Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <-------TEIL                                           <---------ANAC58                     --------->MYB52(1)                                 --------->DEAR3(1)                  --------->ANAC46                          <---------ANAC58     <---------ANAC58                  --------->YAB1            <---------WOX13(1)       ------->GAMYB ---------ICU4    --------->ANAC55(1)      <---------GLK1(2)<---------ANAC58 <---------MYB52(1) -->RAV1(1)     <---------ALFIN1           --------->ARR14(2)       --------->MYB46(3) -ALFIN1      <---------ALFIN1             <---------ARR14(2)--------------------->WRI1   actcattcccatcgctccacacataacgtccattaccatcttgcagattggccttccagtttccttggtaaccatcgccgtttgcataccgcttctctcc  11248900                                           <------NtERF2             XXXXXXXXXXXXXXXXXXXX>MIR858                                          ------>NtERF2             --------->ANAC46                                         <---------ETT(2)    --------->KAN4(2)                                         <---------bZIP60(1)<---------HSFB2a(1)                  <---                  --------->MYB46(3)     --------->bZIP60(1)--------->HSFB2a(1)               -------                <---------ALFIN1      <-----------RAV1(1)   <---------KAN4(1)               ---------                --------->ANAC46      --------->ALFIN1  <---------ATHB12                ------>ZmHOX2a(1)       <----------DOF2    <---------ZAT18--------->ETT(2)  ------->TEIL--------->DEAR3(1)   <--------   atagccatgctttcttccccacagccaatgccctctataagtgtcgccatctattccaatgaacgttccttcgccatccattcgaccgtccttgaactga  11249000                                                               --------->MYB46(3)                                                           <---------ZAT18                                                           --------->ZAT14                                                           <---------ZAT14                                                       <-------MYC2                                                       ------->MYC3                                                       <-------MYC3                                                       ------->MYC2                                                       ------->MYC4                                                       <-------PIF5                                                       <-------MYC4                                                       ------->PIF5                                                      ====================================MYC_MYB                                                      <<<<<<<<<<AtMYC2                                                      <<<<<<<<<<HY5                                                      <<<<<<<<<<ABI5                --------->SPL7                        <---------TGA1a                     ===========                --------->RAP2.6(3)                   --------->bZIP60(2)             <---------ETT(1)               <---------SPL1(1)                      ====================================MYC_MYB              --------->LBD16                         --------->O2                    ------->GAMYB              <---------SPL7                          <---------O2                   --------->SPL7              ----------->HVH21                       --------->TGA1a --------->TOE2(1)   -----------             --------->HSFB2a(2)                      <--------ABF1   --------->TOE1(1)   --------->AtMYB61         <---------DEAR3(2)                           --------->ANAC55(2)            --------->DEAR3(2)       <---------ZAT18                <---------At5g28300  --------->ZAT18           --------->MYB46(3)      <-----------HVH21--------->ANAC58        =================bZIP_DOF            ------>MYB83 --------------AGL1    --------->ANAC58        <----------DOF2--------->ANAC46      ------>MYB46(1) ---->HVH21  <---------HSFB2a(2)   <----------DOF2    <---------ANAC55(2)         ------->GAMYB >At4g35610 <---------LBD16        =============================bZIP_DOF          --------->AtMYB61 -At4g35610<------------------SPL14------>ZmHOX2a(1)<------------OsbHLH66        --------->MYB46(3)   ccctcataggtcgctccggacggccaagaaaaacgtcctttaccgctcgctttgccacgtgtccactcaccctcgtacatacaaccatccgaccacaaat  11249100              --------->LBD16                                                                <-------             --------->ANAC46 --------->ANAC58                                             --------->RAP2.6(2)     <-----------HVH21 --------->At4g35610                                               <---------At4g35610  <---------ANAC58     --------->LBD16<---------MYB52(1)<----------DOF2                  --------->At4g35610  <---------ANAC58     <---------At4g35610           <---------MYB52(1)                  <------NtERF2  ----------->RAV1(2)--------->MYB46(3)   ---------->DOF2                             <------NtERF2 < =============RAV <---------ALFIN1   <-------GAMYB<------NtERF2 <---------DAG2        --------->At4g35610 >RAV1(1)   <---------LBD16   --------->ANAC58  <---------DEAR3(1)                    <---------At4g35610   acttccctgtcccatgcggaacacccgctgataagcctccgttataaaggtcgccgttctttagcaccttctctactattctaatctcggcagccgtatc  11249200                                 <------NtERF2                                 <---------MYB52(1)                                ------>NtERF2                                --------->LBD16                              <---------LBD16                             ------>NtERF2                            --------->ANAC46                            ------->GAMYB                    --------->ATHB12             --------->REM1(2)                           <---------MYB55(2)               --------->MYB46(3)           ----------->HVH21                           --------->MYB46(3)               <---------ATHB12            --------->LBD16                          ------>MYB83                    --------->MYB52(1)           <---------ANAC58     --------->ANAC58     ------>MYB46(1)               --------->MYB46(3)             <---------ANAC55(1)     --------->ANAC46    --------->MYB52(1)            --------->ANAC58                <---------ANAC58     --------->ANAC58   --------->AtMYB61              --------->ANAC46                <---------ANAC46  <---------O2          <---------ALFIN1            ---------->ARF1            --------->GLK1(2)  --------->O2         --------->MYB46(3)          <---------WRKY18(1)        <---------GLK1(2)  --------->ZAT2       <---------MYB55(2)         ----------->HVH21           <---------ARR14(2) --CCA1(2)   <-----------HVH21<------NtERF2--------------->AtSPL8    <----------DOF2   <---------ANAC55(2) ---------ALFIN1     --------->PCF2   <----------DOF2  --------->ANAC58       --------->ARR14(2)<----   actcacctcgcaacttgtcatgggaaccacccgccgggagctttgtttgtacttgacccccaacgattgctctttattcagattctcttccgtgaagagg  11249300                                                             <----------DOF2                                                            <---------ANAC58                                                            <---------ANAC46                                                            <---------ANAC58                   ----------->TBP                        --------->LBD16                  <---------AHL20(2)                     <---------RAP2.6(2)                 --------->AHL20(2)                     <---------LBD16                <---------YAB1                        <-----------GT1          --------->YAB1               --------->AHL20(2)                 <----------DOF2         ------------>CBF              <---------ICU4                  --------->WRKY38(1)   ---------->ID1 <<<<<<<<<TAC1<--------HAHB4                  --------->WRKY12  <---------ANAC58                <---- --ZmHOX2a(1)--------->ICU4                   --------->WRKY45  <---------ANAC58        <---------ZAT6   aacactgtctcttgcattattatatatgtcttactcagacatttctcgttgacttttatccggcttgtttgtctcttccaataacatttagtgttcaaac  11249400                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                        <---------ICU4                                         ------                           ---------->DOF2                                                 --------->YAB1                    <---------AHL20(2)  --------->YAB1                                  --------->YAB1                    --------->AHL20(2) <---------ATHB51                                --------->KAN4(1)               --------->ICU4          <---------ATHB12                              --------->YAB1          <---------HSFB2a(2)          --------->ICU4                --------->GLK1(2)<---------KAN4(2) -----ICU4--------->HSFB2a(2)      ------------>CBF      <----------DOF2          --------->YAB1   atttcttctgttctgtaagtatttaaaaacaaaggtgatcaataatgaccctaaaattactttgatgctaaaatctgaatgaaattagaataatcaaaat  11249500          xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                       <---------At4g35610         xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                        --------->At4g35610 --->ARR14(3)             <------------CBF       <------------CBF                 <---------ARR14(2) ----ARR11(3)           --------->AHL20(1)      <---------ICU4                    --------->ARR14(2) --->ARR11(3)           --------->AHL20(2)      --------->ATHB12       --------->AHL20(2) ----ARR14(3)           <---------AHL20(2)     <---------YAB1        <----------DOF2          ------- --->GLK1(2)           --------->AHL20(2)      --------->ICU4       --------->TOE2(3)  ---------->DOF2   cttgtatgaaaaaaaaaaaaaaaaaaaaaattgctaagagtttaatgtcatcattgtaatgttatgtcttcctttaaattttggtatctgaaaggaagga  11249600                                                  <---------WRKY18(1)                                                 --------->WRKY45                                                 --------->WRKY12                                                 --------->WRKY38(1)                                                <---------MYB52(1)                                           <---------ARR14(2)                                           --------->ARR14(2)                                     --------->ATHB12                             --------->ATHB12   --------->DOF5.7(2)    ---------->DOF2         <---------ATHB12 <-------TEIL ---------->DOF2                   <-------- ---->GT1          -------->P<--------HAHB4<---------GLK1(2)     --------->ICU4           <----------   aaaaaaaaaagaaaacaaacttacccttgaatcatttatagattggattcgttgactgagaaaagaaatgatcaaatggactattcaagaacccatatca  11249700                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                          <---------WRKY38(1)                                                                                          <---------WRKY12                            <---------GLK1(2)                                             <---------WRKY45 -CCA1(2)          <---------ALFIN1                       ----------->RAV1(2)    <---------TOE2(3) -- -----AGL15   --------->GLK1(2)                         <-----------GT1----------->GT1   --------->WRKY18(1)   agaagtaatgcatgagaatcaacacatcaaaattctcagaaaacaaacaaattgttttttacctgagtaatagaagtgaaattgatgtatggtcaaccgc  11249800  Previous    Next  AGI:  At2g26420.1    Description:  PIP5K3; 1-phosphatidylinositol-4-phosphate 5-kinase. Identical to Phosphatidylinositol-4-phosphate 5-kinase 3 (PIP5K3) [Arabidopsis Thaliana] (GB:O48709); similar to ATPIP5K1 (ARABIDOPSIS THALIANA 1-PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 1), 1-phosphatidylinositol-4-phosphate 5-kinase [Arabidopsis thaliana] (TAIR:AT1G21980.1); similar to phosphatidylinositol-4-phosphate 5-kinase family protein [Arabidopsis thaliana] (TAIR:AT3G07960.1); similar to 1-phosphatidylinositol-4-phosphate 5-kinase, putative / PIP kinase, putative / PtdIns(4)P-5-kinase, putative / diphosphoinositide kinase, putative [Arabidopsis thaliana] (TAIR:AT1G77740.1); simil Range:  from: 11246512    to: 11249317    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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