Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <---------DAG2                                 --------->TOE2(3)                                 --------------->AGL15                            <----------DOF2                            <---------DAG2                           <---------ANAC58                           <---------ANAC58                      <-----------RAV1(1)       ------->TEIL              --------->ARR14(2)                    --------->YAB1<----------DOF2                        <---------MYB52(1)      ----                   <-------TEIL ----------------->AGL1                  --------->LBD16    --------->YAB1             --------->ANAC58   ----------------->AG<-----------GT1    --------->LBD16     <---------ICU4             --------->ANAC46   <-----------------AGL1                <---------LBD16      --------->ATHB12 ---------->GT1<---------ARR11(3)<---------------AGL15       <-----------GT1              <---------YAB1 -MYB52(1)   --------->ANAC58  <-----------------AGL1       <-----------GT1               --------->ICU4   cgaagttatataaccaagacattcatgttgcttttcctttatgggctatgtatatcacggtttttccagtttcccggtttttcaaaatcgttatcattgc  11094000                                            --------->ZAT14           <---------ICU4                 --------->YAB1        <---------ZAT14          <----------DOF2     ------>NtERF2       ---------->DOF2    <---------ZAT14    <---------ANAC58 --->TEIL       <-------TEIL           --------->ZAT14         <---------ANAC58     <----------DOF2   atctcgacaccgataagattcatagcttaaagttttgtcgatgcactgaagtttgagttgtttttgctttcatgtttactttggacctttaaaactggtt  11094100                                    <---------ARR11(3)                                    --------->ARR11(3)                                 <---------TOE2(3)                                --------->YAB1                           --------->ICU4                       <---------ZAT14                       --------->ZAT18                       <-------TEIL--------->YAB1                   <---------------AtSPL8              ----------->GT1                   --------------->AtSPL3<---------AHL20(2)                  <---------DOF5.7(2)    <-----------GT1           --------->YAB1           --------->ARR11(3) <---------WOX13(1)--------------->AGL15           --------->GLK1(2)  <---------YAB1   --------->TOE2(3) ------->TEIL     ----------->GT1   --------->ZAT14<---------ICU4 ---------->DOF2 --------->At4g35610   ttgcaatctgtaaaatctgtaaacgtacactgattaatgatatttacattcttagaaaagaaaaatgaatcatcagcccatgtgaacatatcgaacaatg  11094200                                                                                             --------                                  <---------ANAC58                                          ------>MYB83                                 <---------At4g35610                                        ------>MYB46(1)                             <----------CDC5                                               --------->ANAC58                       --------->DEAR3(1)                                          <------NtERF2                       ------->GAMYB                                              --------->LBD16                      <---------MYB55(2)                                         <---------ANAC58                      --------->DEAR3(2)         <------ZmHOX2a(2)               <---------ANAC58                      --------->MYB46(3)        <---------AGP1                   <---------ANAC46               ----------->RAV1(1)<---------ANAC58            --------->YAB1    <---------LBD16         ---------->DOF2    <------NtERF2       --------->ARR11(3)      --------->YAB1     --------->ANAC58   <---------DAG2--------->ANAC46--------->At4g35610       <----------DOF2    --------->ALFIN1   <----------DOF2  --------->MYB52(1) --------->TOE2(3)<------NtERF2---------->DOF2       --------->ANAC46   tagcactttctcaaagccaacacaaccgcccgcttagcttacattagatagatcaggcagcctttcatatgtaaagataagtggcggagaaaccagccat  11094300                              <--------HAHB4                              --------->YAB1                                                   ------                              --------->ATHB12      --------->ARR11(3)                       <-------                             <---------ATHB12       <---------ARR11(3)                       --------                    <---------CCA1(2)          --------->AHL20(2)                        --------->ZAT14                --------->ARR11(3)        <---------TOE2(3)                              --------->ZAT18                <---------ARR11(3)       <-----------GT1        --------->AtLEC2         <---------ZAT18     --------->ATHB12        <---------YAB1<---------YAB1  ----------->HVH21 --------->ZAT6  ======== ->MYB46(3) <---------WRKY38(1)--------->TOE2(3)<---------AHL20(2)  ---------->DOF2      <---------ZAT14   caactattgattagtcaacatcttatcttctatcattagctatttacgatttaatatctacttgacatgtaaaagactaactcttcaccagttcactata  11094400                                   --------->ANAC46                                   --------->ANAC58                                 --------->YAB1                                   --------->ANAC58                                 <---------ICU4                                <---------REM1(2)          --------->ATHB12        <---------YAB1                                --------->ZAT14           <---------AHL20(2)       --------->ICU4                                <---------ZAT14           --------->AHL20(2)    <---------AHL20(2)        --------->ARR11(3)  --------->ZAT6              <---------------AGL15  --------->AHL20(1)      <-------TEIL   --------->ARR11(3)                 --------->TOE2(3)----------->GT1     <--------P      <---------ARR11(3)                 --------------->AGL15  <---------AHL20(2)   -  <---------TOE2(3) <---------CCA1(2)                  ============================================== ----->TBP<------------CBF*TSS--------->ANAC46         <-----------------AGL3  <---------AHL20(1)<--- --------AGL15     ----------->ARR10      <-------TEIL <-----------------AGL1  --------->AHL20(2)---- ------->AGL15<---------YAB1--------->ANAC46          <-------TEIL     ---------->DOF2           ---- =======================================================================MADS_MADS--------->YAB1  <---   aatagaggttgatattgtgcttatatcttcacactacacacaaatacatacaaacatacattaattggaaactgaaagtaatataatcatggctaagtct  11094500                                                                      <---------YAB1                                                                     --------->AHL20(2)     <---------ICU4                                          ------>ZmHOX2a(2)          --------->AHL20(1)     --------->YAB1                                        --------->ARR11(3)           <---------AHL20(2)    --------->ICU4                          <----------DOF2<---------ARR11(3)           <---------AHL20(1) ----->NtERF2                            <---------------AGL15     <---------AHL20(2)   --------->AHL20(2) ========================================================MADS_MADS--------->YAB1       --------->AHL20(2) ------At4g35610                       <---------At4g35610--------->YAB1     <---------AtLEC2 ----->At4g35610     <---------At4g35610<-----------------AGL2   <---------YAB1        <---------AHL20(2) ----->ZAT2     ------>ZmHOX2a(1)   <----------DOF2      --------->ICU4 <---------AHL20(2)          < ------ZAT2<----------DOF2     ---------->ID1         XXXXXXXXXXXXXXXXXXXX>MIR823  --------->AHL20(2)   gctgccatcatcactttcctcttcgctgctcttgttctctttgctgcttttggtgagtaatgatcttataatattatatgcatgaaaaaataaattctga  11094600                                             ------->TEIL                                    <---------AHL20(2)                                <---------RVE1(1)                                                ----              --------->ATHB12 --------->ARR11(3)                                              ------              <---------AHL20(2)<---------CCA1(1)    <---------ABI4(2)                         <-----      <----------DOF2          <---------ARR11(3)   --------->ANAC58                      --------->ANAC58    ------>ZmHOX2a(1)          <---------AHL20(1)   --------->ANAC58                      --------->ANAC58 <-----------GT1         <-----------GT1  <---------YAB1     --------->YAB1           <---------HSFB2a(2) -----------GT1   ----------->GT1   --------->AHL20(2)      <---------ATHB51          --------->HSFB2a(2)   attttcctctttagatttattggtaattaacaagatatttatatatgaatgcagaagcaccgataatggtggaagcacagaagttgtgcgagaagccaag  11094700                                               --------->ZAT14                                               --------->ZAT18                                               <---------ZAT18                                               <---------ZAT14             --------->ARR11(3)                     --------->ARR14(2)    <---------ICU4                  ------->TEIL                     <---------ARR14(2)  --------->GLK1(2)                 <---------AGP1                   --------->LBD16      --------->YAB1                     <---------ARR14(2)                  <---------ANAC46    --------->ANAC58                     <---------ARR11(3)      <-      <-----------HVH21               --------->ANAC58          <------NtERF2------>ZmHOX2a(2)   <--- ----->ALFIN1    <---------LBD16<---------ANAC58               ----------->GT1                   ---- --->O2    <------ZmHOX2a(1)    <---------ANAC46       --------->TOE1(3)   --------->ARR14(2)    ---- ----O2 <-----------RAV1(2)     <---------ANAC58       --------->TOE2(3)  <---------CCA1(2)      <---   tggtacttggtcaggagtttgcggaaacagcaatgcgtgcaagaatcagtgcattaaccttgagggggcaaaacatggatcttgcaactatgtcttccca  11094800                              --------->At4g35610                       <---------TOE1(2)         ------->TEIL  <---------TOE2(2)         --------->ARR14(2)   <---------At4g35610         <---------ARR14(2)  --------->ANAC58        <---------CCA1(2)    --------->ANAC58      <---------YAB1 --------ZAT18        --------------->AGL15      --------->YAB1                   --------->AHL20(2) ------ZAT2          ----------------->AGL3     <---------ATHB12    <---------ANAC46 ----->At4g35610 <---------ANAC58               <---------ATHB51    <---------ANAC58 ----->ZAT2   <---------MYB52(1)      <---------ATHB12       <----------DOF2 <-----------GT1 ------At4g35610 <---------ANAC58-------->P   --------->WOX13(1)    <---------ANAC58        <--------   gctcacaagtgtatctgttacttcccatgttaagctaccaatgactaccaattatacttggtgcttcatggtgtgtattttacataaaataagtctttgt  11094900  Previous    Next  AGI:  At2g26010.1    Description:  PDF1.3 (plant defensin 1.3). Identical to Probable cysteine-rich antifungal protein At2g26010 precursor [Arabidopsis Thaliana] (GB:O80995); similar to PDF1.2c (plant defensin 1.2c) [Arabidopsis thaliana] (TAIR:AT5G44430.1); similar to PDF1.2 (Low-molecular-weight cysteine-rich 77) [Arabidopsis thaliana] (TAIR:AT5G44420.1); similar to PDF1.2b (plant defensin 1.2b) [Arabidopsis thaliana] (TAIR:AT2G26020.1); similar to putative plant defensin PDF1.3 [Arabidopsis halleri] (GB:AAY27738.1); contains InterPro domain Gamma thionin; (InterPro:IPR008176); contains InterPro domain Knottin; (InterPro:IPR003614) Range:  from: 11094426    to: 11095022    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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