Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     --------->AHL20(2)          <---------YAB1                     <---------AHL20(2)                              --------        <-----------GT1                      --------->AHL20(2)                              <-------      --------->YAB1                     --------->AHL20(2)     <---------AHL20(2)          ---------   <-----------GT1                    --------->TOE1(3)       --------->CCA1(2)             <--------  <---------AHL20(2)                  --------->TOE2(3)      <---------ARR11(3)             --------- --------->AHL20(2)  <---------AHL20(2)------>ZmHOX2a(1)     --------->ARR11(3)             <--------   tgatttaatcttactattctgaattttttggtctaaaattccttaaattaaaaaaaaatagaagatttaaacgaactaaaacaattgatacaaatttatt  11305800                                     <---------MYB46(3)                                    <---------ANAC46                                  --------->ARR14(2)                                --------->LBD16                              <---------LBD16     <-----------GT1        <---------ARR14(2)                     <---------PCF2   --------->AHL20(2)       --------->ARR14(2)                    ----------->HVH21 ->AHL20(2)             <------ZmHOX2a(2)                     <------MYB46(1) --AHL20(2)            --------->ARR11(3)                     <------MYB83 >AHL20(2)             <---------ARR11(3)  ----------->GT1 <---------ANAC58 -AHL20(2)         ---------->DOF2<---------ARR14(2)       <---------ANAC46          ------>NtERF2 >AHL20(1)      --------->TOE2(3) <-----------HVH21        <---------AtLEC2    <----------DOF2 -AHL20(1)   <-----------GT1--------->GLK1(2) ------->TEIL <---------ANAC58 <---------ALFIN1   ttctattaaacaatattacattaaagatcgaatccgggtcgggtaatgtaactcaaaacttgcttggtgcgaccctctccactttgccagcctcattcat  11305900                                                                         --------->WRKY38(1)                                                              <---------DAG2                                                   <------MYB83          --------->WRKY12                                                   ----------->GT1    <---------ANAC58       --------                                                   <------MYB46(1)    <---------ANAC58       --------                                        --------->WRKY18(1)   <----------DOF2   <---------ATHB12      --------->AHL20(2)               <-----------HVH21<-----------GT1  --------->WRKY45    --------    --------->YAB1        <-----------RAV1(1)     --------->MYB59     <---------ANAC46     ----------   ctctaaaaataaacaaaaaccagtttttttgttgttgttcaggtcaagtagtttggtttaactactttttatacgtggaccaatgaaacaccaagaagcc  11306000                                                              --------->AHL20(1)                                                              --------->AHL20(2)                                                         --------->AHL20(2)                                                   ----------->GT1                         ----------    <-----------GT1                                <----------ID1                        <---------YAB1 ->ANAC58                                         ----------->GT1            --------->MYB52(1) ->ANAC58   --------->AHL20(2)                    ------------------------>ANAC81 ------>MYB46(1) ->ANAC46  <---------YAB1                       ---------->DOF2   --------->AHL20(2)  --------->ICU4 >DOF2 <----------DOF2        ------------------------>ANAC81 <---------AHL20(2)  ------>MYB83   actaattttctttattaaaaactaaaactgaataacaaaataactaaaaaaaaaggaaaaaaaataaaataaacaaacaaaaccgaacattatgaaagag  11306100                                                                    <---------MYB52(1)                                                             ------>NtERF2                                                           ----------->HVH21                                                          --------->LBD16                                                          ------>NtERF2                                                         --------->ANAC46                          --                                               --------->ATHB12 <---------ZAT14                    <-                                              <---------YAB1------>NtERF2                          <-        --------->At4g35610                   --------->ICU4<---------ATERF1(1)                    -- >DOF2<-----------RAV1(2)                  <-------TEIL <---------LBD16    <----------DOF2      -----   agagaatgccagatggatgatgaagatgagccgatgagagatagcttcatgatttgtctccgcgaccgcagttatctctttctaatttctgtctgaaata  11306200                                       <---------LBD16     <-----------GT1          --------->YAB1                                                ---------   <---------AHL20(2)         <---------ICU4                                               --------->RAP2.6(3)   --------->AHL20(2)        <---------YAB1                                              <-----------RAV1(1) ------->AHL20(1)          --------->YAB1--------->LBD16                          <----------DOF2 --------AHL20(1)         <---------ATHB12<---------MYB52(1)                    <---------At4g35610 --------AHL20(2)         ===================HOX2a_HOX2a                    <---------REM1(1) <------NtERF2 ------->AHL20(2)     *TSS<------ZmHOX2a(2)                       ------->TEIL ------->TEIL---------- ---->YAB1          --------->TOE2(2) ------>ZmHOX2a(1)          <---------CCA1(2)<---------DAG2   ataaattaaacttcttctactacctccgatcatcataatcctccggtaagacttctcttctcttcttgaatcttcttgatgcagcttttttttgtcggca  11306300                                  --------->ZAT2                                                    -                                  <---------ZAT2                                                    <                                  --------->At4g35610                                               -                                  <---------At4g35610                                              <-   <----------DOF2              <-----------RAV1(2)         <---------LBD16                      ---- >ETT(1)             <---------AHL20(2)          <---------GLK1(1)              <----------DOF2 ----- >ID1          --------->YAB1<-----------GT1     --------->GLK1(1)  <----------DOF2         <------ZmHOX2a(1)   tacaacttttgtatttttcatattttttttttctccagctgataaactcagaattcttgaaattcggaaacttttcatttttctttgaattgtaggaaat  11306400                                                       <---------ICU4                                                       <---------AHL20(2)                                                       --------->AHL20(2) --------->ARR14(2)                                                       --------->ATHB51 --------->LBD16                                          <---------------AGL15       ----------------->AG                                          --------->HSFB2a(2)    --------->TGA1a                                          <---------HSFB2a(2)    <---------TGA1a                                          ------>ZmHOX2a(1)      --------->O2                                          --------->LBD16        ================================bZIP_DOF -------->YAB1                           ===============================================MADS_MADS ---------ICU4                           <-----------------AG    <---------O2                   <---- -------->ATHB12                         <---------LBD16   <-----------GT1<---------ARR14(2)    ----- --------YAB1                       <---------AHL20(2)--------->ICU4<---------ARR14(2)          ----- ----->YAB1   <-----------GT1      --------->AHL20(2) <---------YAB1--------->ARR14(2)         <----- ---->ICU4   <-----------GT1 --------->ZAT6      ----------->GT1 --------->ANAC55(2)  ---------->DOF2   tatcattgttcgtatttatcttcttaaaaaaacactattaaatcctggaattggtaattatttactcacgtttccgaatttgtttacacaaagatgaaaa  11306500         --------->ATHB12        <---------YAB1      ------>ZmHOX2a(2)    <---------ARR11(3)    --------->ARR11(3)                                                   <---------ARR11(3) -----ARR14(2)                                                           --------->ARR11(3) ---->GLK1(2)      <---------YAB1                     ----------->GT1---------->DOF2        <-------- ---->ARR14(2)<---------TOE2(3)                 --------->ATHB12   <---------YAB1        --------->AHL20(2) ----GLK1(1) ---------->DOF2            --------->ARR14(2)       --------->YAB1      <---------AHL20(2)   tccgatgatcttgattaaagtatgtttgattcttgtataccatatttgtttgattagagtaatttgatcatcaaagatgttttgtattcaattttttctc  11306600                                                                                         --------->ICU4                                <-----------RAV1(2)                      <---------TOE2(3)      -----                             ----------->HVH21                    --------->At4g35610   <---------TOE2(3)                          <---------TOE2(3)                       <---------At4g35610 --------->ICU4     <----------DOF2      <---------TOE1(3)                <---------REM1(1)        --------->YAB1 ---GT1                  <-----------RAV1(2) <------ZmHOX2a(1)   --------->GLK1(2) <---------ZAT6   aattagtctttatgttttgtagcaatttcaggttacaggggaatggaggacttaaaaactgttgaagcatctgataatgttgttagtgataatgttgaga  11306700  Previous    Next  AGI:  At2g26570.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G33390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61337.1); contains InterPro domain Protein of unknown function DUF827, plant (InterPro:IPR008545) Range:  from: 11306222    to: 11309269    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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