(2)      --------->AHL20(1)                  - >ARR11(3) <---------AHL20(2)       ---------->DOF2             <---------AHL20(1)                <-- -ARR11(3) --------->ARR11(3) <---------YAB1   ----------->GT1 --------->AHL20(2)--------->YAB1   <--   aaagtaaagttaatttcttgtttccgatcctcataaatgaaagaatcagaagttatatagttgaaatatatatcaagttaaaatggtaatcgtcttctta  11343300                                                                                       --------->TOE2(3)                                                                              --------->HSFB2a(1)                                                                              --------->GLK1(1)                                                                             ------->TEIL                                                                             <---------ARR14(2)                                                                             --------->GLK1(2)                                                                             --------->ARR14(2)                                                                      <-------TEIL     --------->TOE1(3)           ----------->GT1                                           --------->CCA1(2)--------->At4g35610 ---------->HVH21                                                <------ZmHOX2a(1) ------>ZmHOX2a(1) -------ANAC58    --------->ANAC58    ----------->GT1      --------->YAB1   <---------ARR14(1) -------ANAC58    --------->ANAC58---------->DOF2         <---------YAB1    <---------GLK1(2)   gcttgacatggaagagaaacaagaaaaacaaaaaacaaaagagtgaaacctgtatttgtgatcataaggagatacaacgaatctcctaagcttaactcgt  11343400                               --------->HSFB2a(2)                               <---------HSFB2a(2)                 <---------At4g35610                     ----------->GT1                            ---------->DOF2                <-----                    <---------TOE2(3)                        <---------HSFB2a(2)               ------                    <---------TOE1(3)                        --------->HSFB2a(2)             <-------   cgattacttcttgcaccaagtgaaggtaaaattccagtagaaagactaaaatgactactctctctcgaaagctgttcaatctcatcttggacttgtccgc  11343500                      --------->DREB2C(2)                      ----------->HVH21         <----------DOF2                      --------->At1g77200     ------>ZmHOX2a(1)                      --------->DEAR3(1) <---------ANAC58  ---------->DOF2    --------->DEAR3(2)  <---------ANAC58            ---------->ID1 -NtERF2        --------->YAB1      <---------ANAC58        <----------DOF2           ---------->DOF2 --->LBD16   ------>ZmHOX2a(1)      <---------ANAC58  <---------MYB46(3)<----------DOF2    ---------- --LBD16 <---------ALFIN1     <------------------------ANAC81 <------------------------ANAC81    XXXX   ataacaaagcccctcctctcatcaccgacgtttttttttcttggcttcctctttgatggttccttttttttgttcttttggtttcggcaaaagaggcaaa  11343600                    --------->ATHB12                  <----------DOF2                                 <----------DOF2    <---------At4g35610                                        <---------ARR11(3)    --------->At4g35610                   <-----------GT1      --------->ARR11(3)    *TSS ->GT1          ---------->ID1     <---------AHL20(2)  <---------YAB1        <----------DOF2 XXXXXXXXXXXXXXXX>MIR852     <-----------GT1     <---------MYB46(3)       <-----------GT1   ataagcagcttaactcttggctttattggtttcacatttttttttcactcgttgttgatgagtgagaccttttttttttctttataacaaaaaaaaactc  11343700                                                                                                   <-                                                                                                  <--                       <---------ANAC58                                                         -----                       <---------ANAC46                                                         <----                       <---------ANAC58                                                         <----                       --------->ALFIN1                                                       <------MYB46(1)                     --------->ALFIN1                                                         <------                 <---------ANAC46                                                           =========                 <---------ANAC58                                                           <--------P                 <---------ANAC58                           --------->ANAC46              --------->ATHB12                 --------->ANAC55(2)                        --------->ANAC58              <---------MYB46(3)                 <---------ANAC55(2)                        --------->ANAC58              --------->MYB55(2)                 <---------ANAC55(1)           ------>ZmHOX2a(2)                    <---------ALFIN1                <---------LBD16               <------ZmHOX2a(2)                   ----------->RAV1(1)               <-----------GT1               <---------ARR14(2)                 <------NtERF2 <------MYB83          <----------DOF2   <-----------HVH21--------->ARR14(2)     <---------TOE2(3)    --------->ALFIN1   --------->MYB52(2)<---------ANAC46   <----------DOF2<----------DOF2         --------->ANAC46 -----   ttggctagttggctttattacgggtgtgtgtgtcatttctgactttggatcccttcactttcaaggaattaagttttctctcggcaacacagtggttggc  11343800       --------->TGA1a       --------->O2       --------->ANAC55(2)       <---------O2       --------->ANAC46   <-----------HVH21                                                   <---------ICU4  <----------DOF2                                                     <---------YAB1  ===============bZIP_DOF                                          <---------YAB1 --------ALFIN1                                                   <---------ARR11(3) <---------ICU4 ----NtERF2                                                       --------->ARR11(3) -------->HAHB4 ---->PCF5                             <---------ANAC58          --------->CCA1(1)   <--------ATHB1 -----TCP15(1)                         <---------ANAC58          --------->RVE1(1)   --------->ATHB51 -----TCP20                           <------NtERF2          <---------AHL20(2)     <---------ATHB51 ---ATERF1(1)                       <---------RAP2.6(2)      --------->AHL20(1)     <---------AHL20(2) ================MYC_MYB       --------->YAB1                --------->AHL20(2)     --------->AHL20(2) ---->PCF2                  --------->TOE2(3)           --------->AHL20(2)        --------->YAB1   cccactttcacgtcttaacccttactgtagcattaatggtggcttctccatttcaagataaaataaaatatcattcttgctcataaataattgtattaac  11343900                               >>>>>>>>>>WRKY11                            -------->ATHB1                               >>>>>>>>>>WRKY26                            <--------HAHB4                               >>>>>>>>>>WRKY38                            --------->YAB1                               >>>>>>>>>>WRKY43                            <---------ICU4                               <---------WRKY18(1)                        --------->ICU4   <---------AHL20(2)                               >>>>>>>>>>WRKY6                            <---------ATHB12 --------->AHL20(2)                              --------->WRKY12              ------>ZmHOX2a(2)       <-----------GT1                              --------->WRKY45            <---------ARR11(3)    <---------YAB1   ----------->GT1            --------->WRKY38(1)         --------->ARR11(3) <---------YAB1--------->AHL20(1)  >>>>>>>>>TBF1        <------ZmHOX2a(1)      --------->ANAC46          --------->WOX13(1) <---------AHL20(1)   agaagaagaaaaattagaccgaagaggaagagttgaccaaaaatttatacatcagagcatgatctcaagtttttcaatcattatacttactattttattg  11344000                                                                                    ------>ZmHOX2a(2)                                                                              --------->ANAC55(2)                                                                             <---------TOE2(3)                                                                        <---------AHL20(1)                                                                        --------->AHL20(1)                                                                        --------->AHL20(2)                  ----------->GT1                --------->ANAC58     <---------AHL20(1)                  <----------ID1                 --------->ANAC58     --------->AHL20(1)     <-------               ---------->DOF2               <------ZmHOX2a(1)        <---------AHL20(2)--------->YAB1               --------->MYB52(1)       <---------REM1(1)          --------->AHL20(2)  <------ZmHOX2a(2)   tttgtttgacttctaactaaaggaaaaaaaaaacacatatagatgtaggacacgacttaaaacttgttttaaaatattttaggtgatcgatcatataaca  11344100                                              <---------------AGL15                                              --------------->AGL15                                             <-----------------AG  <---------ANAC58                                             <-----------------AGL2<---------ANAC58                                          <---------WOX13(1)   <---------ANAC58                                        --------->ATHB12       <---------ANAC58                                       <---------YAB1         <------MYB46(1)               ---------                                   <---------ARR11(3)         <------MYB83                 ----------                                   --------->ARR11(3)         <---------MYB46(3)          <---------TOE2(3)                        --------->CCA1(2)<---------ANAC58   <---------WOX13(1)         --------->ICU4                       <---------ARR14(2)<---------ANAC58 --------->ATHB12             <---------ATHB12 ----GT1       <---------SPL7    ----------->ARR10       <---------YAB1       ---------->DOF2       <   ttcttgggctcatttgtggtatggagatttgaagtgagatattgattgcaacttatggtatgattggttgcatacttgcataaagagcaataaatgttaa  11344200  Previous    Next  AGI:  At2g26650.1    Description:  AKT1 (ARABIDOPSIS K TRANSPORTER 1); cyclic nucleotide binding / inward rectifier potassium channel. Identical to Potassium channel AKT1 (AKT1) [Arabidopsis Thaliana] (GB:Q38998;GB:Q38797;GB:Q84MA7); similar to SPIK (SHAKER POLLEN INWARD K+ CHANNEL), cyclic nucleotide binding / inward rectifier potassium channel/ potassium channel [Arabidopsis thaliana] (TAIR:AT2G25600.1); similar to AKT5 (Arabidopsis K+ transporter 5), cyclic nucleotide binding / inward rectifier potassium channel [Arabidopsis thaliana] (TAIR:AT4G32500.1); similar to potassium channel [Solanum lycopersicum] (GB:CAA65254.1); similar to potassium channel [Solanum tuberosum] (GB Range:  from: 11338928    to: 11343685    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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