Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            --------->YAB1                                       ---------->DOF2           ------>ZmHOX2a(1)      --------->At4g35610       --------->ARR14(2)     ------->GAMYB       <---------ARR14(2)    --------->ANAC46                  ------>ZmHOX2a(1)              <------     --------->MYB59       --------->MYB52(1)  --------->CCA1(2)       <-----------GT1   <---------GLK1(2) ---ZmHOX2a(2)         XXXXXXXXXXXXXXXXXXXX>MIR159A          ----------->RAV1(2)---------->DOF2   tcgaaatcaggtcctcgcgcatgttgaatcaacggaagctctaaagatgatatgccatttttctcctgcaatttcaccatagtaaagaacagaattttga  11297000                                                                     <---------WOX13(1)                                                              --------->ATHB12                         <-----------ARR10         ---------->DOF2<---------YAB1                    -                        <---------CCA1(2)         --------->AtMYB61 >>>>>>>>>ARR2        <---------ZAT6                    ------>ZmHOX2a(2)       <-------TEIL     <---------YAB1            <---------ANAC46                  <---------ARR11(3) --------->At5g28300   --------->YAB1 <---------ANAC58        --- ---YAB1        <---------YAB1    <---------At5g28300   <----------DOF2   <---------ANAC58       ----   ataacttcagaaaatttcatgatcccaaatctaattcactgtgaaatgcataccaaagctttgatgatttgattgttcttgcctcgttctcgtgttacga  11297100       <---------ARR14(2)       <------ZmHOX2a(1)      <------ZmHOX2a(1)     ------->GAMYB ---------->RAV1(2)      --------->MYB52(1)              --------->ARR11(3)      <------ZmHOX2a(1) --->NtERF2            <---------MYB52(2)        <---------SPL7           <---------LBD16 ----->DEAR3(1)    <---------At4g35610        --------->CCA1(2)     ----------------->AGL1   cgacctgaggaatcgaattggagctactaacggaggaagaagatgaagagacggacgaagaaattgaatttcgaattggggaaggagaagcgaaaactgg  11297200                                                                                           --------->YAB1                                                                                           -------->HAHB4                                                                                           <---------ICU4                                                               --------->CCA1(2)          --------->ICU4              <---------GLK1(1)                           ---------->DOF2       ---------->DOF2              --------->CCA1(2)                      <-------GAMYB      <---------ZAT14   <---------ATHB51             <---------ARR14(2)                     <---------MYB46(3)  --------->ZAT14 --------->YAB1             --------->ARR14(2)    >>>>>>>>>TBF1   <---------TOE2(3) ---------->DOF2 ----------->GT1   tttgctcagagattggatatgtgaagaatgaaatgaagaagaagacgataatggaggttgaaaagataagatagagcagtgagaaaggagtaataatgcc  11297300                                            --------->LBD16                                            ----------->GT1                                           --------->DEAR3(1)                                           <---------DEAR3(1)                                          <------NtERF2                                        --------->DEAR3(1)                                       --------->ATERF1(1)                                       <---------ABI4(2)                                      <---------ATERF1(1)                       <---------AtMYB61                                  <---------ANAC55(2)                          <---------MYB52(1)                                  --------->ANAC58                            --------->LBD16                                  --------->ANAC55(1)                        <---------ATERF1(2)                                  --------->ANAC46                           --------->ATERF1(2)                                  --------->ANAC55(2)                        <---------DREB2C(2)                                  --------->ANAC58                           <---------DEAR3(1)                                 <---------LBD16                   <----------DOF2     --------->DAG2            ----------->HVH21                   <---------DAG2<---------MYB46(3)    ---------->DOF2    --------->ARR11(3) <---------LBD16 --------->YAB1    <---------LBD16        --   attagaaaaagttccaagatggagagatgttgtctcacggaagcgccggtgaaaatggaatcgtagtcgctttattttgccggtggtttttgtcagaaac  11297400                                                              --------->AHL20(2)                                                             <----------DOF2                                                          <---------ANAC58                                                          <---------ANAC58                                                         <-------TEIL                                                       ------->MYC4                                                       <-------MYC3                                                       ------->PIF5                                                       ------->PIF4                                                       ------->MYC3                                                       <-------MYC2                                                       <-------MYC4                                                       <-------PIF5                                                       <-------PIF4                                                      ==================bZIP_DOF                                                      --------->O2                                                      <---------O2                                                      <---------TGA1a          <---------ARR14(2)                          ==================bZIP_DOF          --------->ARR14(2)           ------------>CBF------->MYC2         ------>MYB83          ----------->GT1        --------->TGA1a         ------>MYB46(1)  <---------YAB1            <---------ALFIN1      <----------DOF2 -------->DOF2 --------->MYB52(1)     *TSS          <------------OsbHLH66<------------------------ANAC81   agaaagaaaccaaatccaaacgaagatgatgaatagttgaatacaattctatctccacgtgcgttttaatgtctctcttttttgttttttgttttttcat  11297500                        ------------>CBF                   --------->ZAT14                                        --------->YAB1                   <---------ZAT14                                        --------->AHL20(2)     <---                 --------->ANAC46                                        <---------ATHB12     -------               --------->ZAT6                                    --------->ANAC46          --------->AHL20(2)             <-----------GT1   <---------ZAT6                   --------->RAP2.6(3)    ----------->GT1   ------------>CBF---------->DOF2                          --------->ANAC46         ---------->DOF2-   ttgagcccaattttgttacactacagcccaatagtgttttttagtctattcaagttgtttacacactacggcccaataaaaatttagtaaagttaaatta  11297600                               <---------YAB1           <------MYB46(1)                             <---------AHL20(2)         <------MYB83                            --------->AHL20(2)         --------->MYB59                         --------->AHL20(2)       --------->DAG2                        <---------YAB1      <---------------AGL15         <---------ICU4        <----                     <---------YAB1        ----------------->AGL3         <---------AHL20(2)    ----- ------YAB1          <---------AHL20(2)  <---------ARR11(3)              --------->AHL20(2) --------- -->ICU4           <---------ICU4        --------->GLK1(2)               --------->ICU4     --------- ------>TEIL----------->GT1 <---------AHL20(2)   ---------->DOF2    ----------->GT1         <--------   tgaatcaccaaaatttgttaaatattattatttattatttcaaaatctaaaaaaagttaggtttgcaatcttgtaataaatatagttcaacaaatttttt  11297700                     --------->YAB1           --------->ANAC58       <-----------GT1 -----HSFB2a(2)     <---------YAB1 ---->HSFB2a(2)   --------->YAB1                                                                   <- >AHL20(2) --------->AtLEC2         <---------AHL20(2)      <-----------GT1                     ----- >AHL20(1) --------->ANAC58   <-----------GT1  --------->AHL20(2)                               <---- -AHL20(2) --------->ANAC46   <---------AHL20(2)<-----------GT1--------->ZAT6   <-----------GT1------   agaaatgttttacatgcaaattatcatcttatttacatttacttaaaaatttactactgatattaccactaaaattgtgtttttacatccaaatatttct  11297800                             --------->ANAC58                             --------->ANAC58 --------YAB1           --------->ZAT6                                                   <---------ANAC58 ---------->AGL15     <-----------GT1                   --------->ANAC58                 <---------AtLEC2 -----------AGL15  <----------DOF2       <----------DOF2--------->ANAC58      <----------DOF2     <-- --->TOE2(3) ------->TEIL   --------->ZAT14           ---------->DOF2    <----------DOF2 <---------ANAC58   taatattgaagtatgtatgctctttaacactacgcacaaatctctttacgaacacattaagccaactatatgtctctttactttcaattttgcatggttt  11297900  Previous    Next  AGI:  At2g26540.1    Description:  HEMD; uroporphyrinogen-III synthase. similar to uroporphyrinogen III synthase [Hordeum vulgare] (GB:ABY56788.1); contains InterPro domain Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; (InterPro:IPR003754) Range:  from: 11294443    to: 11297438    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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