Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                              -------                                                                                           --------->YAB1                           <---------YAB1                                               --------->HSFC1(1)                       <---------DAG2<-----------GT1                                    --------->HSFB2a(2)                       <----------DOF2-------->P                                        <---------HSFB2a(2) -------->YAB1       <---------At4g35610             ---------->DOF2                    <---------HSFC1(1)   actcataagtcaaaacccattgcagcttttttatagttcttaccagacaaacacataaagacttaaaatttgaaacacaactactaaattctagaataag  11198000     <---------AHL20(2)     --------->AHL20(2)   --------->TOE2(3)   <----------DOF2                                                                                 -- ---------ARR14(2)                                                                                 -- ---------ARR11(3)                             <---------RVE1(1)               <---------ARR14(2)  -- -------->ARR11(3)                            <---------ARR11(3)               --------->ARR14(2)---- -------->ARR14(2)                  --------->AHL20(2)                         <---------GLK1(2) ---- --------GLK1(1)               <----------DOF2<---------GLK1(2)    ----------->GT1      <---------AHL20(2) ------->GLK1(1)    ---------->DOF2<---------YAB1      --------->AHL20(2) --------->MYB52(1)  <------ -->MYB52(1)       --------->AHL20(2)         --------->ARR11(3)  --------->CCA1(2)     --------->AHL20(2)   ggtatctttaaatgactgaaataaaagaaaaccctttattaaaaacaagatttttaagtaaatccaagatagaaaaaaacagatttgtgatttattaaac  11198100                                                                                      ------>ZmHOX2a(2)                                                                                     <------ZmHOX2a(2)                                                                                    ------->TEIL                                                                                    <---------ARR14(2)                                                                                    --------->ARR14(2)                                                                             ========================                                                                             ===============HOX2a_HOX2a                                                                             ================HOX2a_HOX2a     ---------->DOF2                     --------->CCA1(2)                   <------ZmHOX2a(1) ------->ANAC58                  <---------ANAC46                          <---------TOE2(3) ------->ANAC46                 <-------TEIL               ---------->DOF2 <---------TOE1(3) ------->ANAC58                --------->GLK1(2)--------->ARR11(3)     <----------DOF2<-------TEIL ----->AtMYB61                <---------GLK1(2) <---------ARR11(3)    --------->TOE1(3) ------->RAV1(1)            ----------->ARR10  --------->RVE1(1)    <-----------------AG -----GT1           <---------ATHB12  <---------ZAT6   ---------->DOF2--------->TOE2(3)  --------->AtLEC2   cacacaaaaaagaagaacccaaatcaagatgagattcgtagagataagaatatctctgaaagaaagagcaaacctttaaggaaatggatccatggaagat  11198200                    ---------->DOF2              ---------->DOF2    --------->At4g35610         ----------->GT1         <---------At4g35610    <------ZmHOX2a(2)            <---------ZAT2   --------->ARR11(3)     ---------->DOF2                                                        ----   <---------ARR11(3)--------->DAG2<---------MYB46(3)       ---------->DOF2        <---------ANAC46 ==========HOX2a_HOX2a--------->DAG2<-------GAMYB ---------->DOF2            ----------------->AGL1   aacaagatcagaggttaaaagaaaaaggtaaaggctgctgttgaaaacaagataaagagagagaaagatgagaaattttgcagtttggggtaatcggaga  11198300                    <---------ARR14(2)                                                  <---------ANAC58               ------>ZmHOX2a(1)                                                        <---------ANAC58       <---------MYB52(1)                                                           <-------GAMYB      <-----------HVH21                                                            --------->ALFIN1   <---------At4g35610             <--------P                                  <---------ANAC46     - ----->At4g35610    --------->ARR14(2)                          --------->YAB1<---------LBD16  ------   gcttaagctgttacctcctagggattcgagttttggggtaagcgtcgtcttcttctactctctctataagagtaattgtttgggggtgttgtttggctaa  11198400                                        ------>MYB46(1)                                      --------->MYB46(3)                                      <---------MYB46(2)                                     --------->ANAC58                                     --------->ANAC58                                --------->ANAC46                            <-----------GT1                       <---------AHL20(2)      <---------ANAC58                       --------->AHL20(2)      <---------ANAC58                      --------->AHL20(2)------>MYB83            <----------DOF2              --------->AtMYB61 --------->ANAC58<---------RAP2.3(1)     --------->ZAT6 <---------ARR11(3)--------->AtMYB61        <---------DAG2                     --- ---------->GT1*TSS --------->ARR11(3)<---------MYB111(1)   <-----------GT1                    ------ ---->DOF2  ----------->RAV1(1) --------->ANAC58------>NtERF2---------->ID1                   -------   agaggtaacacgagcaccacaagatttatttaacaagacaccaaaccttgcgcctctcgttttgaccttttttttttttagtgactccatctatctacaa  11198500                                                                                       <------MYB46(1)                                        <---------TOE2(3)                              <------MYB83                                       --------->MYB52(1)                      --------------->AGL15         <-----------GT1           --------->ZAT6                              <----------DOF2     <---------AHL20(2)           <---------YAB1                               <---------------AGL15    --------->AHL20(2)         ------>ZmHOX2a(1)                              <---------ANAC58    <---------AHL20(2)        --------->TOE1(3)                               <---------ANAC58 <---------AHL20(2)          <---------ICU4                                   <---------ANAC46 --------->AHL20(2)    --------->ANAC55(2)         --------->YAB1         <---------ANAC58 ------>TOE2(3)        --------->ANAC55(1)         ----------->GT1        <---------ANAC58 ----->RAV1(1)         <---------ANAC55(2)     <---------AHL20(2)   <---------YAB1    <---------TOE2(3) -->REM1(1)     <---------ICU4--------->TOE2(3)<---------YAB1     <----------DOF2     --------->MYB59   catttatttattaactactaatgacacttaatccttatcactaagggttttaattgtaaatttttgggctttgattacttgcttttattaggttaactat  11198600                             --------->GLK1(1)       ------>ZmHOX2a(1)                             <---------GLK1(1)       --------->LBD16                            --------->ARR11(3)      --------->TOE2(3)                            <---------ARR11(3)   <---------ARR14(2)                          <---------TOE2(3)      --------->ARR14(2)                                 <                      --------->YAB1             <---------ARR11(3)                 ---------->DOF2<-                     <---------AHL20(2)          --------->ARR11(3)         <---------ARR11(3)     <-                    <---------AHL20(2)          <---------GLK1(1)           --------->GLK1(2)      --             <---------AHL20(2)             <---------YAB1                  --------->ARR11(3)    ---            <---------AHL20(2)         <---------AHL20(2)             <---------AHL20(2)          ---            <---------AHL20(1)        <---------ARR11(3)            <---------YAB1 --------->AHL20(2)            --------->AHL20(2)        <---------AHL20(1)           <---------AHL20(2)<---------TOE2(3) <----------DOF2    --------->AHL20(2)--------->AHL20(1)         <---------YAB1    <---------AHL20(2)   ttcctttcaactaatttttttttttaataagatttctctatatattttgaatatcctgaattagcttattattttaaaaatctaattaaagtttatacaa  11198700           <---------TOE2(3)    --------->AHL20(2)    <---------AHL20(2)                    --------->TOE2(3) ---------YAB1                           ----------->GT1 --------AHL20(1)                        <---------ZAT6                               <---------YAB1 --------AHL20(2)                       <---------YAB1                                --------->ICU4 ------->AHL20(1)                    <---------YAB1<---------ANAC58           --------->DAG2 ------>AHL20(2) --------->YAB1   <---------WOX13(1)<----------DOF2          ---------->DOF2       -- ------>YAB1 <------ZmHOX2a(1)  --------->ATHB12   <---------ANAC58     ----------->GT1  <---------YAB1   ttatatttatatttaggaaaaataatcttcaaactgattgttattgttaatttgctttgaatttaagtcatctagggaaaaaagtatacttattgttgat  11198800                                <-----------GT1                            <---------AHL20(2)                            --------->AHL20(1)                            <---------AHL20(1)                            --------->AHL20(2)                         <---------AHL20(2)                         <--------ATHB1                         --------->AHL20(2)                        --------->ICU4                      --------->YAB1                     <---------AHL20(2)                    <---------AHL20(2)                    --------->AHL20(1)       <---------AHL20(2)--------->ATHB51       --------->AHL20(2)<---------ICU4                                               --------->ICU4   --------->AHL20(2)--------->AHL20(2)                                 ----------->GT1 >>>>>>>>>GATA-1    --------->AHL20(2)    --------->ANAC46           --------->MYB52(1) --------->GT1 <---------AHL20(2)       <-----------GT1          --------->ANAC46--------->ANAC55(2)   atagataaaataaatataaaaatttaataatttattacatttatacagcattctgaaactcaaatatacccaaacggtttcatatgtaatcttgaaaacg  11198900  Previous    Next  AGI:  At2g26280.1    Description:  CID7; ATP binding / damaged DNA binding. similar to PRLI-interacting factor, putative [Arabidopsis thaliana] (TAIR:AT5G58720.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96374.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43904.1); contains InterPro domain Smr protein/MutS2 C-terminal (InterPro:IPR002625); contains InterPro domain Region of unknown function DUF1771 (InterPro:IPR013899) Range:  from: 11194811    to: 11198415    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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