Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <---------ANAC58          <---------ANAC58          <---------ANAC46          <---------O2          <---------bZIP60(2)          <---------TGA1a       ----------->HVH21     <------MYB46(1)     <------MYB83----------->GT1     --------->ANAC55(2)                <---------ARR11(3)       ---------->DOF2     --------->At4g35610          --------->YAB1               ------>ZmHOX2a(1)     <---------ANAC55(2)  --------->WOX13(1)                  --------->TOE2(3)    --------->MYB59      <---------AHL20(2)                --------->GLK1(2)                 --------    --------->MYB46(2)   --------->AHL20(2)               <---------GLK1(2)           <------NtERF2 -------------AGL15     --------->AHL20(2)          --------->GLK1(2)              --------->ZAT18 <-   caaaattaggtgacttgggtagtcaaataaatcaaatgacaatatcacagagacaatctagaatcctaaaagacaacattttgagggcagagaagaattt  11142000                                               <------ZmHOX2a(2)                                              <---------ARR11(3)                                              <---------AGP1                                              --------->ARR14(3)                                              <---------ARR14(2)                                  <---------YAB1  ----------->GT1                              <---------ANAC58--------->ARR14(2)        <---------YAB1                              <---------ANAC58<---------ARR14(3)      <---------ICU4                         <----------DOF2      --------->AGP1          -------->ATHB1                       <---------YAB1         --------->ARR11(3)      --------->YAB1            -----                   --------->ARR11(3)       ----------->ARR10        --------->AHL20(2)         <----                   <---------ARR11(3)     ---------->DOF2            <---------AHL20(2)       ------- <----------DOF2  --------->CCA1(1)    --------->YAB1          --------->YAB1            <---------ARR14(2) ->GLK1(2) ----------->GT1   <---------At4g35610------>ZmHOX2a(2)    <---------ATHB51    --------->ARR14(2) --------At4g35610--------->RVE1(1)  ------->TEIL <---------YAB1     --------->ICU4  <------ZmHOX2a(2)   gagcttctagggtttgaaaaatatcatctttagcttatgaatcacaaagatcttgataaaacccatcagaaattattatctaattagatcaaatccacta  11142100                                                                                               ------                                                                                               ------                                                                                               ------                                                                                          --------->RAP2.3(3)                                                                                          --------->DEAR3(1)                                                                                          --------->RAP2.3(2)                                                                                         --------->RAP2.3(1)                                <---------AHL20(2)     <----------ID1                    --------->ATERF1(1)                          <---------ANAC58             ----------->GT1                  <---------RAP2.3(1)         ---------->DOF2  <---------ANAC46           ----------->GT1                    ------->TEIL      >>>>>>>>>>MYB80     <---------ANAC58         ---------->DOF2                      <---------ATERF1(1) ---->ZAT14              ---------->ID1         <----------ID1                    <---------YAB1 -----ZAT14          <----------DOF2        --------->DAG2                        --------->ICU4    < -->ANAC46          --------->TOE2(3)      ---------->DOF2                --------->TOE2(3)------>NtERF2   cagtatcaaaccaaagtcgaaacctttttcgtattaaaaattggataaaggggaaaagagaaaaatgaaacaaaaaccttggtgatgatgcgcctccaag  11142200        <-----------ARR10 --------->TOE2(3)       <---------CCA1(2)<---------ARR11(3)     --------->YAB1     --------->ARR11(3)    <---------ATHB12   --------->GLK1(1)                         ------>ZmHOX2a(1)  --------->WOX13(1)   <---------GLK1(1)                     <---------ARR14(2) --->ANAC46         --------->ANAC58                         --------->ARR14(2) --->ANAC58         --------->ANAC58                        <---------HSFC1(2)                      < --->ANAC58         --------->ANAC46                        --------->HSFC1(2)                   <--- ---------ATHB12------>ZmHOX2a(1)     <---------ZAT6        --------->HSFB2a(1)     ---------->DOF2 <   ccatcaatcaaatctctccttcacgatatcttaaaaattggtgttaatgtctgataaatcgaagttcctcgatctatatcggaaacaaaagacttcttcg  11142300                                                            <-----------HVH21                                                            <-------MYC3                                                            ------->MYC3                                                            ------->MYC2                                                            <-------MYC2                                                           --------->ANAC46                                                           <---------TGA1a            <---------ARR14(2)                             --------->ANAC55(2)            --------->ARR14(2)                             <---------O2    <------MYB46(1)          ----------->ARR10                                <---------ANAC55(2)     <---------LBD16              ===================================bZIP_DOF ---------ANAC46                  ---------->DOF2          --------->TGA1a <------MYB83 ------MYB52(1)         --------->TOE2(3)                  --------->O2   --------->MYB59           - ---------YAB1          --------->YAB1         --------->ZAT6           <---------MYB52(1)          <   ttgtgtttggggaagaaccgttctaatcttattccctaaagtcttaaaaacactaaattacacgtgagagacctgtttggttatcgggtgagagaaaaat  11142400                                                                                                    <                                                                                                    <                                                                                                    <                               <------MYB46(1)                                                      -                               <------MYB83                                                         <                --------->ANAC46                                            <---------AHL20(2)      -        --------->ALFIN1--------->ARR14(2)                               <--------ATHB1            <-       <-------PIF5     <---------ARR11(3)                               <---------ICU4            --       ------->PIF5 --------->ANAC58                                     --------->ATHB51          <-      --------->At4g35610--------->CCA1(2)                              <---------ATHB51           <-      --------->ZAT2--------->ANAC58                                    <---------ATHB12           <-    <-----------RAV1(2) <---------ARR14(2)                              --------->ICU4             <-   <---------ZAT2   --------->ANAC46<------NtERF2                   ------------>CBF               <-   <---------At4g35610  --------->ARR11(3)                         --------->ANAC58                <-  ----------->RAV1(1)  *TSS   --------->MYB59 <-------TEIL         --------->ANAC58               --- -------->ZAT18 --------->ANAC58  <---------DEAR3(1)               --------->ANAC46             <---- ---------ZAT18 --------->ANAC58<-----------HVH21               --------->KAN4(2)         <----------DOF2   tgtgcagcaggtggagacacgcacgagatatgtaggtcgcctcttaagtacataaatacccttggacatacccaataattcattttagtaggctttttct  11142500            ---------->DOF2         --------->AHL20(2)       --------->TOE2(3)    <---------ALFIN1    ----------->RAV1(1) <---------PCF5 ------>NtERF2 --------->ATERF1(1) <------NtERF2 <---------ATERF1(1) --------->PCF2 ---------RAP2.3(1) ---------ATERF1(1) ---------ERF1 ----->NtERF2 -----------TCP11(1) -------->RAP2.6(2) --------RAP2.6(2) ------->ATERF1(2) --------RAP2.3(2) --------RAP2.3(3) --------ATERF1(2)                                                                             ------ --------ANAC58                --------->AHL20(2)                                             <------ --------DEAR3(1)         <<<<<<<ZML2                                              <---------AHL20(2) --------ANAC58        --------->HSFB2a(2)                                     --------->AHL20(2) ------>RAP2.6(3)      <---------HSFB2a(2)--------->TOE2(3)             <---------YAB1  ---------->DOF2 -------RAV1(1)    <------ZmHOX2a(1)    <------NtERF2        ---------->DOF2   <---------AHL20(2)   ggcggcccacattaaaaagaaggacctagaacataaattggcatcgttagaaatgggcttaagtaaaggcccatatgatatatatataaaaaaagagatt  11142600                                             ------->MYC4                                             ------->MYC2                                             <-------MYC3                                             ------->PIF4                                             <-------MYC4                                             <-------PIF4                                             ------->MYC3                                             ------->PIF5                                            --------->bZIP60(2)                                            <---------TGA1a                                            <---------O2                                            --------->TGA1a                                            --------->O2                                            <---------ANAC55(2)                                            =============================bZIP_DOF                                            --------->ANAC55(2)                                           ------>NtERF2                             <---------ANAC58<-------PIF5                  --------->HSFB2a(2)     <---------ALFIN1                  --------->HSFC1(1)      <------------OsbHLH66                  <---------HSFC1(1)     <------NtERF2                  <---------HSFB2a(2)   <-----------------PIF3(1)                --------->ZAT14                 <---------LBD16        ------>NtERF2                            <---------ZAT14               --------->GLK1(2)       --------->ETT(2)                     <---------ZAT14             <---------HSFB2a(1)      ---------->ARF1                  ------------>CBF  ------>ZmHOX2a(2)             --------->HSFC1(2)       ---------->ID1                <---------HSFC1(2) --------->ARR11(3)       --------->MYB52(1)    <---------ANAC58<-------MYC2           --------->HSFC1(2) <---------ARR11(3) --->GLK1(2) --------->HSFB2a(1)  <---------ANAC58            ---------->DOF2 ----------->GT1 <------ ---GLK1(2)  <---------HSFC1(2)   <---------ANAC58         <-----------HVH21--------->ZAT14   <------   ctagattagtaacgaagtttctggaacattgtcttgtcttgtcgccacgtgctcacataaatgtcaaagaagcttcaatacagtgaaatgatcttgtctt  11142700       --------->HSFC1(2)       --------->HSFB2a(1)                                  *TSS       <---------HSFB2a(1)                         ------>NtERF2       <---------HSFC1(2)                         --------->ANAC46     <<<<<<<ZML2                                  --------->ANAC58  --------->HSFC1(1)                              --------->ANAC58  <---------HSFC1(1)                              <---------ALFIN1  <---------HSFB2a(2)                           <---------ALFIN1  --------->HSFB2a(2)                 <-----------GT1 ------------>CBF ---ANAC58                  <---------ICU4    ------>ZmHOX2a(1) ---ANAC58                 <---------YAB1    --------->ANAC46                             ---------->DOF2   gtctctagaaccttctcttctctccccttataatttcatttctctctcctccacgcctcaatctctcaactcaaaactcaacattttctgaagaaagtcg  11142800                                                                              <-------TEIL                                                                        --------->ANAC58                                                              <---------HSFC1(1)                                ----------->RAV1(1)           --------->HSFC1(1)                      --------------->AGL15                   <---------HSFB2a(2)                      <---------------AGL15                   --------->HSFB2a(2)                     <-----------------AGL2          <----------DOF2    --------->ANAC58                     ----------------->AGL3    <---------ARR11(3)       --------->ANAC55(2)        --------->ANAC46       <----------ID1  --------->ARR11(3)       <---------ANAC55(2)  <-------  <---------DAG2     <-----------------AGL3   --------->RVE1(1)       <-----------GT1      <---------ANAC58  <----------DOF2    ----------------->AGL2   --------->CCA1(1)  ---------->DOF2           <---------ANAC58   caaactttacccaaaacccagtttctaattttagcaacaaaatcaaaaatatctacttttgtttctcgaaagttacgaaattcatacaatctagcttatc  11142900  Previous    Next  AGI:  At2g26140.1    Description:  FTSH4 (FtsH protease 4); ATP-dependent peptidase/ ATPase/ metallopeptidase. similar to FTSH11 (FtsH protease 11), ATP-dependent peptidase/ ATPase/ metallopeptidase [Arabidopsis thaliana] (TAIR:AT5G53170.1); similar to ftsH-like protease [Pisum sativum] (GB:CAG25608.1); similar to putative FtsH protease [Lycopersicon esculentum] (GB:AAP32310.1); similar to hypothetical protein OsI_002481 [Oryza sativa (indica cultivar-group)] (GB:EAY74634.1); contains InterPro domain AAA ATPase, conserved site; (InterPro:IPR003960); contains InterPro domain Peptidase M41, FtsH; (InterPro:IPR005936); contains InterPro domain Peptidase M41; (InterPro:IPR000642); Range:  from: 11138656    to: 11142423    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g26150.1    Description:  ATHSFA2 (Arabidopsis thaliana heat shock transcription factor A2); DNA binding / transcription factor. Identical to Heat stress transcription factor A-2 (HSFA2) [Arabidopsis Thaliana] (GB:O80982); similar to AT-HSFA6B (Arabidopsis thaliana heat shock transcription factor A6B), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G22830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43809.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterPro:IPR000232) Range:  from: 11142760    to: 11144474    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version