Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      --------->ALFIN1   ------->PIF4   <-------PIF5   <-------MYC2   ------->MYC2   ------->MYC4   ------->PIF5   <-------MYC3   <-------PIF4     --------->At4g35610   ------->MYC3  --------->ZAT2 -----NtERF2     <---------ZAT2 ---->At4g35610  --------->At4g35610 --NtERF2<---------MYB111(1) >NtERF2--------->ZAT2            ------->GAMYB ----ATERF1(1)   <---------At4g35610  --------->At4g35610 -->ANAC46 -------->P     --------->At4g35610 ---DEAR3(1) ----------->RAV1(1) --------->MYB46(3) ->LBD16--------->At4g35610      <---------MYB55(2)   <---------ANAC58 ->At4g35610 --------->AtMYB61  <---------At4g35610   <---------ANAC58 --LBD16<---------ZAT2    <---------At4g35610  --------->At4g35610                                 -- --At4g35610 <---------ALFIN1  ----------->RAV1(1)---------->DOF2                         --------->GLK1(2) >CDC5  <---------At4g35610  <------NtERF2    <---------ARR11(3) <----------DOF2         <---------GLK1(2)   cagcatgtgcagctaccacagctgcttcggctgcaacagccgatgcaagagctaaagcttgtctattctttgattctttagactcaccatagattcttgt  11243400                                                                                     <---------MYB46(3)                                                                                    --------->ALFIN1                                                                                    <---------ANAC46                                                                                   --------->At5g28300                                                                                   <------NtERF2                                                                                   <-------GAMYB                                                                                  <---------ORA47(2)                                                                                 <---------DREB2C(2)                                                                                <---------ABI4(1)                                                                               <---------ATERF1(1)                       <------ZmHOX2a(1)                                      <---------DEAR3(1)                     --------->ALFIN1             --------->At4g35610         --------->ALFIN1                    <------ZmHOX2a(1)           --------->MYB46(3)           <---------ABI4(1)                  --------->ALFIN1      <---------MYB46(3)                   --------->ATERF1(1)                 <------ZmHOX2a(1)   --------->MYB55(2)               --------->MYB52(1)--------->CCA1(2)              <------NtERF2          <---------MYB46(3)              ----------->HVH21 <---------ARR14(2)            <---------ANAC46        <---------AtMYB61              --------->LBD16<---------MYB46(3)           <---------LBD16          --------->ALFIN1           <---------ARR14(2)--------->ALFIN1       <----------TaMYB80           <---------DEAR3(1)         --------->ARR14(2)<---------DEAR3(1)      ---------->TaMYB80   --------->ALFIN1   --------->MYB52(1) <---------LBD16<------NtERF2      <---------ARR14(2)<---------AtMYB61    --------->MYB46(3)--------->GLK1(2)--------->ATERF1(1)      --------->ARR14(2)--------->ALFIN1----------->GT1  ----------->GT1<XXXXXXXXXXXXXXXXXXXXMIR408 ------->ICU4--------->LBD16     <---------DEAR3(1)     <------ZmHOX2a(1)------->GAMYB --------->ARR14(2)   attgatggtatatgccggaggaggaggaggtggagacggtggtggtaacaacggctgaggagcaaaatccggcaacgggggaggcggtggatatggacga  11243500                                                        --------->ARR14(1)                                                        --------->GLK1(2)                                                       --------->ARR11(3)                          --------->ALFIN1             <---------ARR11(3)                     -------->P                        <---------ARR14(2)                   <---------WRKY38(1)           --------->YAB1                            ------>ZmHOX2a(1)                   <---------WRKY12   --------->HSFB2a(2)                              --------->ARR14(2)                  --------->WRKY18(1) <---------HSFB2a(2)                              <---------ARR14(2)                 <-----------HVH21  ------>ZmHOX2a(1)  --------->ARR14(2)       --------->MYB46(3)           --------->ALFIN1--------->ZAT14    --------->GLK1(1)   <----------DOF2     <XXXXXXXXXXXXXX           ----------->HVH21   --------->ATERF1(1)     <---------GLK1(2)      --------->MYB52(1)  ---   tgaacagaagaaggtgaagggtcaaccggtggagtctcctccagagggaaatcaaaagattctctactcttttgtttcccaaacgaccatttcctcttcg  11243600                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                          <---------ICU4                                                                                         --------->ICU4          <---------ANAC58                                                               <---------YAB1          <---------ANAC58                                                             --------->YAB1       --------->GLK1(1)                                                         <---------ANAC55(2)   <---------LBD16              ---------->DOF2                        <---------ICU4  <---------ICU4  <---------LBD16           ------------------------>ANAC81         --------->YAB1    <---------YAB1 XXXXXXXMIR2933A/B   --------->ANAC58                          --------->ATHB12  --------->ANAC55(2) ------>ARR14(2)     --------->ANAC58       --------->YAB1  --------->YAB1  ----------->GT1     <----   gtttctcgggtttcttgataaacaaggcaaaaccaaaagaccaaaatcaaaacaattagcaatcttgatttcataatcaggttacataatcataatcaat  11243700          <---------GLK1(2)          --------->ARR14(2)          <---------ARR14(2) -----ATHB1 ------ICU4 -----HAHB4 ----->YAB1 ---------ATHB5 ----->ATHB12                                 --------->LBD16           ------->MYC3 ----->ATHB51          -------->P           <---------LBD16             <-------MYC3               <- ---->AHL20(2)         ------>MYB46(1)  <----------DOF2   --------->ANAC58             <-----------GT1 ---->ICU4--------->ARR11(1)    <----------DOF2           --------->ANAC58         <---------ARR11(3) -----ATHB12           ------>MYB83   ---------->ID1      --------->ANAC46         <-----------ARR10 -----ATHB51<-------TEIL    <---------GLK1(2)<---------LBD16  <---------LBD16<-----------GT1       --   aattagagaacagattcgaaacaccaacttgattctttttgtctttccctggagataaacaagccacggagacacatgttaaccagttcttacccatttt  11243800 ------>ZmHOX2a(1)                                          ------------>CBF      <---------ANAC55(2) --------->LBD16 --------->ARR11(3)                         <---------ATHB12      <---------ANAC46 --------LBD16   <---------ARR11(3)              <---------DAG2         --------->CCA1(2)  --------->ARR11(3) --------->RAV1(2)     --------->ATHB12          <----------DOF2 --------->YAB1--------->GLK1(2)    -   ctcctgaaattttcagacaaatctttcattgaaacattttcttacaaaacactttatgtgaaatcaataagaagagatgagattatgtgaagagacctcg  11243900                   <---------LBD16                   --------->TOE1(2)                  <---------ANAC58                  <---------ANAC58                  <---------ANAC46               <---------ARR14(2)               <---------GLK1(2)               --------->ARR14(2)           ------>NtERF2                                                                       <-----          <---------ALFIN1                                                                --------->TOE2(3)         --------->ATERF1(1)                                                             --------->ANAC58         <---------ABI4(2)                                                               ----------->GT1         <------NtERF2                                                                   --------->ANAC55(2)         --------->MYB46(3)                                                              --------->ANAC58        <---------ATERF1(1)                                                              <---------ANAC55(2)        --------->TCP15(2)                                                              <-------TEIL        --------->TCP23                                                                --------->ARR14(1)       <---------TCP15(1)           <----------DOF2                                    --------->CCA1(2)       <---------TCP20     ------------>CBF                                           <---------GLK1(2)       --------->PCF2     --------->ANAC58   --------->ATHB12                         --------->ARR14(2)      --------->PCF5   <---------PCF2       <---------YAB1                            <---------ARR14(2)      --------->TCP15(1)  --------->ANAC58  --------->ICU4                            --------->ARR11(1)      <---------PCF2 <---------TOE1(2)    <-----------GT1                       --------->ANAC46   -- ---------->HVH21<-------TEIL <------------CBF<------------CBF                <-----------GT1  ------   tcgtgatgggccccaccgattcgtgggaacccaattgacttttgtaacgattgtgttttgtaagaacgattcaacagatttaacgacagatacgttataa  11244000                                        --------->At4g35610        <----------DOF2                 <---------At4g35610              <----------DOF2  <-----------GT1              <---------YAB1                         <-----------GT1              <- ----AHL20(2)                 <-----------GT1                        <-----------GT1            <---- ------->YAB1             <---------AHL20(2)        <----------DOF2<---------AHL20(2) <---------AHL20(2) --->AHL20(2)            <---------AHL20(2) --------->MYB52(2)   <---------YAB1       --------->AHL20(2)   attataacttctttttagttgtttttttttattttcattctctgcttagttgttctttctatatgttatttttatctttttttttttttttaatatttct  11244100                                --------->YAB1                             --------->YAB1                           <-----------TBP    <---------AtMYB61  <----------DOF2  <---------ANAC46     <---------DAG2                                              <---------YAB1 ----------RAV1(1)<---------At5g28300       <---------MYB52(1)         <---------TOE2(3) -------RAV1(1)  <-----------GT1<-----------GT1                        <---------TOE1(3)      <------   ggtgttgtggtttttagaattacagctttttttataacaattatctgttagacaaatttagaaaattgagtttaaagttttgatgatgctaatgctcttt  11244200                                                 <---------MYB46(3)                                                 <------MYB83                                                <---------AtMYB61                                                --------->MYB59                                            <---------YAB1                                       --------->ATHB51                                       <------                                       --------->AHL20(2)                                     -------                                --------->MYB46(3)<-------GAMYB          --------->ANAC58    ------>MYB46(1)                  <---------GLK1(2)   <---------MYB52(1)      --------->TOE2(3) ----------->GT1 ----DOF2       ----------->ARR10--------->ANAC46<------MYB46(1)         --------->ANAC58    ------>MYB83   atccattccactctgggtttgattctcactctcaccctccattattttgtttggttgagagttttcttaatcaacaagaaataagttataaaaccaaatc  11244300  Previous    Next  AGI:  At2g26410.1    Description:  IQD4 (IQ-domain 4); calmodulin binding. similar to IQD3 (IQ-domain 3), calmodulin binding [Arabidopsis thaliana] (TAIR:AT3G52290.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66644.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048) Range:  from: 11241729    to: 11243829    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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