Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <---------At5g28300                           <-----------GT1                 ----------->GT1                ----------->GT1                                                                    <-          <---------------AGL15                                     <----------DOF2                <-         <-----------------AGL1          <-----------GT1           <---------DAG2          <---------YAB1         <-----------------AG-------->ZAP1                      <-----------GT1         <---------ATHB51    --------->ALFIN1       <---------WRKY18(1)       --------->AHL20(2)                 --------->ICU4   ctaggggtgatgctcaaatcggaaaattttgaccgcttagttttatcttgttcatatatatagttttcacctttcaaaaattttgcacaaattatgaaat  11095900                                                              --------->MYB52(1)                                                             ------>ZmHOX2a(1)          <---------YAB1                                                           ----------------->AGL1      <---------AHL20(1)                                                       <----------DOF2             <---------AHL20(2)                                                   <---------ZAT14       --------->RVE1(1)                        <---------AHL20(2)         --------->ZAT14      --------->GLK1(2)           <---------YAB1                       ------>MYB46(1)         --------->ARR11(3)         --   --------->ZAT6      --------->ICU4           ------>MYB83<---------MYB59       --------->AHL20(2) --------ANAC58    <---------ARR11(3)         <---------MYB111(1)----------->GT1  <---------AHL20(2)- --------ANAC58  <---------TOE2(3)  <-----------HVH21  <---------DAG2   <---------ARR11(3)         <-   agcttacactattactatcaaggtatttattcgacgaaggtcagactaccaactacacttttcctaactgtgaaaatctctgaatttaatatacttgtgt  11096000                                                              --------->AtLEC2                                                              --------->ANAC58                                                              --------->ANAC58                                                          <------NtERF2                                                         ------>NtERF2                                                        ------->GAMYB                                                        --------->RAP2.3(3)                                                        --------->RAP2.6(2)                                                       --------->RAP2.3(1)                                                       --------->ATERF1(1)                                                       --------->DEAR3(2)                                                       --------->MYB46(3)                                                      ------>MYB46(1)                  ------>ZmHOX2a(2)                   ------>MYB83                 <------ZmHOX2a(2)                    --------->At4g35610                <---------ARR11(3)                    --------->ZAT2                --------->ARR14(3)                    <---------At4g35610                <---------ARR14(3)                    <---------ATERF1(1)           <---------TOE2(3)         <------MYB46(1)                             --------->ANAC46            <----------CDC5         <------MYB83                              --------->MYB46(3)  ---------->DOF2     --------->TOE2(3)      <---------ANAC58        ------->TEIL       <-----------GT1   --------->ANAC58 <---------TOE1(3)      <---------ANAC58   <---------ANAC58    --------->At4g35610   --------->ANAC58 <---------TOE2(2)      <---------ANAC46   <---------ANAC58    <---------At4g35610 ---------->DOF2--------->At4g35610 ------->ICU4   --------->ARR11(3)      --------->ANAC58--------->RAP2.3(2)    --------->RAP2.6(2) -------->ATHB12<-----------ARR10       --------->ANAC58--------->DEAR3(1)   --------->At4g35610----- --------YAB1 ----------->ARR10         --------->ANAC46--------->ATERF1(2)  <---------At4g35610<----   aactattggcttggttaagatcttatttcttgcatcttgtccaagtcagattaaccagccgcccatgcaaagccaaagcagccgcttaggttacattaga  11096100                                                               <----------DOF2                                                         ------>ZmHOX2a(2)                    <------                                                       --------->AGP1                         <------                                                       --------->ARR14(3)                  --------->ALFIN1                                                       <-----------ARR10                 <---------ANAC58                                                       <---------ARR14(2)                <---------ANAC58                                                       <---------AGP1                    <---------TOE1(1)                                                       --------->ARR14(2)               --------->SPL7                                                       <---------ARR11(3)               ------->TEIL                                                       --------->ARR11(3)               <-------TEIL                                                       <---------ARR14(3)             <---------SPL7                                                     ----------->ARR10               <---------ANAC46                              --------->ANAC46  --------->ANAC46                     <---------ANAC58                    <--------P--------->ANAC58  --------->ANAC58              --------->HSFB2a(2)   <      ----------->GT1         --------->ANAC58  --------->ANAC58 --------->AHL20(2)  <---------ANAC58 ---->ARR11(3)    ----------->GT1           --------->YAB1 <---------CCA1(2)  <---------HSFB2a(2)   - -----ARR11(3) <-----------RAV1(1)        <---------YAB1<------ZmHOX2a(2) --------->At4g35610 <------   tattgagagagaaaaatatgtggtagataaacaagccatcaactattaataagccaagatcttatcttttaatattagctcgagaaggcgtacgtggtgt  11096200             <-------TEIL          ----------->GT1                                                             --------->ARR11(3)         <---------------AtSPL8                                          ----------->TBP     <-----------RAV1(1)                                                 <---------YAB1 ------>ZmHOX2a(2) ---ANAC58<---------ANAC46          --------->AtLEC2                   --------->YAB1 <---------ARR11(3) ---ANAC58<---------ANAC58     <-----------GT1                        <---------YAB1<-------TEIL ---------AHL20(2)       <---------MYB52(1)                    <---------ICU4      <--------P  <----- -------->AHL20(2)       <---------YAB1      ----------->GT1   <--------HAHB4   <---------TOE2(3) ---ANAC46<---------ANAC58  <---------------AtSPL8            <---------YAB1  ---------->DOF2 <------   gtttaatttgtggggtacaattagctcgttattgtaccatgcacaagtagaaaataaactcaccatcatttcattataaataaaggttgatctcttaagc  