Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <---------ANAC46                                                             <---------YAB1                --------->ANAC58                                                             --------->AHL20(2)          <--------P                                                             <---------AHL20(2)       <---------HSFB2a(2) --------->REM1(1)              --------->YAB1              --------->AHL20(1)        --------->HSFB2a(2) -------TEIL                 --------->YAB1                 <---------AHL20(1)     ------>ZmHOX2a(1) ----->At4g35610   --------->YAB1    <---------ARR11(3)     --------->AHL20(2)  <---------------AGL15 ->ANAC46          --------->AHL20(2)--------->ARR11(3)    --------->YAB1   <-----------GT1--------->ANAC58   gcttcatctatccaaaaacaataaaaacaaataatcaaaaatctcatggaaactcagacaaatataatttagtgtatattacctccttctggtaagcaag  11227200                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                          <---------ANAC58                                                               <---------TOE2(3)          <---------ANAC58                                                              ---------->DOF2             <------MYB83                  ----------->GT1   --------->ATHB12         --------->YAB1               <------MYB46(1)           --------->TOE2(2)        <---------AHL20(2)    --------->WOX13(1)             <---------MYB46(3)           <---------MYB59         <---------AHL20(2)  --------->ANAC58                  --------->MYB46(2)           --------->TOE1(2) ----------->GT1           --------->ANAC58                  <---------AtMYB61         ------->TEIL    <---------ICU4        --------->MYB52(1)                        --------->MYB111(1)  --------->GLK1(2)----------->GT1 --------->AHL20(2)---------->DOF2      <---------MYB46(3)  <------NtERF2  <---------ARR14(2)    --------->ICU4         --------->YAB1--------->AHL20(2)      <------MYB83 <---------GLK1(2)<---------ZAT6  <---------YAB1<---------TOE2(3)       <-------GAMYB<------MYB46(1)   agcgattcttgtacctaagagtgataaaaattagttattaattggacaataacgatgaagcaattaaagtagacagttgttgttgtttggtttggtgtcg  11227300                                                                                                 <---                                                                                                -----                                                                                                -----                       --------->SPL7    <-------TEIL                                           <----                    <---------ANAC46  <---------ZAT2                                    <---------ICU4                    --------->ETT(1)  <---------HSFB2a(1)                       <---------At4g35610                   <------NtERF2      --------->HSFC1(2)                        --------->At4g35610                  <-----------HVH21   <---------HSFC1(2)                        --------->ZAT2 ------                 --------->ALFIN1     --------->ZAT2                         --------->ZAT2    ------   <---------------AtSPL8            --------->ANAC58                        <---------ZAT2  <-------   <---------------AtSPL3            --------->ANAC58    <---------ANAC58    --------->At4g35610----- --->ETT(1)   --------->DAG2      <------NtERF2          <---------ANAC58    <---------At4g35610<---- ----->GT1   --------->DAG2    <---------LBD16    ---------->DOF2     <----------DOF2   <---------GLK1(2) ----ANAC46 ---------->DOF2  <------NtERF2<---------ANAC46        ------>ZmHOX2a(2)  --------->YAB1   gaaaaattgtaccgaaaaggtgtcggaaggcatcgcggcaagcttcgtggatgaaagaagcgtattgatcgtctttctcagcagctctcataatctccgg  11227400       --------->MYB52(1)    <---------At4g35610    --------->At4g35610 --------->ZAT2 <---------ZAT2 --------->At4g35610 <---------At4g35610                                                    <---------ARR14(2) -------CDC5                                                            --------->ARR14(2) ---->At4g35610               --------->LBD16                     --------->ARR14(2) ------>RAV1(2)               --------->At5g28300             <---------LBD16 -----At4g35610              <---------ANAC46             ----------->HVH21 >NtERF2                   ------>NtERF2                  ------>ZmHOX2a(1) --->LBD16                 --------->LBD16              <---------ICU4 <---------GLK1(2) --LBD16               --------->ARR14(2)               ----------->RAV1(2) ---->ZAT2    --------->ARR14(2)                    <-------TEIL  <---------ARR14(2) -----ZAT2    <---------ARR14(2)                --------->LBD16 --------->LBD16                 <----   ctgagctgctaacgggaatcgtctgattccgccgtgaaacccgctcgaaccgggttcatcctgacccggacccgaatccccattaagcctcatcgtttct  11227500                 ------->TEIL         <---------ARR14(2)     <---------LBD16                                                         --------->AHL20(2)    <---------ANAC58                             --------->YAB1       ----------->GT1    <---------ANAC58                          <----------DOF2      ---------->DOF2   *TSS     -------    <---------ANAC46                <---------AHL20(2) <---------AHL20(2)    <---------AHL20(2) ------DOF2------>ZmHOX2a(2)--------->YAB1 ------>NtERF2     <---------AHL20(2)  <---------AHL20(2) -   tttttttcgtggatcgatgaacttgccgaatgatgttttttattcggcctttgatatttttttttaattcaaaggaaaaataaatatttgcaaatgtatc  11227600                                       --------->YAB1                                      <---------YAB1                                 <---------ICU4                                <---------AHL20(2)                                --------->AHL20(2)                            --------->AHL20(2)                            --------->AHL20(1)                            <---------AHL20(1)                            <---------AHL20(2)              --------->YAB1                         --------->AHL20(1)                <---------YAB1                         <---------AHL20(1)          <---------YAB1                      --------->AHL20(2)           --------->ATHB51                 <------ZmHOX2a(2)  <---------ICU4 <---------ICU4                 ------------>CBF--------->YAB1    <---------AHL20(2)      <---------AHL20(2) <---------AHL20(2)    --------->AHL20(2)      <-----------TBP --------->YAB1--------->YAB1 --------->AHL20(2)    <-----------TBP  <---------ATHB12--------->AHL20(2)<---------AHL20(2)     --------->YAB1 >TEIL--------->AHL20(2) --------->AHL20(2)    <---------AHL20(2)          --------------->AGL15 ----->NtERF2   --------->ARR11(3) <---------YAB1 --------->ICU4           <---------------AGL15    -   gatgccatttatatatgagatcaataatattttattaattataatctttttaattatttttatgatcaaatatttgtctatattaagcagtattttgtaa  11227700                                                                                                    <                                                                                                  <--                                                                                                  ---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                              -------                                                                                              <------                 <---------At4g35610                              --------->AHL20(2)          -------                 --------->At4g35610              --------->AHL20(2)                         --------               --------->ZAT18                  ----------->GT1 --------->YAB1            <--------HAHB4             <-----------HVH21                  --------->ANAC55(2)                       <---------ICU4          <---------ANAC46                      <---------ANAC55(2)                    --------->TOE2(3)    <---------ATHB12                       <---------YAB1  <<<<<<<<<MYB98             *TSS--------->ATHB51  --------->WOX13(1)                  --------->ANAC55(2)----------->GT1     ---------->DOF2 <------- ----------->CBF <---------ZAT2       <---------ANAC55(2)<---------YAB1  --------->LBD16 --------->ICU4   tagtcaatcgattcgggtgagctgattagttttttagaatacatgatgttaagtaaattatgttaaaaataaatccgagcaaagtgtttccataattaaa  11227800          <---------RVE1(1)         --------->ARR11(3)         <---------ARR11(3)  ---------->DOF2 ---------YAB1 -------ICU4 ----->ATHB1 ----->ICU4                                                                                --------->YAB1 ------ATHB51                                                                              ========== ----->AHL20(2)                                                                            ------>ZmHOX2a(2) ------AHL20(2)                                                                           =========== -->AHL20(1)                                                                      --------->DAG2 ---AHL20(2)                                                                     ---------->DOF2 ---- -->AHL20(2)     --------->TOE1(3)                                     --------------->AGL15     ==== ->AHL20(2)      --------->TOE2(3)                                     <---------------AGL15   <----- --AHL20(2)   <-----------GT1<----------DOF2        <----------DOF2    ---------->ID1     <------ZmHOX2a(2)   ttattaaaggagatattaaccttgacgaaaactttctctcttctctctcaaaaacttttgagagagagagtttgtttttttggtaaagtccgatcgtgat  11227900                                 <---------LBD16                               <-----------GT1                          ----------->GT1                        --------->SPL7                       <---------MYB52(1)                      <---------RAP2.6(3)                      <-----------HVH21                                         <---------ANAC58                      <---------SPL7     ------>ZmHOX2a(1)                      <---------ANAC58      ------->TEIL    ------>NtERF2   ------>NtERF2                         <---------ANAC58        -     <---------AtLEC2--------->DEAR3(1)----------->RAV1(2)                  <---------ANAC58        < =======================HOX2a_HOX2a  <---------ARR14(2)                   --------->MYB55(2)      --- =======================HOX2a_HOX2a  --------->ARR14(2)                   <---------MYB46(3)     <--- -->ZmHOX2a(2)    --------->ANAC46 <---------ATERF1(1)                <-----------RAV1(1)    -------- =======================HOX2a_HOX2a--------->LBD16                    <---------ZAT6         <------- ----ARR11(3)    ------>ZmHOX2a(1)--------->ANAC46             ---------->DOF2  <---------ANAC46<----   ctcatatgcatgttctatcctcgccgtccggtttatccggctcctgtccagcatcgactagcttctaaagtagtgttggctggcttatgtctggcgattt  11228000                                                                      ------>ZmHOX2a(2)                                                                     <------ZmHOX2a(2)                                                                     --------->CCA1(2)                                                                    <---------ARR11(3)                                                                    --------->ARR14(2)         <---------At5g28300                                        <---------ARR14(2) ----->NtERF2                                                       <---------AGP1 ---------RAP2.6(3)                                                 --------->AGP1--------->ICU4 ------->ID1                                                        --------->ARR11(3) ------At5g28300                                                  ----------->ARR10 ->ARR14(2)                             <---------TOE2(3)<---------ICU4      <------MYB83           < --ARR14(2)                        <---------MYB46(3)    --------->YAB1      <------MYB46(1)     <--- -------GT1          ------>NtERF2 --------->MYB52(2)   <---------ATHB12    <---------MYB46(3)-------   gccgtcttgtttacggtgtcttcggccagttttgggtttgttaagtttttttgtttcaataatctcattagatctgagttggtgatgatgttttaggtgt  11228100  Previous    Next  AGI:  At2g26350.1    Description:  PEX10 (PEROXIN 10); protein binding / zinc ion binding. Identical to Peroxisome assembly protein 10 (PEX10) [Arabidopsis Thaliana] (GB:Q9SYU4;GB:O65895;GB:Q8LBN2;GB:Q8S8Q5;GB:Q9M400); similar to RMA1 (Ring finger protein with Membrane Anchor 1), protein binding / ubiquitin-protein ligase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G03510.2); similar to RMA1 (Ring finger protein with Membrane Anchor 1), protein binding / ubiquitin-protein ligase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G03510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43873.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterP Range:  from: 11224517    to: 11227585    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g26355.1    Description:  other RNA Range:  from: 11227786    to: 11228613    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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