Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <---------ARR14(2)                       --------->ARR14(2)                       --------->ARR11(3)                       <---------ARR11(3)                                                           <                  ----------->RAV1(1)                           <------ZmHOX2a(1)                ----                <---------At4g35610                          --------->HSFB2a(2)           <---------AtMYB61 --->ZAT14      --------->At4g35610------>ZmHOX2a(1)         <---------HSFB2a(2)   <---------AHL20(1) --GT1<---------ALFIN1 <---------GLK1(2)               <---------GLK1(2)           <---------ARR11(3)   tctcttctccactcttgcagcaccagattttgtcatcctgtccgactgcgaaaatcagattgtctaggaaaacaactctagacaatatatgtgatggtcc  11146100           --------->ANAC58           --------->ANAC58                                  --------->ARR14(2)           --------->ANAC46                                  --------->GLK1(2)       ------>MYB83                                          <---------ARR11(1)       <-----------HVH21              --------->CCA1(2)      <---------ARR14(2)       ------>MYB46(1)               --------->AHL20(1)      ------->TEIL     <---------MYB59       <---------ANAC55(2)      --------->ATHB12                   --------->ARR11(3)    --------->ANAC55(2)    --------->ANAC55(2)    <---------TOE1(2)     --------->TOE1(3)        ----  <-----------GT1     <---------AHL20(2)       <---------ANAC55(2)      --------->TOE2(3)        <--- ----------DOF2      --------->AHL20(2)    ------->TEIL     <---------CCA1(2)        --------->DAG2 -->ZmHOX2a(1)<---------ANAC46      --------->AHL20(2)      <---------ARR14(1)     ---------->DOF2<--   ttctttacctatcacgccttgtattaaatacttatcaaatatatgaatctcgtaagattggcgaatctctgaaacctcaaatttcaaaaggtctagggtt  11146200                           ---------->DOF2                 --------->ATERF1(1)                <---------ZAT2                --------->At4g35610          <--------P   ---------->DOF2                                 <------MYB46(1)  ----------->HVH21 <------NtERF2                                      <------MYB83 ----->MYB52(2) <---------At4g35610                    <---------ARR14(2)                ------>ZmHOX2a(1) ------MYB46(3) --------->ZAT2                         --------->ARR14(2)   <---------YAB1 -----GAMYB   <------ZmHOX2a(1) <----------ID1 --------->YAB1         --------->MYB59   --------->TOE2(3)   tgttgtgaaggggttaggagctggcgaaagaaaggagacaagagattaatcttactggattcagagacttgtttggttctgatcagccatcctttgtaag  11146300                                 <---------ANAC46                                                  <-                                 --------->ALFIN1                                                 <--                           --------->DAG2                                                --------->ARR11(3)                          ---------->DOF2                                  <---------HSFC1(2)    ----                    --------->ANAC58                                       --------->HSFC1(2)    ====                    --------->ANAC55(1)                                    <------MYB83  <---------ARR11(3)                    --------->ANAC46                                       <------MYB46(1)     <-----                    --------->ANAC58                                       <---------HSFB2a(1) <-----                   <---------LBD16<---------MYB46(3)                <------ZmHOX2a(1)---------->DOF2             ----------->GT1   <---------MYB46(3)           <-----------RAV1(1) <---------AtLEC2 <---          ------------>AtMYB77--------->ALFIN1         --------->YAB1      --------->HSFB2a(1)<------   aacatgaagaagggccagttacacggaagaaagtggtgggagagagaacagtctctatcatcttgttggaggaaggaaggttgcattgaaagctcttcgg  11146400          <---------SPL7         --------->DEAR3(1)        --------->RAP2.3(1)        <------NtERF2        --------->ATERF1(1)       ------>NtERF2       <---------ATERF1(1)       --------->LBD16       --------->At4g35610      --------->ATERF1(2)      --------->DEAR3(1)      <---------ATERF1(2)      --------->RAP2.3(3)      --------->RAP2.3(2)      --------->RAP2.6(2)      ------------------>SPL14      ------->GAMYB     --------->RAP2.3(1)     --------->DEAR3(2)     --------->ATERF1(1)     --------->ERF1     --------->MYB46(3)                        --------->ANAC46     --------->RRTF1(1)                        --------->TGA1a     --------->RAP2.6(1)                       --------->ANAC58    <---------ATERF1(1)                        --------->ANAC58    <---------ZAT2                             --------->bZIP60(1)    <---------At4g35610                        <---------bZIP60(1)    ------>NtERF2                              <---------TGA1a    --------->At4g35610                        =====================================MYC_MYB    --------->ZAT2                             --------->bZIP60(2)   --------->DEAR3(1)                          <---------TGA2(1)            <-------GAMYB  --------->ATERF1(1)                        <------ZmHOX2a(1)              --------->At5g28300 -----NtERF2                            --------->ANAC46                   ----------->GT1 ---------HVH21                        <---------LBD16                     <---------MYB46(3) ----->ALFIN1--------->ANAC46        <---------REM1(2)           --------->MYB52(1) ===========================RAV   <---------ANAC55(2)        <------ZmHOX2a(1) ----ANAC58  --------->ANAC58     <---------ANAC46    --------->MYB52(1)  <---------ANAC46 ----ANAC58  --------->ANAC58     ----------------------->TaNAC69(2)      <---------RAP2.6(2)    ---- --------RAV1(1)<-----------RAV1(2)  <-------TEIL--------->TGA2(2)       <---------LBD16        ----- ---DEAR3(1)--------->SPL7 <---------At4g35610 --------->TGA2(1)<---------ARR14(2)             <-----   tgtcgcagccgccgaacgccagggtttacagatgctacgtacacggaggacgtcactaatggaggagaaacggtttgcggttaaattgatgaggtctcca  11146500        <---------ZAT18    <----------DOF2          <---------ANAC58                         --------        --------->ZAT14    --------------------->WRI1                               <-----------GT1 ----->ANAC46       <-----------GT1          <-----------HVH21                   --------->YAB1    -- ---->LBD16  <-----------RAV1(2)   --------->WOX13(1)                --------->ANAC58        -------- ------RAV1(2)<---------TOE2(2)  ------------>CBF   <---------ANAC58 --------->ANAC58      <---------   ggtaattcagaccactcaggtttttccatctttgaatcaatcgacgatgtgagagcgtgatcaacatcggctcgccctctctgttataactccatatata  11146600                                         --------->At4g35610                                    --------->O2                                    <---------ANAC46                                    <---------ANAC55(1)                                    --------->ANAC55(2)                                    <---------ANAC58                                           ------                                    <---------ANAC55(2)                                        <-----                                    <---------ANAC58                                          <------                                    <---------O2                                              <------                                    <---------TGA1a                                           <------  ----------->RAV1(1)               <---------bZIP60(2)                                       ------- --------->ANAC46                   --------->TGA1a                                           ------- ->AHL20(2)                        <<<<<<<<<NAP                                          --------->YAB1 ------->ANAC46      <---------ARR11(3)  <---------ANAC46         ------>ZmHOX2a(1)     <---------YAB1 --->TBP             <---------GLK1(2) --------->ZAT18    ------------>CBF<---------GLK1(1)   <------ --TBP   --------->TOE2(3)    <------ZmHOX2a(1)     --------->GLK1(2)    <---------GLK1(2)    -------   tacacaacaaaacttaaaccctagatacttgaggacttacgtgggctggactagaatccatccaattcctagttggattttcgattagctattatcacgt  11146700                                                                       <------------CBF    --------->ARR14(2)                                                --------->ATHB51    <---------ARR11(3)                                                --------->ATHB12    --------->ARR11(3)                                               <---------YAB1    <---------ARR14(2)                                             <---------ICU4 ->MYC3                                                            --------->YAB1 --MYC3                                   ------------>CBF         -------->ATHB1 ---O2                            <---------YAB1                  <---------YAB1 ---ANAC46                       <------------CBF                 --------->ICU4 ---ANAC55(2)                   --------->ATHB51                  <---------AHL20(2) -->ANAC55(2)                   -------->ATHB1                    --------->AHL20(1) -->TGA1a                      <---------YAB1                     --------->AHL20(2)        --------- ---TGA1a                    <---------ZAT6   --------->ICU4    <---------ICU4   --------->ICU4 -->O2             <------------CBF<-----------RAV1(1)   ----------->GT1     ------------>CBF      <-   gagtaatatctgcattacatgtattgacttagtattattgttggagcaatgttttttttttgttaaaaattattattggagcaatgttttgtttttgtta  11146800  --------->ATHB12  <---------AHL20(2)  --------->ATHB51                                                                               <---  --------->AHL20(2)                                                                             ---- <---------AHL20(2)                                                <---------CCA1(2)            ----- -->GT1  <---------At4g35610         <---------YAB1              <---------ANAC58      <---------AtMYB61 --------ICU4      ---------->DOF2 --------->YAB1                <---------ANAC58    <----------DOF2   aaaattatttgagcaaaccaaaaaatcgcagaatgaattataaaacagttcgtatttcgatgaaatttcgtctctccctctcaatagctttggtgcaaat  11146900                                                                           --------->ANAC55(2)                                                                           <---------ANAC55(2)                                                               ----------->GT1                                                       --------->ARR14(2)  --------->ANAC55(1)                                                       <---------ARR14(2)  ----------->GT1                                                       --------->ARR11(3)  --------->ANAC46         < ------AHL20(2)                                        --------->GLK1(2)   --------->ANAC58   ------- ----->AHL20(2)                                        <---------ARR11(3)  --------->ANAC58 --------- ---->AHL20(2)<-------TEIL  --------->ZAT6        ----------->GT1----------->GT1       ---------->DOF2   taatacccttactacatacatgtcaacttaactctaattctaacaaatagaacagaaaatctggagagagaaaaaaaacgtaactagatgaaagaaaaga  11147000  Previous    Next  AGI:  At2g26160.1    Description:  Identical to F-box protein At2g26160 [Arabidopsis Thaliana] (GB:Q1PEZ8;GB:Q8S8P1); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G25750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47506.1); contains InterPro domain Protein of unknown function DUF295 (InterPro:IPR005174); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 11145056    to: 11146529    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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