11096300                                                      <---------ICU4                                                     <---------YAB1                                                   --------->YAB1                                                   <---------ICU4          --------->ANAC46                        --------->ICU4                  <---------DAG2        --------->ANAC58    *TSS                --------->YAB1                    <----------DOF2        --------->ANAC58    <------------CBF    <---------ICU4                   --------->TOE2(3)        --------->ANAC46  <-------TEIL         --------->ICU4              <---------ICU4 <-----------GT1      <-------TEIL           --------->YAB1                --------->YAB1 ----At4g35610    <-------TEIL            ----------->GT1           <---------ANAC58       <---------At4g35610 ---TOE1(3)----------->RAV1(1)       ---------->DOF2 --------->ICU4 <---------ANAC58      --------->ANAC46   ttatttcttcacacaacacatacatacatacattgaaaacaaagtagtaataatcatcatggctaagtttgcttccatcatcacctttatctacgctgct  11096400                                              --------->AHL20(2)                                              <---------AHL20(2)                    <--------P               --------->AHL20(2)                         --------->ANAC46              <----------DOF2                --------->YAB1       <---------MYB59       --------->ANAC58            <---------At4g35610    <---------YAB1                --------->ANAC55(2)    --------->ANAC58          <-----------------AG   --------->YAB1                --------->AHL20(2)    --------->TOE2(2)      <----------DOF2<XXXXXXXXXXXXXXXXXXXXMIR400          <-------TEIL         ----------->GT1 ---------->ID1   <---------MYB46(3)--------->YAB1     --------->ICU4          <---------REM1(1)    <   cttgttctctttgcagcttttggttagtaatgctcttataatatgaattaaaatgtaatgttcatttacataactagagagatgtaacatacgcagaagt  11096500                                                                                         <---------ZAT14                                                                                         --------->ZAT14                                                                                         --------->ZAT18                                                                                         <---------ZAT18                                                               <---------ARR14(2)    <---------ICU4                                       --------->ALFIN1        --------->ARR14(2)  --------->GLK1(2)                                     <---------O2            --------->LBD16      --------->YAB1                                     --------->O2           <---------ANAC46    --------->ANAC58                                --------->ANAC58           <---------LBD16      --------->ANAC58 ------>MYB83                   --------->ANAC58     <------ZmHOX2a(1)      --------->AtLEC2 ------>MYB46(1)            <---------HSFB2a(2)   <-----------RAV1(2)       --------->ANAC58     ---- <<<<<<<<<<<<<<<<LFY        --------->HSFB2a(2) <-----------HVH21           --------->ANAC58     ----   accaacaatggtggaagcacagaagttgtgcgagaagccaagtggtacttggtcaggagtttgcggaaacagcaatgcatgcaagaatcagtgcattaac  11096600                                                                 <---------TOE1(2)                                                           <---------ANAC58                                                           <---------bZIP60(1)                   ------>ZmHOX2a(2)                       <---------ANAC55(2)                 ------->TEIL                      <---------ARR14(2)                 <---------AGP1                    --------->ARR14(2)                 <---------ARR14(2)                ------->TEIL  <---------TOE2(2)                 --------->ARR14(2)               <---------CCA1(2)                 --------->ARR11(3)      <---------ZAT18   --------->bZIP60(1)    <------ZmHOX2a(1)                  <---------At4g35610 <---------ANAC58    ======================HOX2a_HOX2a  --------->At4g35610 --------->ANAC55(2)         <---------TOE1(2) ----->TOE2(3)   <---------ARR11(3)    --------->ZAT2   <---------MYB52(1)           <----------DOF2 ----->TOE1(3)  <---------CCA1(2)      <---------ZAT2  <-----------HVH21  <-----------GT1    <-------   cttgaaggagcaaaacatggatcttgcaactatgtcttcccagctcacaagtgtatctgttacgtcccatgttaatttaccaattttctttggttcttta  11096700                                                                                        <----------DOF2                                                                                    ----------->HVH21                                                                                  <---------ANAC58                                                                                  <---------ANAC58                                                                                <------MYB46(1)                                                                                <------MYB83                                                                                <---------ANAC58                                                                                <---------ANAC46                                                                                <---------ANAC58                                                                               --------->MYB111(1)                                                                               <---------AtMYB61   --                                                                       <---------AHL20(2)       -----                     --------->YAB1                         ------->TEIL       --------->MYB46(2)<---             <---------AHL20(2)                            <---------AtLEC2    <---------MYB46(3)----         <---------AHL20(2)                              --------->ANAC58   --------->ATHB12 -------- ---DOF2 --------->AHL20(2)              <---------YAB1  --------->ANAC58 <---------TOE2(3)  <-------   tcgatgtgtatttatatttttaaaaataagtctgtgtcattctatgagtgacttaaggcatgcatgtttatgttttaatgtttggtgtgacttttctata  11096800  Previous    Next  AGI:  At2g26020.1    Description:  PDF1.2b (plant defensin 1.2b). Identical to Probable cysteine-rich antifungal protein At2g26020 precursor [Arabidopsis Thaliana] (GB:O80994); similar to PDF1.2c (plant defensin 1.2c) [Arabidopsis thaliana] (TAIR:AT5G44430.1); similar to PDF1.2 (Low-molecular-weight cysteine-rich 77) [Arabidopsis thaliana] (TAIR:AT5G44420.1); similar to putative plant defensin PDF1.3 [Arabidopsis halleri] (GB:AAY27738.1); contains InterPro domain Gamma thionin; (InterPro:IPR008176); contains InterPro domain Knottin; (InterPro:IPR003614) Range:  from: 11096328    to: 11096675    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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