Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <-----------GT1                                          <---------AHL20(2)                    <---------YAB1                            <----------ID1--------->AHL20(2)         ------>MYB46(1)                        ---------->DOF2  <---------AHL20(2)          ------>MYB83--------->YAB1                    --------->ZAT14      <---------AHL20(1)        <---------MYB46(2)                    <---------ZAT14  --------->AHL20(2)            <---------MYB111(2)      --------->YAB1--------->At4g35610  --------->AHL20(2)        <---------MYB59 ------ZAT14      --------->ANAC46 ----------->GT1                 <---------MYB111(1) ----->ZAT14    --------->ANAC46 ---------->DOF2                  --------->ANAC46  ----------->GT1   tcactgtttcataaaaacacacagcacaaagtgacaaaagtaaattatttacaaacacattagtctctaccaaactattgaaatgatagtaaaaatacga  11072700                      --------->DAG2                  --------->ANAC46                  --------->ANAC58               <-------TEIL                                                                     <----         --------->MYB52(1)                                         --------->ATHB12    ----------->GT1       ----------->HVH21    --------->ATHB12                       <---------TOE2(3)    --------->YAB1       ------->GAMYB ---------->DOF2                       --------->ANAC58         --------->ICU4<--     --------->At4g35610   <-------TEIL                    --------->ANAC58        --------->ANAC58  <---------YAB1  --------->ANAC58             --------->YAB1      <---------YAB1  --------->ANAC58   tgttatcatccgaccggttcacgaaaagcttcattgtctaaaaaaacactcacaacatggaacgaaactaagattggactatagcaagaattgtaactaa  11072800                                                                        ----------->RAV1(1)                                                                      --------->LBD16                                              --------->At5g28300    --------->ANAC46                                             ----------->GT1         --------->RAP2.6(2)                                           --------->At4g35610       --------->ANAC58              --                                           <---------At4g35610       --------->ANAC58              <-                                      <---------ANAC58           ---------->DOF2                   <- -----YAB1                            <---------AtLEC2         --------->LBD16                     -- -------ICU4      <---------WOX13(1)  <---------ANAC58        --------->ANAC46        <---------YAB1   tattgacaaaactaaattagattgacttaaaacaaaacttgcatgagctgtaaattttcaaaacccgaaaaccgcaacattttttgatatgatcaagaga  11072900                                                 <------NtERF2                                                ------>NtERF2                                               --------->DEAR3(1)                                               <---------DEAR3(1)                                               ----------->HVH21                                              --------->ATERF1(1)                                             --------->LBD16                                             <---------ATERF1(1)                                            --------->TOE1(2)                                           <---------LBD16                                           --------->ATERF1(1)                                           ------>ZmHOX2a(2)                                          <------ZmHOX2a(2)                                         --------->ARR14(2)                                         <                                    ----------->RAV1(2)                                             -           <---------ANAC55(2)      <---------At4g35610                                         <----           --------->ANAC55(2)  --------->ARR14(2)                                           <------- ------->ARR11(3)      <---------ICU4    <---------ARR14(2)                                 <-------- ----------ARR10      <---------YAB1--------->At4g35610     <---------ZAT18              <---------MYB52(1) --------ARR11(3)  <---------YAB1   --------->LBD16       --------->At4g35610           <---------At4g35610 ------->GLK1(2)----------->TGA1<---------ARR14(2)      --------->MYB46(3)--------->YAB1<-------GAMYB   aaatcttatcgatacctgatgacgataattccagtatccgctggatccggcgacgagaacagcccacttagtagaatcatcgtcgttttcagttgggcgg  11073000                                                --------->RAP2.3(1)                                               <---------RAP2.6(1)                                               ------>NtERF2                                               <---------DEAR4(2)                                         --------->MYB52(1)                                        <---------ARR14(2)                                        --------->ARR14(2)                                      --------->ANAC46                                    --------->At4g35610                                 --------->TGA2(2)                                <-----------TGA1<------NtERF2                                <-----------HVH21--------->DEAR3(1)                               --------->bZIP60(2)                               <---------bZIP60(2)                               <---------ANAC58<---------ATERF1(1)                               --------->ANAC55(2)                               <---------ANAC55(2)                                                  <                               ====================================bZIP_DOF                         <                               <---------bZIP60(1)      ---------->DOF2                             <                               --------->bZIP60(1)------>NtERF2                                    --                               <---------O2    <---------RRTF1(1)                                  --                               --------->O2    <---------ORA47(2)                                  --                               --------->TGA1a<---------RAP2.3(3)                                  --                               <---------TGA1a<---------DEAR3(1)                                   --                               <---------TGA2(1)--------->ATERF1(1)                               <--                               --------->TGA2(1)--------->ORA47(2)                               <---                               --------->ANAC46<---------ERF1                                 -------                               <<<<<<<<<<HY5  --------->DEAR3(1)                           <---------YAB1                               <---------ANAC58<---------RAP2.3(1)                      --------->ALFIN1 ---------ARR11(3)            <-----------STF1<---------ANAC46                       <---------DEAR3(1) -------->ARR11(3)            ----------->STF1<---------RAP2.3(2)                  --------->MYB52(1) --NtERF2                    <---------TGA2(2)<---------RRTF1(3)                  ----------->HVH21-- --LBD16                    ----------->TGA1 <---------ABI4(1)<------ZmHOX2a(1)  --------->DEAR3(2)<- -ANAC46          ----------------------->TaNAC69(2) --------------->AGL15---------->DOF2<---------MYB46(3)   aagaacttagaagctagagaaggaagtttgatgacgtcaccagaaacggcggcgactagaaagaggaagagggcgagaaaggaaacgacggtggtcattg  11073100                                         <---------HSFB2a(1)                                         --------->HSFB2a(1)                                        --------->ARR11(3)                                        --------->GLK1(2)                                        --------->ARR14(2)                                        <---------ARR11(3)                                        <---------ARR14(2)      *TSS                   <---------ANAC55(1)                           --------->YAB1 ---------ANAC46             <---------O2--------->HSFC1(2)              <-----------TBP ------MYB46(1)              <---------ANAC46                        <---------At4g35610 ------MYB83                 --------->TGA1a                      --------->ATERF1(1) ------->MYB111(2)           <---------ANAC58                    --------->ARR14(2) ------->MYB52(2)            <---------ANAC58                    <---------ARR14(2) ------->MYB46(2)            --------->O2<---------HSFC1(2)    <------NtERF2                       <- ------->MYB111(1)           <---------bZIP60(2)               --------->ATERF1(1)            <------ ------->MYB59               <---------TGA1a                  --------->LBD16             ----------- -------MYB55(1)          ----------->TGA1                   --------->ALFIN1       <-----------GT1-- ------MYB52(1)           ----------->HVH21                  <---------ANAC46      --------->AHL20(2) -->ICU4   <-----------RAV1(2)         <---------GLK1(2)     <---------ANAC58 --------->AHL20(2)  <-- ------->MYB55(2)        <-----------HVH21  <---------LBD16  <---------DEAR3(1)    <---------AHL20(2) --------AtMYB61        --------->ALFIN1<-----------ARR10    <---------ANAC58 <---------AHL20(2) ----   ttaggtggtattctcaggcgaagaaggtgtgacgtggataagaatcttcggagagaagacgaggcggggtctgctatttataaattttaatattcaatga  11073200                                             <---------REM1(2)                                        <<<<<<<<<GATA-1                                 --------->GLK1(2)                               <---------ANAC46               <-------TEIL           --------->ARR11(3) <---------YAB1                <---------ANAC58 --------->ANAC46                --------->AHL20(2) --------ICU4                  <---------ANAC58 --------->ANAC58               <---------YAB1 ---ATHB12                  <---------MYB52(1)  --------->ANAC58            <---------AHL20(2) ->CBF       --------->ANAC58  <---------ANAC55(2)            ------->TEIL  --------->AHL20(2) ------->YAB1--------->ANAC58  <---------ANAC55(1)        --------------->AtSPL8--------->YAB1 -------ATHB12  --------->MYB52(1)     <-----------GT1    <---------------AtSPL8-------->HAHB4   ---- --->TEIL    --------->ANAC46  --------->ANAC55(2)  ----------->GT1<---------AHL20(2)<---------ARR11(3)   atcattcttatgccaacgtaacgcttggccattacttgttttatctatacacgctagtaaaatgtacattttttttttttaattatagatattctgtttt  11073300                                                                        <---------AHL20(2)                                                                       <---------AHL20(2)                                                                       --------->AHL20(2)                                                                   --------->AHL20(2)                                                            <---------AHL20(2)                                         --------->ICU4    --------->AHL20(2)         ---------->DOF2          <-----------GT1          <---------AHL20(1)    --------->ANAC58         --------->AHL20(2)            <---------AHL20(2)    --------->ANAC58         <---------AHL20(2)  --------->DAG2    <---------AHL20(2)       ---------    <----------ID1          --------->AHL20(2)  ---------->DOF2  --------->TOE2(3)  <----------DOF2  ---------->DOF2       ---------->ID1------>ZmHOX2a(1)    --------->AHL20(1)<-----------RAV1(1) ------->GT1        <----------DOF2  <---------MYB59 ----------->GT1<---------AHL20(2) --------->AHL20(2)   agttaaaagccaaaagtattggctttgtcatttaattttcctaatttttaaaaagttgtaatttattcattaattttatatgtggtcttttaaatcgtga  11073400                                         <---------ARR11(3)                                       <--                                         --------->AGP1                                           ---                                  ----------->HVH21                                               ---                                  --------->WRKY12                                               <xxx                                  --------->WRKY38(1)                                            <---                                  --------->WRKY45                                             <-----            --------->ICU4    <-------TEIL<------ZmHOX2a(2)                                   <------ <---------YAB1  --------->AHL20(2)<---------WRKY18(1)                                       <------- <---------TOE2(3)       <---------AHL20(2)           --------->ICU4             <xxxxxxxxxxxxxxxxxxx -->GT1----------->GT1  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <---------MYB46(3)--------->ZAT6   attaacattgagtaatttttaaaatataaaaattcgttgaccagatcaaaatagacatgatgttatcagttgttaatgcaatctctaacactcatttacg  11073500                                                                                             --------                                                                                            ---------                                                                                           --------->At4g35610                                                                                           <xxxxxxxxx                                                                                          <xxxxxxxxxx                                                                                          <xxxxxxxxxx                                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                <xxxxxxxxxxxxxxxxsmallRNA(i)<--------                                                                --------->WRKY38(1)    <---------ARR14(2)                                                               --------->DOF5.7(2)     --------->GLK1(2)                                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)            <----------DOF2                                 xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        <---------WRKY38(1)                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)        xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <---------YAB1               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)-------- -------ARR14(2)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)--------->WRKY45  --------->ANAC46 ------>GLK1(2)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)--------->WRKY12xxxxxxxxxxxxxxxxxxxxx ------>ARR14(2)       <-----------GT1           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->ARR14(2) xxxxxxxxxxxxxxxxxxsmallRNA(si3)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ------GLK1(2)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ----YAB1xxxxxxxxxxxxxxxx>smallRNA(i)   <---------TOE2(3) <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)-------- ---TOE2(3)xxxxxxxxxxxxxxxx>smallRNA(i) <---------TOE1(3)xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxxxx ----GT1<---------WRKY45  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxsmallRNA(se3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     -   attctgctagtcaactttcaaattgtgaccattttgaacatcaaggttattcaaaacatgaaaacgttgactaccatttgaaacacgagaatccgttgac  11073600  Previous    Next  AGI:  At2g25940.1    Description:  ALPHA-VPE (ALPHA-VACUOLAR PROCESSING ENZYME); cysteine-type endopeptidase. Identical to Vacuolar-processing enzyme alpha-isozyme precursor [Arabidopsis Thaliana] (GB:P49047;GB:O82806); similar to GAMMA-VPE (Vacuolar processing enzyme gamma), cysteine-type endopeptidase [Arabidopsis thaliana] (TAIR:AT4G32940.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70603.1); similar to unnamed protein product [Homo sapiens] (GB:BAC86022.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43774.1); contains InterPro domain Peptidase C13, legumain; (InterPro:IPR001096) Range:  from: 11070379    to: 11073106    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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