Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  -------->ATHB1                <---------ICU4               <---------AHL20(2)                           --------->ALFIN1               --------->ICU4                            <---------DEAR3(1)      ----------->GT1                                   <---------LBD16     --------->DAG2                                  ----------->RAV1(2)                            -   ---------->DOF2<---------YAB1           --------->AHL20(2)                       <----------ID1 <-  <---------AHL20(2)                       <---------AHL20(2)--------->ABI4(2) --------->YAB1      <- --------->AHL20(2)          <---------AHL20(2)   ------->TEIL                <---------AHL20(2)   -- <---------AHL20(2) ---------->DOF2 --------->TOE2(3)--------->At4g35610     --------->AHL20(2)  ---- --->YAB1      <---------ATHB51   <-----------GT1 <-------TEIL    --------->ZAT6  --------->YAB1 ---- ---ATHB12     --------->AHL20(2)<---------AHL20(2)  <---------At4g35610  --------->AHL20(2)   <-----   aaattaaaaggtaacaaattattaaagacatatatttaacttaatttaaatgtacatctgcggtgctagcactagtttatataataagaacaaaaaacct  11109000    --------->AHL20(2)    <---------AHL20(2)     --------->GLK1(2)   --------->AHL20(2)   <---------TOE2(3) -------->ATHB12     --------->AHL20(2) --------YAB1    <---------AHL20(2)                                 <---------AHL20(2) --------ATHB12  --------->AHL20(2)                              <---------AHL20(1) ------->ICU4    --------->AHL20(1)                              --------->AHL20(1)--------->YAB1 -->MYB83        <---------AHL20(1)                       ----------->GT1         ----------->GT1 -->MYB46(1)    --------->AHL20(2)                      <---------ANAC58<---------YAB1   <---------AHL20(2) ----MYB59      <---------AHL20(2)                      <---------ANAC58<---------AHL20(2)   --------   aatgatttaatttgaaaaataaatttaagaatatgaccttcgagttctaagaaaattagcttgttaatattttttttattagaaatgaaaatttatctta  11109100                                                     <---------AHL20(2)                                                  --------->ARR11(3)                                                  <---------AHL20(1)                                                  <---------ARR11(3)                                                  --------->AHL20(1)                     <---------AHL20(2)                <---------ARR11(3)              <---------ARR11(3)                       --------->AHL20(2)           ------>ZmHOX2a(1)                    --------->ARR11(3)                      --------->AHL20(1)     <---------ARR11(3)                         --------->AHL20(1)                      <---------AHL20(1)     --------->ARR11(3)                    ----------->GT1                              --------->AHL20(2)     <-----------ARR10    <-----------GT1--------->CCA1(2)                              <---------AHL20(2)    --------->RVE1(1)  <-----------GT1  --------->ARR11(1) --------->AHL20(2)       <---------AHL20(2) --------->YAB1 --------->ARR11(3)      <---------ARR11(3) <---------AHL20(2)      --------->AHL20(2) ->TOE2(3)--------->TOE2(3)     <----------DOF2 <---------AHL20(1) ----------->GT1 <---------AHL20(2)   gaataaaaatctcctcaatatctattttcaacctctttcaaagatttgaaaatattttttttttaatattagtaaataaaactaattaaataaaattaga  11109200                                                                                             ------>MYB46(1)                                                                       --------->AHL20(2)  <---------MYB59                                                               --------->DEAR3(2)   --------->ANAC58                                                              <---------At5g28300   --------->ANAC58                                      --------->TOE2(3)       --------->SPL7  <-----------GT1------>MYB83                                   <-----------GT1        <---------------AtSPL3   ------->TEIL                            <---------TOE1(3)             <---------------AtSPL8 ------->GAMYB                            <---------TOE2(3)             --------------->AtSPL8<---------MYB52(2)                        <----------DOF2                <---------YAB1 --------->AHL20(2)--------->MYB52(1)           <-----------GT1 ---------->DOF2        <----------DOF2------>NtERF2--------->MYB52(1)   aatcaaattgattttacttaaaaacactttaaagtttaaacctctaatctagcttttatttttgtaccgccattaaaaaataacgaacccaaaccgaact  11109300                                                                                               <-----                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                          -----------                                                             --------->ARR14(2)          <-----------HVH21                                                             <---------ARR14(2)         --------->ANAC46                                  --------->ANAC58    ----------->HVH21                 <---------At4g35610                                  <---------YAB1  <---------ANAC58             *TSS   ===============                                  --------->ANAC58<---------ANAC46        --------->YAB1--------->At4g35610                               <---------ATHB12   <---------ANAC58 <------------CBF   <-----------RAV1(2)   caaacccagacccaaacccatgcccatacacaaatcacgaatgcctaggcttacttgtgaccgaaaccgaattgaatcatatatagtttcaggtcacctg  11109400          --------->ZAT14          <---------ZAT2          <---------At4g35610          --------->At4g35610 ------RAV1(1)                                                     <-----------HVH21 ->ANAC55(2)                                --------->HSFB2a(2)    <-----------TGA1 --->RAV1(2)         ---------->DOF2        <---------HSFB2a(2)   <---------ANAC58 --At4g35610 ---------->CDC5               <---------LBD16        <---------ANAC58 >HVH21   <---------ZAT14               <----------DOF2--------->HSFB2a(2)                  <-------- ======RAV--------->ZAT2         <----------DOF2       <---------HSFB2a(2)                  ---------   ttgcacaatctctgctcagccctaaaagcttactcctttcaactttctggaggccttctcgtagcctagcgtcatagatggatttgatggagaagaactt  11109500                                                                                 <---------DEAR3(1)                                                                                <------NtERF2                                                                               ------>NtERF2                                                                              --------->DEAR3(1)                                                                              ----------->HVH21                                                                             --------->RAP2.3(1)                                                                  <-----------ARR10                                                     <---------ANAC58      --------->ANAC58                                                    <---------ZAT2<---------ARR14(2)                                                    --------->ZAT2--------->ARR14(2)             <---                                     ------>ZmHOX2a(2)     <---------GLK1(1) --------->DEAR3(2)  <---            <-------TEIL            <------ZmHOX2a(2)<---------ANAC46      --------->ANAC46    ------   --------->MYB52(2)              <---------ARR14(2)<---------ANAC58      --------->ANAC58   <------ -ARR11(3) --------->GLK1(2)  <---------ALFIN1  <---------ANAC58 <---------CCA1(2)       <-----------GT1 >ARR11(3)<---------ARR14(2)----------->RAV1(1) <---------ANAC58 <---------MYB52(1) --------->ALFIN1   ggagttagtggagattcagaaactagaaggccacaccgatcgtgtttggagcgtagcttggaaccccgtttcttctcacgccgacggtgtttcaccgatt  11109600                                --------->TOE1(2)                       <---------ARR11(3)         -- <---------ANAC58             <---------ARR14(2)                        --------->ARR11(3)         -- <---------ANAC58             ------->TEIL                          <---------AtLEC2           ------ ------ANAC58                 --------->ARR14(2)            --------->LBD16                    ------ ------ANAC58             <-----------------AGL1            --------->HSFB2a(2)                ------ --->GLK1(2)        --------->ZAT6      ---------->DOF2     ------>ZmHOX2a(1)             <----------DOF2 ---GLK1(2)--------->ALFIN1   --------->GLK1(2)           ----------->RAV1(2)       <---------CCA1(2)   cttgcttcttgcagtggcgataacactgttcgaatctgggaacaaagctctctctctcgctcctggacttgcaaggtctctatctcatttctctttctcg  11109700             <----------DOF2            <---------DAG2        >>>>>>>ZML2     --------->ARR11(3)   --------->HSFB2a(1)   <---------HSFC1(2)   <---------HSFB2a(1)   --------->HSFC1(2)     --------->STY1(2) ---------->DOF2          <---------STY1(2) ------->ANAC58          ------>MYB83                         <---------AGP1 ------->ANAC58          ------>MYB46(1)             <---------GLK1(2) --->ANAC46<-----------------AGL3            --------->ARR11(3)              <---------YAB1 --->ANAC58<-----------------AGL2            --------->GLK1(2)<---------ARR11(3) --->ANAC58----------------->AGL1            <---------ARR11(3)<------ZmHOX2a(2)              <------   caagaaagttctagccttttttggacctagcaagttcaattcacaaaaatctattgattctctagatcagtcttacattacaatttgtgggttttgtttc  11109800                                                                              <---------ANAC58                                                                    <---------ANAC46                                                                   <---------MYB52(1)                                                                  <-------GAMYB                                                                  <---------ZAT14                                                                 <-----------RAV1(1)                                                              <------ZmHOX2a(1)              <-------                                                         <---------ANAC46     <---------ANAC58      -                      --------->TOE1(3)             --------->CCA1(2)       --------->ARR11(3)      <                   <---------WRKY18(1)             --------->ARR14(2)   <---------MYB52(1)   <-------     ---------->DOF2  --------->TOE2(3)            <---------ARR14(2) <---------ZAT6         -------- -----GT1     <-----------GT1            ----------->GT1 <---------REM1(1)--------->MYB52(2) --------   gattcactaaagagattaacttgaccttaaacatggaatcgactggtgatttggatatggtgtaggactgttgtgttagttcttgtgctatttctctaga  11109900  Previous    Next  AGI:  At2g26060.1    Description:  EMB1345 (EMBRYO DEFECTIVE 1345); nucleotide binding. similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT4G32990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15913.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 11109379    to: 11112433    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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