Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----         <---------ANAC46                                                                --------->At4g35610   --------->DAG2                                                                        <---------ZAT2  ---------->DOF2                                                                        --------->ZAT2 ------->ANAC58                                                  --------->GLK1(1)       <---------At4g35610 ------->ANAC46                                        <----------DOF2                  ----------->RAV1(1) ------->ANAC58                                     <---------ARR11(3)                <---------At4g35610 ------>LBD16                                       --------->ARR11(3)                --------->At4g35610 -->ARR14(2)           --------->At4g35610    <----------DOF2    --------->At4g35610 ------->GAMYB ---ARR14(2)      <---------YAB1       ----------->HVH21       <------ZmHOX2a(1)    --------->MYB46(3) -->GLK1(2)   <---------GLK1(2)      --------->HSFB2a(2)    <------ZmHOX2a(1)     ----------->RAV1(1)   cacgaaaagcggtttggattctaatagcagcccattcttctctaacagctttgaaatctttaggaggagctctaagaacagtagcaacagcagcagagta  11151800                                          --------->HSFB2a(2)                                          <---------HSFB2a(2)      --------->ZAT14           <-------                 --------->DEAR3(1)       --------->LBD16          <---------ZAT14           <------- -----ZAT14   <---------ALFIN1            ------>ZmHOX2a(1) ------->TEIL     ------>ZmHOX2a(1)      <   aacagtagaagaatcaacaccgtctgaatcagaccgatgttttcctcgaaaacccttccatgaatctactgaagtagtcctccatagcttccatttcttg  11151900                              --------->ARR14(2)                              --------->ARR11(3)                              <---------ARR14(2)                  ------>ZmHOX2a(1)          <----------DOF2                            --------->MYB52(1)            <---------DAG2    <---------ARR11(3)                                       --------->TOE1(2) ---------->ID1   --------->LBD16        --------->DAG2                              ------->TEIL --ANAC58   <----------DOF2   --------->GLK1(2)    --------->TOE2(3)          --------->ARR11(3) --ANAC58  <---------DAG2     <-----------ARR10 <-----------GT1               <---------ARR11(3) -----------GT1 <---------LBD16         ---------->DOF2                   ---------->DOF2 <---------YAB1   tttttcccattacccttttcctgaaaacagagtatctctcgataaagctttaacctttgaacgagagaacaaaaaaaaaagataatgaacttacgatttc  11152000                                                                                        <---------ARR14(2)                                 <---------WRKY18(1)--------->ANAC58        <----------DOF2                                ----------->HVH21   --------->ANAC58       ------>ZmHOX2a(2)        <                       <---------ATHB51       ---------->DOF2            --------->ARR11(3)   <------         <---------GLK1(2)   ------->TEIL  ----------->RAV1(2)           <---------ARR11(3)   <------ ------>ZmHOX2a(1) <-----------------AGL1  <---------LBD16   --------->AHL20(2)         --------->ARR14(2)   atccttctctagcttcttgagaccgataatggacttgacccatttccctgaagcacccatagattaaaaagtttcgatctttttggctcgaattcgtaga  11152100          <-----------RAV1(2)  <---------AHL20(2)                                                             *TSS               < ---------YAB1                                                      --------->GLK1(2)             <-- ---TOE1(2)                                                 --------->MYB52(1) --------->ALFIN1  <--- ---TOE2(2)  <---------MYB52(1)         <---------WOX13(1)  <---------ARR14(2) <---------AtMYB61 ----   ttatttttttcttcaggtatgtagaaagtttgagagtgagagattgatagagagagagagaatatcggagaatgtgaagttgtggtggtaatggagggag  11152200                                                                <---------AHL20(2)                                                                --------->YAB1                                                             --------->YAB1                                                          --------->TOE2(3)                                                 ------->GAMYB  --------->AHL20(2)                                                --------->MYB46(3)      ---------->DOF2                           <---------MYB52(2)   <-------GAMYB                              ----------->RAV1(1)  <------MYB46(1)                            <----------ID1--------->AHL20(2)  <------MYB83                             --------->ANAC58<---------AHL20(2)  ----------->GT1                          --------->ANAC58<---------YAB1 <---------MYB46(3)                      ---------->DOF2--------->AHL20(1) ---------ANAC46                      --------->ANAC58  --------->AHL20(2) -------MYB46(3)                      --------->ANAC58  <---------ARR11(3) ------AtMYB61                      ---------->DOF2     <---------AHL20(1)               <----------DOF2 ----->ALFIN1                     <---------ATHB12  --------->YAB1---------->DOF2 <----------DOF2 <--   tggtgggttaaagagaagtttttgaaatttgaacaaatcaaagcaaagcaacaaacaaaatattaataaaaagtttgctcgagtctttaggcttttgtct  11152300                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                              <------                                                                                           ----------                    <---------ICU4                                                        --------->DAG2                    <---------AHL20(2)                                                    -----------                   <---------AHL20(2)                                                   ---------->DOF2          <-----------GT1                                                  ---------->DOF2<---------- -------YAB1       --------->AHL20(2)               ------>ZmHOX2a(1) ----------->GT1--------->AtLEC2   ctgattgtgttttcacacttatttattacttacacaaacaaatgtgtctgtgtccttctcagagttacaggcatgaaaaaagaaaccatgaaaaggtaca  11152400                <---------AHL20(2)                --------->AHL20(2)              --------->AHL20(2)           --------->AHL20(1)           <---------AHL20(1)          --------->AHL20(2)       <---------ICU4   <---------AHL20(2)   --------->AHL20(2)  <---------AHL20(2)  --------->AHL20(2) ------->AHL20(1)                                       <---------At5g28300 --------AHL20(2)                                  <---------DAG2 --------AHL20(1)                                  <---------------AGL15 ------->AHL20(2) <---------AHL20(2)               <----------DOF2 -TEIL <---------AHL20(2)               ---------->ID1 <-----------GT1                             <- ->GT1--------->AHL20(2) ------->TEIL <-----------RAV1(1)                    --------->ANAC55(2)----- ---->AtSPL8  <---------AHL20(2)  <----------DOF2  --------------->AGL15  <-------TEIL          <---- -----AtSPL8--------->AHL20(2)    <---------DAG2<-----------GT1      --------->YAB1--------->ARR11(3)   ataaattaataaatatatatatatatgtatgttaggctttttgttgttttttactttttacagtgactcactcatgttcatgtaataccttgttttgttt  11152500                                                           --------->ANAC58           --------->ATHB12                                --------->ANAC46          <---------YAB1                                   --------->ANAC58           --------->ICU4        <---------CCA1(2)    <-----------GT1               --------->ANAC55(2)   --------->ANAC58  <---------YAB1            <-----------GT1              <-----------GT1         --------->ANAC58 --------YAB1              <---------AHL20(2)          --------->CCA1(2)        --------->DAG2 ---->AHL20(2)   --------->ARR14(2)                   --------->ARR14(2) <----------DOF2 -----AHL20(2)   <---------ARR14(2)      <-----------RAV1(1)     <-------TEIL  ---------->DOF2<------   tattattcttatatcattggattcgaaatttaaacttcccaaaatgttgcaaatcagatttacgaaatacattctctttcgaaaagcaatgtttagcttt  11152600                                                                             <---------YAB1                                                                           <---------ICU4                                                                           -------->HAHB4                                                                           --------->YAB1                                                                          --------->ICU4                               <---------ANAC55(2)                     <---------AHL20(2)                           ------>MYB46(1)                             <---------YAB1                           ------>MYB83  <-----------GT1               --------->AHL20(2)                           <-----------HVH21--------->TOE2(3)  <---------ARR11(3)                   <--------P  --------->ANAC55(2)             --------->ARR11(3) ----DOF2         ----------------------->TaNAC69(2)      --------->ICU4--------->YAB1    <----------DOF2   tggattttgtgatttggactggttagacctatcacttgtctaataacctctataacagaacttattatcttatataattatgacaaggttttctttctaa  11152700  Previous    Next  AGI:  At2g26180.1    Description:  IQD6 (IQ-domain 6); calmodulin binding. similar to IQD8 (IQ-domain 8), calmodulin binding [Arabidopsis thaliana] (TAIR:AT1G72670.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83680.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048) Range:  from: 11150368    to: 11152181    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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