Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               ---------->DOF2        ----------->GT1        --------->YAB1       ----------->GT1                                              <---------At4g35610      <---------WOX13(1)                                        <---------YAB1 -------->YAB1--------->DAG2                       ----------->GT1  --------->At4g35610    ---------- ----->WOX13(1)     ---------->DOF2        <----------ID1    <---------YAB1               ------->TEIL   aatcagagattgataaaaagttcaaagcccagaaacaaaaacaaaactacaaattgtgaaactcttattaatctgacaaaacaaaaactaagtacctggt  11336500                                                                                             <------MYB83                                                                                             <-------                                                                                            <--------                                                                                           <--------P                                                                                          <---------ANAC46                                                                                          <---------ANAC58                                                                                          <---------ANAC58                                                                                --------->ANAC58                                                                                --------->ANAC58    -                                                                      <---------AHL20(2)  <-------GAMYB                                                                      --------->AHL20(2) <------MYB46(1)                   ----------->RAV1(1)                             --------->YAB1        <------MYB83        <---------ARR14(2)                   <---------At4g35610  <---------AHL20(2)   --------->ALFIN1        --------->ARR14(2)                   --------->At4g35610 --------->AHL20(2)---------->DOF2  < ->RAV1(2)       --------->At4g35610 <---------ALFIN1     <----------DOF2     ---------->DOF2<------MYB46(1)   ctctagatcgaattcgagcagcaacaagagttcgaagccccaatctcagaagacagaacccttttcatataataaatcacaaaagcaaagtgggttggtt  11336600        <------MYB46(1)        <------MYB83                   ----------->HVH21        <---------MYB46(3)            <---------WOX13(1)      <---------MYB52(1)             <---------ANAC58     <-------GAMYB                  <------MYB83     >>>>>>>>>TAC1                  <------MYB46(1)                               --------->HSFB2a(2) ------------>AtMYB77               <---------MYB46(3)<------MYB83                <---------HSFB2a(2) --MYB46(3)                       <---------WOX13(1)  <---------MYB46(3)  <-------TEIL -------------- -AtMYB61                       --------->ATHB12 <---------YAB1          --------->GLK1(2) ---------->HVH21              <---------YAB1 <---------YAB1      --------->CCA1(2)  <---------AGP1<- ---------ZAT6        <-----------GT1<---------ANAC58 <------MYB46(1)    --------->CCA1(2)       <---   tagtgacagttggtttgattcgatttactagatttgattggttgacacattatagttggttcaattcgatatgagattcgaattctagacctgtaccatt  11336700                                                                           <---------AHL20(2)                                                                         <---------CCA1(1)                                                                         <---------RVE1(1)                                                                        <---------GLK1(2)                                                                        <---------ARR11(3)    <------                                                                        --------->ARR11(3)   --------                                                                  --------->YAB1             <-------                                                               <---------ICU4            --------->LBD16                                                               <--------ATHB1          ==============                                                               --------->YAB1          ------>ZmHOX2a(2)                                                               --------->ATHB12       --------->CCA1(2)                                                               --------->ATHB51       ===============                                                               <------------ATHB5     <------ZmHOX2a(2)                                                               <--------HAHB4        --------->ARR14(2)      ------>ZmHOX2a(1)                                       --------->AHL20(2)     <---------AGP1 < ->AtSPL8                                                     <---------ATHB51       <---------ARR14(2) --------YAB1               <---------MYB52(1)                --------->ICU4         <---------ARR11(3) --------GT1          ---------->DOF2                         <---------ATHB12      <---------GLK1(1)   tactattcctctagatttagaccataaaccggcagttttcattttcaaaactcgaaattgatcaataattagaagattttttttgtagatccgaataaaa  11336800                                                                        ----------->RAV1(1)         <---------AHL20(2)                                            ----------->HVH21         <---------AHL20(1)                                          ------>ZmHOX2a(1)         --------->AHL20(1)                                         --------->TOE1(2)       <---------YAB1                                              ----------->RAV1(2)      --------->AHL20(2)                                           =================RAV  <------ZmHOX2a(1)                                             <---------At4g35610 ---AHL20(2)                                                    <---------ZAT2                ------- ->AHL20(2)                                              --------->MYB52(1)            -------------- --AHL20(2)  ----------->GT1           --------->HSFB2a(2)      --------->At4g35610  ----------->HVH21 ========HOX2a_HOX2a              <---------ANAC58       <---------DOF5.7(2)       ----------->GT1 ========HOX2a_HOX2a              <---------ANAC58     --------->DOF5.7(2)       <---------ZAT14<---- ---------TOE2(3)     --------->TOE2(3)<---------HSFB2a(2) --------->ANAC46      --------->ZAT14-----   ttgaggaatattatattgtttatttcttaacctctagcgttctaaaaattcaaaacagttaacgacagctcctgcgacaactgtgcagtgacaaaaaaaa  11336900                              <----------DOF2                      <-----------GT1                                                    <--------P                    <------------CBF                                                   ----------->GT1                   --------->ATHB51                                                   <---------TOE1(3)                   <---------ICU4                                     --------->YAB1  <---------TOE2(3)                   --------->ATHB12                             --------->ANAC58      --------->MYB59        ----------->GT1    <---------ALFIN1                     --------->ANAC58  --------->ANAC58    ---------->DOF2-------->ATHB1                             <---------MYB52(1)  --------->ANAC58 --->DOF2         --------->AHL20(2)                         --------->LBD16  <---------HSFB2a(2) ---------->ANAC81<---------ATHB51                          --------->ANAC46  --------->HSFB2a(2) ------ID1        --------->ICU4                           <---------LBD16--------->GLK1(1) ------>GT1       <---------AHL20(2)            *TSS  --------->ARR14(2)  <---------GLK1(1)--------->MYB52(2)   gaaaaaaaaagagttaacaaattattgcccctctttctctatctctcttcttctcggtttctccgtaagcattcagagttctgcaagtaaggttagtctc  11337000                                                                 <---------ARR11(3)                                                           <---------ARR11(1)                                                           --------->GLK1(2)                                                           <-----------ARR10                                                           <---------ARR14(2)                       --------->TOE2(3)                   ------->TEIL               ------>ZmHOX2a(1)                           --------->ARR14(2)              --------->TOE2(3)                 ----------->GT1  --------->ARR11(3)  --------->ARR14(2)         <----------DOF2                    <---------YAB1<---------ARR14(1)<-------TEIL       <-----   tgtttctgtttcttttcctcattaatctaaatgcttcaaaaacaacatgatagtgaaatcgaatctaggtcttgtaaatgcatattgaattcgctctctt  11337100                   <---------YAB1                 --------->YAB1                                                             <--------                <---------YAB1                 ---------->DOF2           <---------REM1(1) --------->At5g28300         <---------ARR11(3)                 <-----------HVH21           ------->TEIL      -----------         --------->ARR11(3)               ------>ZmHOX2a(2)     --------->ANAC58       ------------>MYB.PH3(1) -----DOF2   <---------YAB1              <---------At4g35610    --------->ANAC58  ---------->DOF2   tccatttttaaaatcttgattataatctagtaattgaattttgatctgtcaaagcagagaagaaggaagctatggatgtagagcaaaagaaaccgttaat  11337200                                                                                               <-----                                                                                         <---------HSFB2a(1)                                                                                         --------->HSFB2a(1)                        --------->GLK1(1)                                               -------------                    <---------MYB59                                                     <---------KAN4(2)         <------ZmHOX2a(2)                                               <---------DAG2 -------------        <---------ARR14(2)                                               --------->TOE2(3)    <------  --------->YAB1  -------->P                                      <---------YAB1        <------------ <---------ATHB12 ------->TEIL                               <------MYB46(1)  --------->ZAT6------->TEIL -MYB52(1)------>ZmHOX2a(2)                                  <------MYB83--------->TOE1(3) <--------- >GT1   --------->ARR14(2)                 --------->TOE1(3) <---------MYB46(3)  <---------ATHB12   cgaatcatcagatcgtaatctacctgatttcaaaaaatcagtgaagcttaaatatgtgaagcttggttaccattaccttatcactcatggaatgtacctt  11337300                                                         ------>ZmHOX2a(2) ------>ZmHOX2a(1)                                     <---------ARR14(2) -----DOF2                                             --------->ARR14(2)                   <-------- -->AtSPL3                                             <---------ARR11(3)                 --------->YAB1 -->AtSPL8                               <----------DOF2<------ZmHOX2a(2)                 --------->TOE2(3) ---DAG2                          --------->GLK1(1)    --------->ARR11(3)            --------->ZAT14 ---AtSPL3                 <---------ZAT14       ----------->HVH21   --------->HSFB2a(2) <<<<<<<<<ARR2 --GT1    <---------ICU4   --------->ZAT14      <-----------HVH21    <---------HSFB2a(2) <<<<<<<<<ARR1   ttcctctccccattagtacttgtaatcgctgcacagatttcaactttctctgtcaccgatcttcgtagcctctgggagcatcttcagtacaatcttatct  11337400  Previous    Next  AGI:  At2g26640.1    Description:  beta-ketoacyl-CoA synthase, putative. Identical to 3-ketoacyl-CoA synthase 11 (KCS11) [Arabidopsis Thaliana] (GB:O48780); similar to beta-ketoacyl-CoA synthase, putative [Arabidopsis thaliana] (TAIR:AT5G43760.1); similar to beta-ketoacyl-CoA synthase, putative [Arabidopsis thaliana] (TAIR:AT1G04220.1); similar to very-long-chain fatty acid condensing enzyme, putative [Arabidopsis thaliana] (TAIR:AT1G19440.1); similar to CM0216.300.nc [Lotus japonicus] (GB:BAF98214.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67313.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44150.1); contains InterPro domain Very-long-chain Range:  from: 11336948    to: 11338936    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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