Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <---------ZAT2                                                                         --------->At4g35610                                                                     ------>ZmHOX2a(2)                                                                    <------ZmHOX2a(2)                                                                    ===================HOX2a_HOX2a                                                              --------->MYB52(1)                                                             ----------->HVH21  ------>ZmHOX2a(1)                                                       --------->GLK1(1) <---------At4g35610                                                       <---------GLK1(1) --------->GLK1(1)                     ------>ZmHOX2a(2)             --------->HSFB2a(2)   --------->ZAT2                   <---------ARR11(3)              <---------HSFC1(1)==================HOX2a_HOX2a                   --------->ARR11(3)             <---------LBD16  <---------ARR14(2)             --- ----->ARR11(3)<---------AtLEC2             <-----------------AGL1 --------->ARR14(2)             <-- -->DOF2     <---------YAB1       <---------GLK1(2)<---------HSFB2a(2)   <---------GLK1(1) <-------GAMYB   aaattgtttcagtttatgcatgatcttcaacttccatattcttgttttcaattctggaaatccctaacagatcggagctctcctcattcagtgagttgga  11065700              <---------ICU4             <---------YAB1             --------->AHL20(2)             <---------AHL20(2)                                                         --------->ANAC58         --------->AHL20(2)                                                             --------->ANAC46        <---------YAB1                                                                  --------->ANAC58      --------->ATHB12                                                           --------->ARR14(2)     <---------YAB1                           <----------TaMYB80                 --------->ARR11(3)     --------->ICU4                          <---------AHL20(1)                  <---------ARR11(3)   <---------ANAC58                          <---------AHL20(2)                  <---------ARR14(2)   <---------ANAC58                          --------->AHL20(1)                  --------->GLK1(2)   <---------AtLEC2                         --------->AHL20(2)                  <---------GLK1(2) ------>HSFB2a(1)                      <-----------GT1                      ---------->DOF2 -------HSFB2a(1)<-----------GT1   --------->AHL20(1)                 ------->GAMYB     --------->ANAC55(2)   agattgcatgattatataattactcttcacatccacatatattacattatattcccctataatttcatacaaccctagaaaagaatcttcaagtaatcta  11065800                        --------->HSFB2a(2)                        <---------HSFB2a(2)                <---------ATHB12             <---------ALFIN1                                                                       <            --------->ZAT18                                         <----------DOF2        --------->ICU4            <---------ZAT18             --------->MYB52(1)       --------->GLK1(2)   --------->ANAC46            --------->ZAT14   ----------->GT1          <---------At4g35610          ---------->DOF2 -            <---------ZAT14 ---------->DOF2            --------->At4g35610    <---------ICU4    -----   atcgtgtcgatgactccactcatttgctagaaaagaaaaaacaaacagacttcatttagctgaaaacaatcttttattcaacattacaaagcactgatca  11065900                                   <---------ANAC55(2)                                   <---------ANAC58                                   <---------ANAC55(1)                                   <---------ANAC58                                   --------->ANAC55(2)                                  <---------TOE2(3)                    --------->ARR11(3)                    <---------ARR11(3)                   <---------CCA1(2)        ---------->DOF2                  <---------ARR11(3)     --------->TOE2(3)                  <---------AHL20(1)  ------->TEIL      ----------->HVH21  ----------->HVH21------>ZmHOX2a(1) ------->TEIL     <---------AHL20(2)  --------->ARR14(2) ---------GLK1(2) --------->ARR11(3)  <---------ARR14(2)      <---------ANAC46            <----------DOF2 -------->ARR14(2)--------->AHL20(1) <---------CCA1(2)  --------->DAG2                    =========== ----->DOF2 ----------->GT1      <-----------GT1       ---------->DOF2                 <-----------GT1   aagaacctctaacatggtaatatatctatgacattttacgtatcctaaaagaaaacaaaaagtgatgtattggatgatgttttttttttttactttctag  11066000                                     ------->TEIL                                  --------->ANAC46                                  --------->ANAC58                                  --------->ANAC58                                  --------->ANAC55(2)                                  <---------ANAC55(2)                                             ===                              <-----------HVH21                                                   ---                             <---------bZIP60(1)                                                 ====                             --------->bZIP60(1)                                                 <---                          --------->O2                                                          -----                          <---------O2                                                          <----                          --------->TGA1a                                                       -----                          --------->bZIP60(2)     ----------->GT1                               <----                          <---------TGA1a       ----------->GT1                                 -----                       --------->ZAT18 <---------DAG2                                           -----                       <---------WRKY38(1)     <---------AtMYB61                                <----                       <---------ZAT18 <----------DOF2 --------->AHL20(2)                      ------                ---------->DOF2<---------REM1(2)<---------MYB46(3)                  --------->ARR11(3)           ------->GAMYB  --------->ANAC46     <---------DEAR3(1)                   <---------ARR11(3)           =========================MYC_MYB<---------LBD16                         --------->RVE1(1)           ----------->RAV1(1)<-----------TGA1 --------->ALFIN1                  --------->YAB1<-----          <----------ID1  ========================bZIP_DOF               <---------AHL20(2)   ------- <---------YAB1 ====================bZIP_DOF  <---------MYB52(1)        --------->AHL20(2)--------->LBD16 ===================================bZIP_DOF --------->LBD16        ----------->GT1--------->CCA1(1)-   tttcttattacaacgacaaaaagagtccacgtcgtcacgcacttttccggtggtgaaaaaaatgtccaaatggattaaatctataatatctccagagaga  11066100        <---------CCA1(2)     ------>ZmHOX2a(1) ===========HOX2a_HOX2a --->ZmHOX2a(2) ===========HOX2a_HOX2a ---ZmHOX2a(2) ---->ARR14(3) -----ARR14(2) ---->AGP1                                      <----------DOF2 -----GLK1(2)                         <----------DOF2                                               < ---->ARR11(3)                  ------>ZmHOX2a(1)                                                   < ---->ARR14(2)            <----------DOF2      <---------DAG2                             ------->TEIL -----ARR11(3)            <---------DAG2    ---------->ID1                               <---------CCA1(2) --->GLK1(1)           <---------ALFIN1   <-----------GT1          --------->ANAC46  ------>ZmHOX2a(1) ----GLK1(1) *TSS   <---------TCP20   <---------DAG2               --------->ANAC58  <---------At4g35610 ---->ARR10 <----------DOF2     <---------CCA1(2)                  --------->ANAC58  --------->At4g35610 ----->ZmHOX2a(1)   --------->PCF2<---------CCA1(2)  ------>ZmHOX2a(1)  <---------At4g35610     -----   tcctctccttctatctttttgggctccacttttcctatctctttttgcccctttcctctctctgttcacaagtcatcttcttccttcctctgaatcttgt  11066200                           ------>MYB83                           ------>MYB46(1)    <-----------GT1       <---------ALFIN1                                                    <------ ----------DOF2          <---------MYB55(2)                                       <----------DOF2 ---------DAG2           --------->MYB46(3)                     <------------------------ANAC81 ----->ID1            <-----------GT1--------->HSFB2a(2)     <----------DOF2    ------>ZmHOX2a(1)   tcctttttgctctctctacttgattcacccactctgtttctcgattagtacgttgaaaactcactttggttttgtttgattcctctttagtctgtttttc  11066300                                ------>ZmHOX2a(2)                               <------ZmHOX2a(2)                        <---------MYB46(3)                     <------MYB83                                             <---------ANAC46                     <---------ANAC46                                      <---------AtMYB61                     <------MYB46(1)                          <---------RVE1(1)                    <---------MYB46(3)                        <---------CCA1(1)                    --------->MYB111(1)                      <---------AHL20(1) <------MYB46(1)                    --------->MYB55(2)                       <---------ARR11(3) <------MYB83                    --------->MYB46(2)         ---------->ID1--------->ARR11(3)<---------MYB46(3)                <------MYB83   ==========================HOX2a_HOX2a       <---------MYB46(3)                <------MYB46(1)--------->GLK1(1)   <---------MYB52(1)     <---------WOX13(1)              <---------WOX13(1)=========================HOX2a_HOX2a    --------->ATHB12            --------->ATHB12  --------->ARR11(3)  ------>ZmHOX2a(1)    <---------YAB1  <---------ANAC58  <---------AtMYB61 --------->YAB1       <---------TOE2(3)<------MYB46(1)  <---------ANAC58  --------->MYB111(2)  <---------TOE1(2) ----------->ARR10<------MYB83 -----GT1  <---------YAB1     <---------ARR11(3)  <----------DOF2 <---------AHL20(2)    <---------AHL20(2)   gatttcgttttctctgattggtttggtggtgagatctctatcgtagtttgtcctttgggttaagatatttcatttgattggtgggtttgttttattgaag  11066400                                           -------->ATHB1                                           --------->ATHB51                        --------->MYB52(2)                                           <---------ICU4                      <------MYB83                                           <--------HAHB4    <---------ARR11(3)----------->GT1                                  <---------TOE2(3)          <---------GLK1(2)--------->MYB46(2)                                  <---------TOE1(3)          --------->ARR11(3)<------MYB46(1)         ---------->DOF2          --------->MYB59   ---------->DOF2  <---------ANAC46 <---------YAB1      <----------DOF2      --------->ICU4   ----------->ARR10  --------->MYB59 <------   cttattgttgtgaaagttggagtctttctcagtttttaggttgaattattaagagaaagggaagatttttggtgtgaagttaggttatttggggtttgag  11066500                                                                      --------->TOE2(2)                                                            <---------ARR14(3)                                                            --------->ARR11(3)                                                            <---------ARR14(2)                                                            --------->ARR14(2)                                                            <---------ARR11(3)                  ----------->GT1                         ----------->ARR10          <----------DOF2              --------->DAG2                          <------ZmHOX2a(1) <---------TOE2(2)            ---------->DOF2<---------YAB1      --------->ICU4--------->CCA1(2)  ------>ZmHOX2a(1) ---HSFB2a(2) <---------TOE2(3)              ---------->DOF2--------->ARR14(3)  <---------LBD16   aagtttgcaagtgaaaaaggttgtgaattgtgagtgatgaagagagggaaagatgaggagaagatattggaacctatgtttcctcggcttcatgtgaatg  11066600  Previous    Next  AGI:  At2g25930.1    Description:  ELF3 (EARLY FLOWERING 3). Identical to Protein EARLY FLOWERING 3 (ELF3) [Arabidopsis Thaliana] (GB:O82804;GB:O04419;GB:Q8L7A2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G21320.1); similar to early flowering 3 [Mesembryanthemum crystallinum] (GB:AAQ73529.1) Range:  from: 11066113    to: 11070402    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version